Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04460
Subject:
XM_017317740.1
Aligned Length:
1743
Identities:
1398
Gaps:
213

Alignment

Query    1  ATGCTGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGGA  74
            |||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGAGCAGGTTGATGAGCGGCAGCAGCAGGAGTCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGGA  74

Query   75  CGACAGCGAGTACACCTGCACCATCCAGAGAGATGCCAAAGGCCAGTACCTGTTTGACCTTCTTTGCCACCATC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|
Sbjct   75  CGACAGCGAGTACACCTGCACCATCCAGAGAGATGCCAAAGGCCAGTACCTGTTTGACCTCCTTTGCCACCACC  148

Query  149  TGAACCTACTTGAGAAAGACTATTTTGGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGAATTT  222
            ||||||||||||||||||||||.|||||.||.||.|||||.||||||||||||||||||||||||.||||.|||
Sbjct  149  TGAACCTACTTGAGAAAGACTACTTTGGGATTCGTTTTGTGGACCCAGATAAGCAGCGGCATTGGTTGGAGTTT  222

Query  223  ACAAAGTCTGTGGTGAAACAATTGAGATCCCAGCCTCCATTCACCATGTGCTTCCGTGTGAAGTTTTATCCTGC  296
            ||||||||.||||||||.||..||||||||||||||||.|||||||||||||||||.|||||||||||.|||||
Sbjct  223  ACAAAGTCAGTGGTGAAGCAGCTGAGATCCCAGCCTCCGTTCACCATGTGCTTCCGCGTGAAGTTTTACCCTGC  296

Query  297  AGACCCTGCTGCTCTGAAAGAAGAAATAACCAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACCATG  370
            .|||||.|||||.||||||||.||||||||||||||.|||||||||||.|||||||||||||||||||||||.|
Sbjct  297  CGACCCCGCTGCCCTGAAAGAGGAAATAACCAGGTACTTAGTCTTCCTTCAGATCAAAAGGGATCTCTACCACG  370

Query  371  GCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAGCAGCTTACATCCTTCAAGCGGAGATTGGGGATTAT  444
            ||||.||.||||||||||||||||||||.|||||||||||.||.||.|||||||||||||||||||||||||||
Sbjct  371  GCCGTCTTCTCTGTAAAACATCGGATGCCGCCTTGTTAGCGGCCTATATCCTTCAAGCGGAGATTGGGGATTAT  444

Query  445  GACTCAGGGAAA-CACCCTGAAGGCTACAGCTCCAAGTTCCAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAA  517
            ||| |.|||||| |||||||||||||||||||||||||||||.||||||||.||||||||||||||.|||||||
Sbjct  445  GAC-CCGGGAAAGCACCCTGAAGGCTACAGCTCCAAGTTCCAATTTTTCCCGAAACATTCAGAGAAACTGGAAA  517

Query  518  GGAAAATTGCTGAGATTCACAAGACGGAACTGAGTGGTCAAACACCAGCAACATCAGAGCTGAACTTCTTAAGA  591
            .||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.|||||||||
Sbjct  518  AGAAAATTGCTGAGATTCACAAGACCGAACTCAGTGGTCAAACACCAGCAACATCAGAGCTGAATTTCTTAAGA  591

Query  592  AAAGCACAGACATTGGAAACATATGGAGTGGATCCTCACCCATGTAAGGACGTGTCAGGAAATGCTGCATTTCT  665
            ||.||.|||||.||.||.||.||.||||||||.|||||||||||||||||.|||||.|||||||||||.|||||
Sbjct  592  AAGGCCCAGACGTTAGAGACCTACGGAGTGGACCCTCACCCATGTAAGGATGTGTCGGGAAATGCTGCGTTTCT  665

Query  666  GGCCTTCACTCCTTTTGGGTTTGTTGTTCTTCAAGGAAACAAGAGGGTCCACTTCATTAAATGGAATGAGGTGA  739
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  666  GGCCTTCACTCCTTTCGGGTTTGTTGTTCTTCAAGGAAACAAGAGGGTCCACTTCATTAAATGGAATGAGGTGA  739

Query  740  CCAAGCTGAAATTTGAAGGAAAGACTTTCTATTTATACGTAAGTCAGAAAGAGGAAAAGAAAATTATTCTTACA  813
            |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.|||
Sbjct  740  CCAAGCTGAAATTTGAAGGAAAGACTTTCTATTTATATGTAAGTCAGAAAGAGGAAAAAAAGATTATTCTCACA  813

Query  814  TATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCT  887
            ||||||||.||||||||.|||||.||.|||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  814  TATTTTGCCCCAACTCCAGAAGCCTGCAAGCACCTCTGGAAATGTGGAATTGAGAACCAAGCCTTCTACAAGCT  887

Query  888  GGAGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCTTTAAAGGGAGCCGGTTCCGATACAGTG  961
            |||.||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||||
Sbjct  888  GGAAAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCAATTTGTTCTTTAAGGGGAGCCGGTTCCGATACAGTG  961

Query  962  GCCGAGTTGCAAAGGAAGTCATGGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAATACACAGAGCAGGG  1035
            ||||.||.|||||||||||.|||||.||.|||||.|||||||||||||||||.||.||||||||||||||||||
Sbjct  962  GCCGGGTCGCAAAGGAAGTAATGGAGTCCAGTGCCAAGATCAAACGGGAGCCGCCAGAAATACACAGAGCAGGG  1035

Query 1036  ATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAG  1109
            |||||.||.|||||.||||||||.||.|||||||||||||||.|.||||||||||||||||||||.||.|||||
Sbjct 1036  ATGGTCCCTAGCCGCAGCTGTCCTTCTATAACCCATGGCCCACGACTGAGCAGCGTCCCCAGGACACGAAGAAG  1109

Query 1110  AGCTGTTCACATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA  1183
            ||||||.||||||||.||||||||||||||.|||||..||||.|||||||||||||||||.||||||||.|||.
Sbjct 1110  AGCTGTGCACATCTCTATCATGGAAGGCCTTGAGTCGCTACGAGACAGTGCCCATTCCACCCCAGTGCGGTCCT  1183

Query 1184  CTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATT  1257
            ||||||||||||||||||||||||||||||||||||||||||||.||||.||||||||.||.||.||||||||.
Sbjct 1184  CTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGGCAGACAGCAATGAACGTGTCGCTGTGATA  1257

Query 1258  GCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTGTGGCTGAGCACAGCCTGGAGCTGATGTT  1331
            ||.||.||||||||||||||.||||||||.|||||||||||||||||.||.|||||||||||||||||||||.|
Sbjct 1258  GCGGATGAGGCCTACAGCCCCGCAGACAGTGTGCTGCCCACCCCTGTAGCCGAGCACAGCCTGGAGCTGATGCT  1331

Query 1332  GCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACTG  1405
            |||.||||||||||||||.||.|||||.|||||||||||||||||||||||.||.||.|||||||||||.||||
Sbjct 1332  GCTCTCCCGGCAGATCAACGGGGCCACGTGCAGCATTGAGGAGGAGAAGGAGTCGGAGGCCAGCACCCCGACTG  1405

Query 1406  CTACAGAGGTGGAGGCCCTTGGGGGAGAGCTGAGGGCCCTGTGTCAGGGGCACAGCGGGCCCGAGGAGGAACAG  1479
            |.|||||||.|||||||||.||.||||||||||||||||||||||||||||||.|||||.|.|||.|.||||||
Sbjct 1406  CGACAGAGGCGGAGGCCCTGGGAGGAGAGCTGAGGGCCCTGTGTCAGGGGCACGGCGGGTCAGAGCAAGAACAG  1479

Query 1480  GTG-AATA---AGTTTGTTCTAAG--TGTCCTC------------CGTTTGCTCCTT----GTGACCATG--GG  1529
            .|| ||.|   ||...|.|||.||  .|.|.||            ||     .||||    |.|||||.|  |.
Sbjct 1480  ATGCAAGAGAGAGACAGATCTGAGGAAGGCATCGAGAAGGAGCAGCG-----GCCTTGGAAGGGACCAGGAAGC  1548

Query 1530  ACT--------CCTCTTTGTTTTGCTCCTCCTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTT  1595
            |||        ||||                                                           
Sbjct 1549  ACTAAGCAGGACCTC-----------------------------------------------------------  1563

Query 1596  CCGTGATATCCGCCAGACCCCCGAGTTTGAACAATTCCACTATCAATACTTTTGTCCCCTCAGGCGATGGTTTG  1669
                                                                                      
Sbjct 1564  --------------------------------------------------------------------------  1563

Query 1670  CCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACC  1710
                                                     
Sbjct 1564  -----------------------------------------  1563

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