Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_04502
• Subject: NM_001141972.2
• Aligned Length: 833
• Identities: 431
• Gaps: 370

Alignment

Query   1  ATGAGGGTCGCGGCTCTGATCAGTGGTGGGAAGGACAGCTGCTATAATATGATGCAGTGCATTGCTGCTGGGCA  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGAGGGTCGCGGCTCTGATCAGTGGTGGGAAGGACAGCTGCTATAATATGATGCAGTGCATTGCTGCTGGGCA  74

Query  75  TCAGATCGTTGCTTTAGCAAATCTAAGACCAGCTGAAAACCAAGTGGGGTCTGATGAACTGGATAGCTACATGT  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  TCAGATCGTTGCTTTAGCAAATCTAAGACCAGCTGAAAACCAAGTGGGGTCTGATGAACTGGATAGCTACATGT  148

Query 149  ATCAGACAGTGGGGCACCATGCCATTGACTTGTATGCAGAAGCAATGGCTCTTCCCCTCTATCGCCGAACCATA  222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149  ATCAGACAGTGGGGCACCATGCCATTGACTTGTATGCAGAAGCAATGGCTCTTCCCCTCTATCGCCGAACCATA  222

Query 223  AGAGGAAGGAGCTTGGATACAAGACAAGTGTACACCAAATGTGAAGGTGATGAGGTTGAAGATCTCTATGAGCT  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223  AGAGGAAGGAGCTTGGATACAAGACAAGTGTACACCAAATGTGAAGGTGATGAGGTTGAAGATCTCTATGAGCT  296

Query 297  TTTGAAACTTGTTAAGGAAAAAGAAGAAGTAGAGGGGATATCAGTAGGTGCTATACTTTCTGACTATCA-GCGT  369
           |||||||||||||||||     |.|..|.||||      ||.|       |..|.|||.||||.|||.| ||  
Sbjct 297  TTTGAAACTTGTTAAGG-----GCATCACTAGA------ATGA-------CCTTGCTTGCTGAATATGATGC--  350

Query 370  ATTCGAGTGGAAAATGTGTGTAAAAGGCTTAATCTCCAGCCTTTAGCTTATC-------TTT-------GGCAG  429
                                     .||.||||||||      ||.||.||       |||       |||||
Sbjct 351  --------------------------TCTGAATCTCCA------AGATTTTCACATGCATTTGAAAGTGGGCAG  392

Query 430  AGAAACCAGGAAGATTTGCTCAGAG------AGATGA--TATCATCTAACATTCA-AGCAATGATCATCAAAGT  494
                ||||| .|| |||.|.|.||      |.||||  |.|      .||.||| |||||             
Sbjct 393  -----CCAGG-CGA-TTGTTTACAGGACTCCAAATGAACTGT------GCACTCACAGCAA-------------  440

Query 495  AGCAGCTTTGGGTTTAGATCCTGATAAGCATCTTGGGAAAAC----CCTGGATCAAATGGAGCCTTATCTCATA  564
                      |||       ||||||.|         |.||    |||             ||||.|.|||..
Sbjct 441  -----------GTT-------TGATAAAC---------ACACATTTCCT-------------CCTTTTATCAGT  474

Query 565  GAGCTTTCTAA----GAAGTATGGAGTACATGTTTGTGGAGAAGGTGGAGAGTATGAAACTTTCACTTTGGATT  634
           |||.||.|.||    ||||||                                                     
Sbjct 475  GAGATTGCAAAATGTGAAGTA-----------------------------------------------------  495

Query 635  GCCCTCTATTTAAGAAGAAAATAATTGTGGATTCATCAGAAGTAGTCATACATTCAGCTGATGCATTTGCACCT  708
                                                                                     
Sbjct 496  --------------------------------------------------------------------------  495

Query 709  GTGGCTTATCTACGCTTTTTAGAATTGCACTTGGAGGACAAGGTGTCCTCAGTGCCTGACAACTACAGAACATC  782
                                                                                     
Sbjct 496  --------------------------------------------------------------------------  495

Query 783  TAATTATATATATAATTTT  801
                              
Sbjct 496  -------------------  495