Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04637
- Subject:
- NR_046405.1
- Aligned Length:
- 3188
- Identities:
- 1062
- Gaps:
- 2126
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCTAGTGGCGGCAGGTGCAGGTGGCCGCGCGGCATCCTGGGGCTTGCAGTCTCCCGAGCGTTCTGTTGTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTGCCTACAATTTTAGGGAACCTAATAAAAGGGTGGTCGGTATGTTTTTATTTGGGTGTGTACTTTTGTTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCGCTTTTTCGCTATGCATTAAGTACGGACTTTAGGACTCAACTAGTACCAGGAAGAAAAAGACCGGACATTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCACCTGTTTGTTATACAGCGAAGGGGAAAAATTGGGAAGAAATCCTCAAGCTACAAGAAAAATAACCAGAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTACACTTTAGCCTGCAGTGACTTATATCCTGGTGTCCTAAGTCCACCTAAGTCAGTTTTGCAATAAGAGGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCAAGTTTGGTTTTCTTGGAGCTTGCATCAGTTGGTTGCATCATCCCTGAGTAGAAGATTTGCGGTTGCAAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAATAAGGTACAGAGCTTCTCCAGCGGGAAAGTGCATGTCTGCACGGCACGAGCCCACGCACCGCAGAACAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTGCCAGGTCTCCTCAGAGACCCTCGCAGGAACCTAACAATGAAATCCAGTTGTCCAGTCTTGATTTGTGGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGTAAGGAGAATCCGAGGCCAGTGGGCAATCCGCCCACTGTTGGGAGCGACTGACCTCACGAATCAATAATTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCTTTTGACTAGGAAGTGCAGCGGTTCTTGGGGGGAGGGGCTGGACTGGGTGGCGGACGCGAGGAGCAACGGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCCCGAACCTCTCCCCCGCCCCTACTATCTTGGCCTACATTTTCCCGCTCCGTCCCGGGACCTGGACACCCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATCCACGAAAAGCAACTCGCGCTCGAGAACAGCTCTCGTACCCTTCTACGTGATCTGCACCTTTAAGCTCACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCATCCCAAACCGGACCCCGGAGGCACCACCCACATCCGTCTAACATCACTTCCTTCAGAGTTTGAAAAAAAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATCTGGGAAGTAGAGGTGTTGTGCTGAGCGGCGCTCGGCGAACTGTGTGGACCGTCTGCTGGGACTCCGGCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCGTCCGCTCAGCCCCGTGGCCCCGCGCACCTACTGCCATGGAGACGCGGCCTCGTCTCGGGGCCACCTGTTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGGGCTTCAGTTTCCTGCTCCTCGTCATCTCTTCTGATGGACATAATGGGCTTGGAAAGGGTTTTGGAGATC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATATTCATTGGAGGACACTGGAAGATGGGAAGAAAGAAGCAGCTGCCAGGCCTTATTAATAAAATGGACGGGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTCTTTCGCTGCAGGAAGATCACATTCTCCTGAGGCCTATAACATTTGGCATAAATAACTGATGCCATTATAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCTGTATCTCCTTTCTGAGAAAGCTGAACCTGGGCCTAGCTGGCGTAGAACTCCTGTTTCCATAGAAACAAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGGTCTGTAAAAGTCAAGGGAGACAGGAAGAGCAGTTTGCACTTCCGGCTTACGTCGGAGACGCGTACAACCCG 1480
Query 1 -------------------------------------------ATGCCGCTCGTGGTGTTTTGCGGGCTGCCGT 31
|||||||||||||||||||||||||||||||
Sbjct 1481 GAAGTTGGCGCAGCGCGGTTGCCAATGGTCGCTCCCTGAGAGGATGCCGCTCGTGGTGTTTTGCGGGCTGCCGT 1554
Query 32 ACAGCGGCAAGAGCCGGCGTGCTGAAGAGTTGCGCGTGGCGCTGGCTGCCGAGGGCCGCGCGGTGTACGTGGTG 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ACAGCGGCAAGAGCCGGCGTGCTGAAGAGTTGCGCGTGGCGCTGGCTGCCGAGGGCCGCGCGGTGTACGTGGTG 1628
Query 106 GACGACGCAGCTGTCCTGGGCGCAGAGGACCCAGCGGTGTACGGCGATTCTGCCCGTGAGAAGGCATTGCGTGG 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GACGACGCAGCTGTCCTGGGCGCAGAGGACCCAGCGGTGTACGGCGATTCTGCCCGTGAGAAGGCATTGCGTGG 1702
Query 180 AGCTCTGCGAGCCTCCGTGGAACGGCGCCTGAGTCGCCACGACGTGGTCATCCTGGACTCGCTTAACTACATCA 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGCTCTGCGAGCCTCCGTGGAACGGCGCCTGAGTCGCCACGACGTGGTCATCCTGGACTCGCTTAACTACATCA 1776
Query 254 AAGGTTTCCGTTACGAGCTCTACTGCCTGGCACGGGCGGCGCGCACCCCGCTCTGCCTGGTCTACTGCGTACGG 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AAGGTTTCCGTTACGAGCTCTACTGCCTGGCACGGGCGGCGCGCACCCCGCTCTGCCTGGTCTACTGCGTACGG 1850
Query 328 CCCGGCGGCCCGATCGCGGGACCTCAGGTGGCGGGCGCGAACGAGAACCCTGGCCGGAACGTCAGTGTGAGTTG 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CCCGGCGGCCCGATCGCGGGACCTCAGGTGGCGGGCGCGAACGAGAACCCTGGCCGGAACGTCAGTGTGAGTTG 1924
Query 402 GCGGCCACGCGCTGAGGAGGACGGGAGAGCCCAGGCGGCGGGCAGCAGCGTCCTCAGGGAACTGCATACTGCGG 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GCGGCCACGCGCTGAGGAGGACGGGAGAGCCCAGGCGGCGGGCAGCAGCGTCCTCAGGGAACTGCATACTGCGG 1998
Query 476 ACTCTGTAGTAAATGGAAGTGCCCAGGCCGACGTACCCAAGGAACTGGAGCGAGAAGAATCCGGGGCTGCGGAG 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 ACTCTGTAGTAAATGGAAGTGCCCAGGCCGACGTACCCAAGGAACTGGAGCGAGAAGAATCCGGGGCTGCGGAG 2072
Query 550 TCTCCAGCTCTTGTGACTCCGGATTCAGAGAAATCTGCAAAGCATGGGTCCGGTGCCTTTTACTCTCCCGAACT 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TCTCCAGCTCTTGTGACTCCGGATTCAGAGAAATCTGCAAAGCATGGGTCCGGTGCCTTTTACTCTCCCGAACT 2146
Query 624 CCTGGAGGCCCTAACGCTGCGCTTTGAGGCTCCCGATTCTCGGAATCGCTGGGACCGGCCTTTATTCACTTTGG 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CCTGGAGGCCCTAACGCTGCGCTTTGAGGCTCCCGATTCTCGGAATCGCTGGGACCGGCCTTTATTCACTTTGG 2220
Query 698 TGGGCCTAGAGGAGCCGTTGCCCCTGGCGGGGATCCGCTCTGCCCTGTTTGAGAACCGGGCCCCACCACCCCAT 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TGGGCCTAGAGGAGCCGTTGCCCCTGGCGGGGATCCGCTCTGCCCTGTTTGAGAACCGGGCCCCACCACCCCAT 2294
Query 772 CAGTCTACGCAGTCCCAGCCCCTCGCCTCCGGCAGCTTTCTGCACCAGTTGGACCAGGTCACGAGTCAAGTACT 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CAGTCTACGCAGTCCCAGCCCCTCGCCTCCGGCAGCTTTCTGCACCAGTTGGACCAGGTCACGAGTCAAGTACT 2368
Query 846 GGCCGGATTGATGGAAGCGCAGAAGAGCGCTGTCCCCGGGGACTTGCTCACGCTTCCTGGTACCACAGAGCACT 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GGCCGGATTGATGGAAGCGCAGAAGAGCGCTGTCCCCGGGGACTTGCTCACGCTTCCTGGTACCACAGAGCACT 2442
Query 920 TGCGGTTTACCCGGCCCTTGACCATGGCAGAACTGAGTCGCCTTCGTCGCCAGTTTATTTCGTACACTAAAATG 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TGCGGTTTACCCGGCCCTTGACCATGGCAGAACTGAGTCGCCTTCGTCGCCAGTTTATTTCGTACACTAAAATG 2516
Query 994 CATCCCAACAATGAGAACTTGCCGCAACTGGCCAACATGTTTCTTCAGTATTTGAGCCAGAGCCTGCAC----- 1062
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CATCCCAACAATGAGAACTTGCCGCAACTGGCCAACATGTTTCTTCAGTATTTGAGCCAGAGCCTGCACTGACC 2590
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2591 AGAGGAGGTAGGGGGGAAGCCATGGCTTCTGATCTCCACTCCACTTTATTTCTCTGGGAAAAATAGGCTGCAGG 2664
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2665 TCTCCAGAGCATATCGATGCAGTACTGTACTAGAGCTGTTGTGACTGATTCACTCAAACTTTCCTGCATACCCC 2738
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2739 TGTGCCAGGCCTTGGGTTTACAGCATAAGTTCAGACTAAAGAGAATGGAGAACTATTGTGGTGCAACCTGGCAA 2812
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2813 ATCCCTCAGAGGACAGAGCTAAGGTGGACAGGGATTACCTAGATTGGATCCTACTTGGGCTATCACAGAGCATT 2886
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2887 GACCATTGGCTTCCCTCATCTGAGGCGTGGGAGAGCAGACTGGATAGATGAGAATTGTTTTAAAACAATTGTGA 2960
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2961 ACAGAAACTGAAGATGGTACAGTTCTACATCTGCACCTGCCCTTTTTTCATACCACAAAAGTATTTTTTGAGTA 3034
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3035 CTGTACTGACTTTTTGCTAGTTTCTATTCTGGGACCGAGTTCACAGATAAATCCATTGGTTTGTATCCTTGAGA 3108
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3109 AACTTTGTTTTTGTGGAAGTAAGAAAGTTATCTACTAGATTATTTCCTCTAATAAAATCTTTTAAAATAGTCTA 3182
Query 1063 ------ 1062
Sbjct 3183 CTGGAA 3188
