Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04737
- Subject:
- NR_038392.2
- Aligned Length:
- 3133
- Identities:
- 247
- Gaps:
- 2874
Alignment
Query 1 ---------------ATGGCTGCTTC------------ATCA--------TCATCCTC---------------- 23
.|||||.|.|| |.|| ||.||.||
Sbjct 1 ACGCCGCCTTCGCCGCTGGCTCCGTCTGTTGGGGGGCGAACACGCCGCGGTCCTCGTCGTGGTGAGCGCAGCCA 74
Query 24 CTCA-GCTGGT----GGGGTCAGTGGAAGTTCTGTCACTGGATCTGGTTTCAGTGTCTCAGACCTTGCCCCACC 92
|||| |||||| ||||| |.|| |||| ||
Sbjct 75 CTCAGGCTGGTCCTGGGGGT--GGGG-----CTGT----------------AG--------------------- 104
Query 93 ACGGAAAGCCCTTTTCACCTACCCCAAAGGAGCTGGAGAGATGTTAGAAGATGGCTCTGAGAGATTCCTCTGCG 166
.||||||..|| ||||..|||| ||||||||||||||||||||||||||
Sbjct 105 -GGGAAAGTGCT-------------AAAGCCGCTG-------------AGATGGCTCTGAGAGATTCCTCTGCG 151
Query 167 AATCTGTTTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAACATGATCAGCAAGTTGCTCGGATGGAA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 152 AATCTGTTTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAACATGATCAGCAAGTTGCTCGGATGGAA 225
Query 241 AAACTAGCTGGTTTGGTAGAAGAGCTGGAGGCTGACGAGTGGCGGTTTAAGCCCATCGAGCAGCTGCTGGGATT 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 226 AAACTAGCTGGTTTGGTAGAAGAGCTGGAGGCTGACGAGTGGCGGTTTAAGCCCATCGAGCAGCTGCTGGGATT 299
Query 315 CACCCCCTCTTCAGGT---------------------------------------------------------- 330
||||||||||||||||
Sbjct 300 CACCCCCTCTTCAGGTTGATACTGCCTGGATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACT 373
Query 331 -------------------------------------------------------------------------- 330
Sbjct 374 TTCTCACAGCTTACATAGCCATCCAGAGATCCACAGCTACGTCACTGAATTGTTAATGCACATTTGTACTTGGT 447
Query 331 -------------------------------------------------------------------------- 330
Sbjct 448 TTCTCTGTATCTATTCACAGGCAACAAATACTTATATGTGTGATCTTTCAGGGAATGTTTTGTTTATTTGTTTT 521
Query 331 -------------------------------------------------------------------------- 330
Sbjct 522 TAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGTTTGGGGTTAAGAGATACTCAAA 595
Query 331 -------------------------------------------------------------------------- 330
Sbjct 596 AATTTTCACAAGCCAAGTAGGGCATATATCAGATTTGGCCAACTGAATGGCGTCTGTCCTGTCATCCATATGGT 669
Query 331 -------------------------------------------------------------------------- 330
Sbjct 670 GCCTGGAAATATTTACCAGTCAAGGTCAAGGTCAGCATCTGTGGTTAAAAATATAGCATTCTGACCTAAAAAAG 743
Query 331 -------------------------------------------------------------------------- 330
Sbjct 744 TTATTTTGCAGATGAATGTGTTTTCAACTCAGGACCTATCCAAATGAGGAATTTTTAAATATTCTTTTTTTTTT 817
Query 331 -------------------------------------------------------------------------- 330
Sbjct 818 CCTATTTTTAGACATCAATTCTATAGATTCTGACTTTTTCTAACCTCTTATAGACATGCCAAATGCTGGCAAAA 891
Query 331 -------------------------------------------------------------------------- 330
Sbjct 892 AGAAGTGCTTTTTGGATATGGCAGCACTTGTAAAAATAAAGCAGTAAGCAAAATCCTTTTAAACACAGAAATCC 965
Query 331 -------------------------------------------------------------------------- 330
Sbjct 966 TGAGTTCTTCTCATTGGTGGACTCAAGCAATTCTGTAGCAAATAAATCCTTTGAAAGAGCTCCAAATTGGTGGC 1039
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1040 ATTATCCTTTCAAAATCTCAGGGATTTGGGATGAAGTGAAGAGGTCAAATTACTTTTTAGAAGAAGGGAATCTA 1113
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1114 AAAACCATCTCTCCTAAACAAATGGTAGACTGGCTTTACTTAAGGGATATTTGTCTTTATAGGAGTACATAAAT 1187
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1188 TTATCTTAATGATATTTAAGTAGTTTTTTTTTTTTTTTGAGACGAAGTTTTGCTCTTGTTGCCCAGGCTGTATC 1261
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1262 GCAATGGCGCGATCTCTGCTCACTGCAACATCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAA 1335
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1336 GTAGCTGGGATTACAGGCACCCGCCACCACACCCAGCTAATTTTTTGTATATTTAGTAGAGACGGGGTTTCACC 1409
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1410 ATGTTGACCAGGCTAGTCTCGAACTTCTGACCTCAGGTGATCCACCTGCCTCAGCCTCCCAAATTGCTGGGATT 1483
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1484 ACAGGCGTGAGCCACCTTGCCCAGCCAATTTTTTTTTAAAGAGACATGGTCTTGCTATGTTGCCCAGGTTGGTC 1557
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1558 TTGAACTCCTGGCCTCAAGAGATCCCCCCAACCTTGGCCTCCAAAGTGCTGGGATTACAGGCATGAGCCACCGC 1631
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1632 GCCTGGCCTCAAGTAAGTTTTTATACCATGATAGGGGAAAACCTGGAAGGCTAAGAGATGTGCTGTTTTCCTTC 1705
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1706 ATGGGACCCCACTTTCCACAGTAAACAACTGGTATAATCATTTATTACGTTGTATGCAAATTTTGCCTTAGACA 1779
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1780 ACATTTGTCTGGTTCCTTATTAATAACTTGCATCTGATCTGCTTAGAGTTGCTTAATTATAAGTAAATATAATC 1853
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1854 CCAGTAGCATTTAGCCTTAATCTCAAGAGTTCAAAATGTTTAACACATTCTACCTGACGGGAGGTGGTGACCTC 1927
Query 331 -------------------------------------------------------------------------- 330
Sbjct 1928 ATTCAGTCGGTTAAGAGCCTGAGCCCTGTGAAGTTAAACACCTGCTCATGGTCACATAGCCCAGGCAGAAGAAA 2001
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2002 ATCTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCTAAAGCAAATTGGAGACTG 2075
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2076 GGCACAGTGGCTCCCACCTTTAATCCCAGCACCTGGGGAGGCTGAGGTGAGTGGATCACTAGAGGTCAGGAGTT 2149
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2150 CAAGACCAGTCTGGCCGACATGGTGAAACTCAGTCTCTATTGAAAATACAAAAATTAGCTCAGTGTGGTGGCAC 2223
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2224 ACACTTGTAATCCCAGCTACTCAGGAGGCTGAGGCATGAGAATCGCTTAAACCCAGGAGGCGGAGGTTGCAGTG 2297
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2298 AGCTGAGATCACACCATTGCACTCTAGTCTGGGTGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAATAAAGC 2371
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2372 CGGGCGTGGTGGCTCACGCCTGTAATCCCGGCACTTTGGGAGGCTGAGGCAGGCGGATTGCCTGAGATCGGGAG 2445
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2446 TTCGAGACCAGCCTGGCCAACATGGTGAAACCTTGTCTCTACTAAAACTACAAAAAAAATTAGCCAGGCGTGGT 2519
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2520 GGCGGGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGCAGAATCGTTTGAACCCGGGAGGCGGAGGTTG 2593
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2594 CAGTGAGTGGAGATCGTGCCTGTGTGCTCCAGCCTGAGCAACAAGAGCGAAACTGTCTCAAAAAAAAGAAGAAA 2667
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2668 ATAAATAAATAAAAATCAGAGCACAAGAAGTACCAGTCCACCAACTCACATTTTCTATATTAATAATTCTTAAC 2741
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2742 TAAAAGAAGTTCCATATTCGACAGCATTTTAGTTTTTTAATAGTACTTATTAGCATCAACCATCTTGATAATCA 2815
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2816 CCAAGGGAAAAATTAAAAATACCTAGACTGCAATAAACCTTTAAATTGGATTTTCAGTGAGAATTTAGAAGCAA 2889
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2890 TCACTACCTTTCTCGTTTCATTTGTGTAACCATGCAGCATAGGCACTGTGTTACATCATCTTTACGCTTTGGTA 2963
Query 331 -------------------------------------------------------------------------- 330
Sbjct 2964 TTTGAACTTATTACAGAATTTTTTCTCTAAATTGGATGTTTCTTTATATGACCTTGGAAACTGAAGTGATCTTA 3037
Query 331 ------------------------- 330
Sbjct 3038 GCATTAAACAAAAATGCTTTTTGAA 3062
