Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04788
- Subject:
- NR_144474.1
- Aligned Length:
- 2609
- Identities:
- 624
- Gaps:
- 1961
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGCGCTCTCCGCGTTCTTCCAGCGCTGTCTTTTTAGTACCACATGCGCAGGCAGGTGATGGCGGCGCTGGTCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATCCGGGGCAGCGGAGCAGGGCGGCCGAGACGGCCCTGGCAGAGGTCGGGCCCCTCGGGGCCGCGTGGCCAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGATCCCCCCTGAGATCCTGAAGAACCCTCAGCTGCAGGCAGCAATCCGGGTCCTGCCTTCCAACTACAACTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAGATCCCCAAGACCATCTGGAGGATCCAACAAGCCCAGGCCAAGAAGGTGGCCTTGCAAATGCCGGAAGGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCTCCTCTTTGCCTGTACCATTGTGGATATCTTGGAAAGGTTCACGGAGGCCGAAGTGATGGTGATGGGTGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGACCTACGGGGCTTGCTGTGTGGATGACTTCACAGCGAGGGCCCTGGGAGCTGACTTCTTGGTGCACTACGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCACAGTTGCCTGATTCCCATGGACACCTCGGCCCAAGACTTCCGGGTGCTGTACGTCTTTGTGGACATCCGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAGACACTACACACCTCCTGGACTCTCTCCGCCTCACCTTTCCCCCAGCCACTGCCCTTGCCCTGGTCAGCACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATTCAGTTTGTGTCGACCTTGCAGGCAGCCGCCCAGGAGCTGAAAGCCGAGTATCGTGTGAGTGTCCCACAGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAAGCCCCTGTCCCCTGGAGAGATCCTGGGCTGCACATCCCCCCGACTGTCCAAAGAGGTGGAGGCCGTTGTAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAAGCTACGCCTCCCGGGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGTCACCACACCCAGCTAAGTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGCCTCGGTCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAGCCCTGTGGACTTCTAAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGCGAGTGCCTCTTCTGCTGCCCTAAACCACACTTAGCCTCCTTTCCACCCCTGCAGGTATCTTGGAGATGGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGCTTCCATCTGGAGTCTGTCATGATTGCCAACCCCAATGTCCCCGCTTACCGGTATGACCCATATAGCAAAGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTATCCAGAGAACACTATGACCACCAGCGCATGCAGGCTGCTCGCCAAGAAGCCATAGCCACTGCCCGCTCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTAAGTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCAGTCCTAAGATCCTGGAGCACCTGGAATCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CGACTCCGAGCCTTGGGCCTTTCCTTTGTGAGGCTGCTGCTCTCTGAGATCTTCCCCAGCAAGCTTAGCCTACT 1406
Query 1 -----------------------------------------------------------------------ATG 3
|
Sbjct 1407 TCCTGAGGTGGATGTGTGGGTGCAGGTGGCATGTCCACGTCTCTCCATTGACTGGGGCACAGCCTTCCCCAA-- 1478
Query 4 GCCGC-GCAGCGACCC------------------CTGCGGGTCCTGTGCCTGGC----------------GGGC 42
||||| ||.|..|||| |||.|||.|.| |.|||||| ||.|
Sbjct 1479 GCCGCTGCTGACACCCTATGAGGCGGCCGTGGCTCTGAGGGACAT-TTCCTGGCAGCAGCCCTACCCGATGGAC 1551
Query 43 TT-----CCGGCAGAGCGAGC-----GGGGCTTCC------GTGA--------GAAGACCG------------- 79
|| |.||| ||| ||||| || |||| .|.|||||
Sbjct 1552 TTCTACGCTGGC------AGCTCCTTGGGGC--CCTGGACGGTGAACCACGGCCAGGACCGCCGTCCCCACGCC 1617
Query 80 --GG--------GCGCTGAGGAAGGCGC-TGCGGGGT-CGCGC---------CGAGCTCGTG---TGC-----C 124
|| ||||.|.||||||.|| .|.||||| ||||| || || |||| ||| |
Sbjct 1618 CCGGGCCGGCCCGCGCGGGGGAAGGTGCAGGAGGGGTCCGCGCGTCCCCCTTCG-GC-CGTGGCTTGCGAGGAC 1689
Query 125 T-CAGCGGCCCGCAC------------CC----GGTCCCCGAC---CCCCCGGGCCCCGAGGGCGCCAGATCAG 178
| ||||.||..|.|| || |.|||..||| |.|||||||| |||
Sbjct 1690 TGCAGCTGCAGGGACGAGAAGGTGGCGCCGCTGGCTCCTTGACGCGCTCCCGGGCC--------------TCA- 1748
Query 179 ACTTCGGGTCCTGCCCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCAGAGCAGGAGGCCGACGTTTTCTCC 252
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1749 -----GGGTCCTGCCCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCAGAGCAGGAGGCCGACGTTTTCTCC 1817
Query 253 GCATTGGAAGAGCCCGCCGTCTGCAGGGGCCTGGAGGAATCACTGGGGATGGTGGCACAGGCACTGAACAGGCT 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1818 GCATTGGAAGAGCCCGCCGTCTGCAGGGGCCTGGAGGAATCACTGGGGATGGTGGCACAGGCACTGAACAGGCT 1891
Query 327 GGGGCCTTTTGACGGCCTTCTTGGTTTCAGCCAAGGGGCTGCGCTAGCAGCCCTTGTGTGTGCCCTGGGCCAGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1892 GGGGCCTTTTGACGGCCTTCTTGGTTTCAGCCAAGGGGCTGCGCTAGCAGCCCTTGTGTGTGCCCTGGGCCAGG 1965
Query 401 CAGGCGATCCCCGCTTCCCCTTGCCACGGTTTATCCTCTTGGTGTCTGGTTTCTGTCCCCGGGGCATTGGGTTC 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1966 CAGGCGATCCCCGCTTCCCCTTGCCACGGTTTATCCTCTTGGTGTCTGGTTTCTGTCCCCGGGGCATTGGGTTC 2039
Query 475 AAGGAATCCATCCTGCAAAGGCCCTTGTCATTGCCTTCGCTCCATGTTTTTGGGGACACTGACAAAGTCATCCC 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 AAGGAATCCATCCTGCAAAGGCCCTTGTCATTGCCTTCGCTCCATGTTTTTGGGGACACTGACAAAGTCATCCC 2113
Query 549 CTCTCAGGAGAGTGTGCAACTGGCCAGCCAATTTCCCGGAGCCATCACCCTCACCCACTCTGGTGGCCACTTCA 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2114 CTCTCAGGAGAGTGTGCAACTGGCCAGCCAATTTCCCGGAGCCATCACCCTCACCCACTCTGGTGGCCACTTCA 2187
Query 623 TTCCAGCAGCTGCACCCCAGCGTCAGGCCTACCTCAAGTTCTTGGACCAGTTTGCAGAG--------------- 681
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2188 TTCCAGCAGCTGCACCCCAGCGTCAGGCCTACCTCAAGTTCTTGGACCAGTTTGCAGAGTGAAAGATCAAGAAA 2261
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2262 TGTCTCTGCTCCTACATCCAGCTCCTCTAGGGGCAGCCTCCGTCATCCATGCCCTCCCAGGACCCTCCACTCAC 2335
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2336 TGCTGTGAGTGCGCCTCACCAGAACCAGTTAAGAGACAACTATCAATTCTTGAGACCCAAATTATAAGGGCCCT 2409
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2410 GCCCTGTACTGAAGAAAAGGGGAGCACAAGGCCTTAATGGACATTGACTTGTGAAAACGCAAACATGAATATGG 2483
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2484 TTGGAGAGCCCTGGATTAGGAGGGTGACATGGGGAAGGCAGAGGCTGGCACCATGGTGACTGCCACATAATAAA 2557
Query 682 ------------------- 681
Sbjct 2558 GTGGTGATTTGGATTTTGA 2576
