Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_04817
• Subject: XM_006501253.3
• Aligned Length: 1358
• Identities: 798
• Gaps: 433

Alignment

Query    1  ATGTCTTTGGTGGACTTGGGAAAGAGGTTGCTAGAAGCAGCAAGAAAAGGCCAAGATGATGAAGTGAGAACGTT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GATGGCAAATGGCGCCCCATTCACCACAGACTGGCTTGGAACATCACCCCTCCACCTTGCAGCTCAATATGGTC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATTATTCCACAGCAGAAGTACTCCTTCGAGCAGGTGTTAGCAGGGATGCCCGGACTAAAGTAGACAGGACCCCC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TTGCACATGGCTGCAGCCGATGGACATGCGCACATCGTGGAACTGCTTGTTCGGAATGGTGCAGATGTGAATGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAAGGACATGCTGAAGATGACAGCTTTGCATTGGGCCACAGAGCGCCACCATCGAGATGTCGTAGAGTTACTTA  370
                   ||||||.|||||||||||.||||.|||||||||||||.|||.||.||.||||||||.||||||||||
Sbjct    1  -------ATGCTGCAGATGACAGCTCTGCACTGGGCCACAGAGCACCATCACCGGGATGTCGTCGAGTTACTTA  67

Query  371  TCAAATATGGAGCTGATGTCCATGCTTTCAGCAAATTTGATAAATCAGCCTTTGACATAGCTCTGGAGAAAAAC  444
            ||||||||||||||||||||.|.|||||.||||||||||||||.||.||||||||||||||..|||||||||||
Sbjct   68  TCAAATATGGAGCTGATGTCTACGCTTTTAGCAAATTTGATAAGTCTGCCTTTGACATAGCAATGGAGAAAAAC  141

Query  445  AATGCTGAGATTTTGGTCATCCTCCAGGAAGCAATGCAGAATCAGGTGAATGTTAATCCA-GAGAGAGCCAACC  517
            |||.||||||||||||||||.||.||||||||||||||||||||||||||...||| ||| |||||||||||||
Sbjct  142  AATACTGAGATTTTGGTCATGCTTCAGGAAGCAATGCAGAATCAGGTGAACACTAA-CCACGAGAGAGCCAACC  214

Query  518  CTGTGACTGACCCTGTGAGTATGGCTGCTCCATTCATCTTCACGTCGGGTGAGGTTGTTAACCTCGCAAGCCTT  591
            |.|||.||.|||||||||.|.||.|||||||.|||||||||||.||.||.|||||..||||||||||.|||.||
Sbjct  215  CAGTGGCTAACCCTGTGACTGTGACTGCTCCGTTCATCTTCACCTCTGGAGAGGTCATTAACCTCGCTAGCTTT  288

Query  592  ATTTCTTCAACCAACACCAAAACAACCTCAGGTGACCCCCATGCCTCAACAGTACAGTTTTCAAATTCTACCAC  665
            .|.||||||.|||||||||||.|||||||||             ||||         |||              
Sbjct  289  GTCTCTTCAGCCAACACCAAAGCAACCTCAG-------------CTCA---------TTT--------------  326

Query  666  CTCAGTGCTGGCTACCCTTGCAGCTCTTGCTGAGGCATCAGTCCCCCTCTCCAACTCACACAGAGCCACAGCCA  739
                                                                                      
Sbjct  327  --------------------------------------------------------------------------  326

Query  740  ATACAGAGGAAATTATAGAAGGAAATTCCGTTGACTCATCAATCCAGCAAGTAATGGGGAGTGGAGGCCAGAGG  813
                |||.|||||...||||||||||||..|||||||.||.|.|||||||||..||||||||||||||||||||
Sbjct  327  ----AGAAGAAATGGAAGAAGGAAATTCTCTTGACTCCTCGACCCAGCAAGTGGTGGGGAGTGGAGGCCAGAGG  396

Query  814  GTCATCACCATAGTGACTGATGGAGTCCCTCTGGGTAATATCCAAACTTCAATCCCTACTGGAGGCATTGGCCA  887
            |||||||||||.||||||||||||||||||||||||||.||||||||.|||.|||||.||||||||||||||||
Sbjct  397  GTCATCACCATCGTGACTGATGGAGTCCCTCTGGGTAACATCCAAACATCACTCCCTGCTGGAGGCATTGGCCA  470

Query  888  GCCATTTATTGTAACTGTGCAAGATGGACAGCAAGTTCTAACTGTACCTGCTGGTAAGGTTGCAGAGGAGACTG  961
            ||||||||||||||||.||||||||||||||||||||||||||||.|||||||||.||||||||||||||||..
Sbjct  471  GCCATTTATTGTAACTATGCAAGATGGACAGCAAGTTCTAACTGTGCCTGCTGGTCAGGTTGCAGAGGAGACAA  544

Query  962  TAATTAAAGAGGAA------GAAGAAGAGAAGTTGCCACTAACAAAGAAACCAAGGATAGGAGAGAAGACAAAC  1029
            |||||.||||.|||      |||||||||||.||||||.|....||||.|||||||||.|.|||||.|||||||
Sbjct  545  TAATTGAAGATGAAGAAGAGGAAGAAGAGAAATTGCCATTGGTGAAGAGACCAAGGATGGCAGAGATGACAAAC  618

Query 1030  AGTGTGGAGGAAAGCAAGGAAGGCAATGAAAGAGAGCTACTACAGCAACAACTCCAGGAGGCCAATCGAAGAGC  1103
            ||.||.|||||||..||||||||||.|||||||||||||||.||||||||.||||||||||||||.||||||||
Sbjct  619  AGGGTTGAGGAAATGAAGGAAGGCAGTGAAAGAGAGCTACTGCAGCAACAGCTCCAGGAGGCCAACCGAAGAGC  692

Query 1104  CCAGGAATACCGACACCAGCTCCTAAAGAAAGAGCAGGAAGCAGAACAGTACCGTCTTAAGCTGGAGGCCATAG  1177
            ||||||.|||.|||||||||||||.||||||||||||||.||.||.|||||.||.||.|.|||||||||.||.|
Sbjct  693  CCAGGAGTACAGACACCAGCTCCTCAAGAAAGAGCAGGAGGCCGAGCAGTATCGGCTCAGGCTGGAGGCTATGG  766

Query 1178  CCCGACAGCAGCCCAA------TGGAGTTGATTTCACCATGGTTGAAGAGGTGGCTGAGGTAGATGCTGTAGTA  1245
            |.|..||||||.||||      ||.|||||||.|||||.|.|||||.||.||.|||||.||.|||||||||||.
Sbjct  767  CTCAGCAGCAGACCAACGGAGTTGAAGTTGATGTCACCGTAGTTGAGGAAGTAGCTGAAGTGGATGCTGTAGTG  840

Query 1246  GTCACAGAGGGGGAGTTGGAAGAGAGAGAGACAAAAGTGACTG-GGTCAGCAGGGACCACAGAGCCTCACACTA  1318
            ||.|||||.|||||...||.|||.||||..|||.||||.| || .|||||.|.|||||||.|||||||||||||
Sbjct  841  GTGACAGAAGGGGACGAGGTAGAAAGAGCAACACAAGTCA-TGAAGTCAGGAAGGACCACGGAGCCTCACACTA  913

Query 1319  GAGTTTCCATGGCAACTGTTTCATCT  1344
            ..||||||||.|.||||.|||||||.
Sbjct  914  ACGTTTCCATAGAAACTATTTCATCC  939