Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04821
Subject:
XR_001736965.2
Aligned Length:
2223
Identities:
710
Gaps:
1512

Alignment

Query    1  -------------ATGGCGGCTGCGTCGGGGTCGGTTCTGCAGCGCTGTATCGTGTCGCCGGCAGGGAGGCATA  61
                         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  AGTGGCATCAGCGATGGCGGCTGCGTCGGGGTCGGTTCTGCAGCGCTGTATCGTGTCGCCGGCAGGGAGGCATA  74

Query   62  GCGCCTCTCTGATCTTCCTGCATGGCTCAGGTGATTCTGGACAAGGATTAAGAATGTGGATCAAGCAGGTTTTA  135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCGCCTCTCTGATCTTCCTGCATGGCTCAGGTGATTCTGGACAAGGATTAAGAATGTGGATCAAGCAGGTTTTA  148

Query  136  AATCAAGATTTAACATTCCAACACATAAAAATTATTTATCCAACAGCTCCTC----------------------  187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct  149  AATCAAGATTTAACATTCCAACACATAAAAATTATTTATCCAACAGCTCCTCCCAGTTACACTGTTGGACCAAG  222

Query  188  -----CCAGATCATATACTCCTATGAAAGGAGGAATCTCCAATGTATGGTTTGACAGATTTAAAATAACCAATG  256
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTTTGCCAGATCATATACTCCTATGAAAGGAGGAATCTCCAATGTATGGTTTGACAGATTTAAAATAACCAATG  296

Query  257  ACTGCCCAGAACACCTTGAATCAATTGATGTCATGTGTCAAGTGCTTACTGATTTGATTGATGAAGAAGTAAAA  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ACTGCCCAGAACACCTTGAATCAATTGATGTCATGTGTCAAGTGCTTACTGATTTGATTGATGAAGAAGTAAAA  370

Query  331  AGTGGCATCAAGAAGAACAGGATATTAATAGGAGGATTCTCTATGGGAGGATGCATGGCAATGCATTTAGCATA  404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  371  AGTGGCATCAAGAAGAACAGGATATTAATAGGAGGATTCTCTATGGGAGGATGCATGGCAATACATTTAGCATA  444

Query  405  TAGAAATCATCAAGATGTGGCAGGAGTATTTGCTCTTTCTAGTTTTCTGAATAAAGCATCTGCTGTTTACCAGG  478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TAGAAATCATCAAGATGTGGCAGGAGTATTTGCTCTTTCTAGTTTTCTGAATAAAGCATCTGCTGTTTACCAGG  518

Query  479  CTCTTCAGAAGAGTAATGGTGTACTTCCTGAATTATTTCAGTGTCATGGTACTGCAGATGAGTTAGTTCTTCAT  552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTCTTCAGAAGAGTAATGGTGTACTTCCTGAATTATTTCAGTGTCATGGTACTGCAGATGAGTTAGTTCTTCAT  592

Query  553  TCTTGGGCAGAAGAGACAAACTCAATGTTAAAATCTCTAGGAGTGACCACGAAGTTTCATAGTTTTCCAAATGT  626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTTGGGCAGAAGAGACAAACTCAATGTTAAAATCTCTAGGAGTGACCACGAAGTTTCATAGTTTTCCAAATGT  666

Query  627  TTACCATGAGCTAAGCAAAACTGAGTTAGACATATTGAAGTTATGGATTCTTACAAAGCTGCCAGGAGAAATGG  700
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTACCATGAGCTAAGCAAAACTGAGTTAGACATATTGAAGTTATGGATTCTTACAAAGCTGCCAGGAGAAATGG  740

Query  701  AAAAACAAAAA---------------------------------------------------------------  711
            |||||||||||                                                               
Sbjct  741  AAAAACAAAAATGAATGAATCAAGAGTGATTTGTTAATGTCATTAGCTATTGTTAGTGTTAGTGTATTTTTTGT  814

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct  815  GTGGCCCAAGACAATCTTCTTCCAGTGTGGCCCAGGGAAGCCAAAAAATTGGACACACTTGATGTAAACATTTC  888

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct  889  AAGAAAATTCAGACTATATGATCACTCAAGACAGCCGATTCACCAGCCTTCTGAAGGGAAGACTAAGCATATTC  962

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct  963  CTATATTGAAGATGGAGGGCCGTGTGGGTGAATACCTTGCATACATGGAGATGAGATCCAGATGACAAGAATGT  1036

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1037  AGAAAGGGTTGTTTGAAACATGTTAGAGGAGAACATTGGAAACATCAAACACTGTGATTGTAAGCAATGGAAAT  1110

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1111  AACTGTCCTAAACTGTAAAACAATGCAAGAACATGAAGATGTCAAAGCCCATGGTATGTTCATTTAGTCATTCT  1184

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1185  CCGGACTAAAAATATTTGTATTTTCTATCAACAAGAGTTTACCTTGATATATAAATATATTCATGCAAATGTGC  1258

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1259  ATATTAATAAGCACACATGTATGTATATAATATACATATATTGTGTATATATATGTATATGTGGGTGTGTATTT  1332

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1333  CCATGTATTGAGGTTTTTCAGAGAACGAATGTCACTAGTAAACGGTAGAAAATGTATGTTATTAAACCTTTATT  1406

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1407  TACTAATTTTCTTAACAACAACACTAAAGCTAGAAAATAAAAAGGATCATTCATTTTTAAACAGATGGCAAAAA  1480

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1481  CACTCCCTGGGGAAGTCCAACCAGACTGATGTTTTGTCTGCATCAATTTCCCTGTAGACCGTCTGCCATGCTTT  1554

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1555  GACAAGCTCGGCATGCCTCCCTTACATGTTGAACATCAATATCTATAGACAACTCTATATATGTTCTCATGAGG  1628

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1629  GTAAAGGCTATGTCAAATAACTACCAATATGTATATGTAATTATTTTCTATGTGGCATATACTAGCTGTCATAT  1702

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1703  TTTCACTTAATAATAAATGCTTTCAGAAATAGGGACCATTTTGTATTTTTTCTATGTTCTCCATGACACATGTC  1776

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1777  TTGAGACTATTGTCCCTTCCTATACAATTGAAATTATATATGTTTCTGCCACAGTCATTTTCATACAACTGGCC  1850

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1851  TTTGGATTTCAGGAGACATGTTTTCTCTTCAAATTCTACATTTTATTATCTTAGCTTTCATACTGTGTTTGTTT  1924

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1925  TGGAAAGGGTATTTTTTACTACCTGTGTTCACCTGAAGTCTGTGAGTTTTTAAGGGAGATATTTATCACATAGA  1998

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1999  TTTGAGACCCCCAAACAACTTAGCTCTTCTATAACTCAACAGTAATGCCCGAGCTCAGATAGACTCAGTGCAGT  2072

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 2073  TCATTTAAAAATATAAATACATACATACACACAAACATATATGCATACTTTTTAAAAAAAATAGTGTAATATGA  2146

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 2147  AGTTGGGCCCTTACCCTATACTGTATACAAAAATTAGCTCGGAATGGATCAATGAGGGCTAAACTATAAAATTC  2220

Query  712  ---  711
               
Sbjct 2221  TTA  2223

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