Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04839
Subject:
NR_160940.1
Aligned Length:
2193
Identities:
341
Gaps:
1816

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTATCAATGAGACAGCATGGCCCGTACTAAGCAGACTGCCCGCAAGTCGACCGGCGGCAAGGCCCCGAGGAAGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCTGGCTACCAAAGCGGCCCGCAAGAGCGCGCCGGCCACGGGCGGGGTGAAGAAGCCGCACCGCTACCGGCCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCACCGTGGCTCTGCGGGAGATCTGGCGCTACCAGAAGTCTACGGAGCTGCTGATCCGCAAGCTGCCCTTCCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGCTGGTACGCGAGATCGCGCAGGACTTTAAGACGGACCTGCGCTTCCAGAGCTCGGCCGTGACGGCGCTGGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCTGCAGGAGGCCAGCGAGGCCTACCTGGTGGGGCTGTTCGAAGACACGAACCTGTGCGCCATCCATGCCAAGC  370

Query    1  -----------ATGC-------------------CAGACCCGTCC--------------------AAATCGGCT  24
                       ||||                   |||.|.|.|||                    |||||.|||
Sbjct  371  GCGTGACCATCATGCCCAAGGACATCCAGTTGGTCAGCCGCATCCGCGGGGAGAGGGCCTAAGCGAAATCCGCT  444

Query   25  CCTGCGCCCAAGAAGGGTTCTAAAAAGGCTGTCACCAAG-GCACAGAAGAAGGACGGCAAGAAGCGCAAGCGCG  97
            |||||.|||||||||||.||.|||||||||||.| .||| |..|||||||||||||||.||||||||||||||.
Sbjct  445  CCTGCTCCCAAGAAGGGCTCCAAAAAGGCTGTTA-AAAGAGTGCAGAAGAAGGACGGCGAGAAGCGCAAGCGCA  517

Query   98  GCCGCAAGGAGAGCTATTCTATCTACGTGTACAAGGTGCTGAAGCAGGTGCACCCCGACACCGGCATCTCGTCC  171
            ||||||||||||||||.||..|.||||||||..||||||||||||||||.||||||||||||||||||||||||
Sbjct  518  GCCGCAAGGAGAGCTACTCCGTTTACGTGTAGGAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATCTCGTCC  591

Query  172  AAGGCCATGGGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCAGCGAGGCCTCCCGCCTGGC  245
            ||||||||||||||||||||||||||||||||.||||||||||||||||||||..|.|||||.|||||||||||
Sbjct  592  AAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGAGAGGCGTCCCGCCTGGC  665

Query  246  ACACTACAACAAGCGCTCCACCATCACGTCCCGCGAAGTGCAGACGGCCGTTCGCCTGCTGCTGCCCGGCGAGC  319
            .||||||||||||||||||||||||||.|||||.||..|.|||||||||||.||||||||||||||||||.|||
Sbjct  666  GCACTACAACAAGCGCTCCACCATCACATCCCGTGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGCAAGC  739

Query  320  TGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCTGTCACCAAGTACACCAGCTCCAAG---------------  378
            ||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.               
Sbjct  740  TGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCGGTCACCAAGTACACCAGCTCGAACATTTTCTAGCTGAAG  813

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  814  TTACTGTTGTTGTCAACTACTCAGCATCCAAAATTTTCACAAGAAAACAAGGTTTTTTCTCTTCAAATTACAGT  887

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  888  CCAAAGAGTGGCAAACAAGAAAGATGACAGAGTCCGAAGACCTTAAGATTTCTTTTCTTTGGTCAAGAACTCAT  961

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  962  TACACAATGGATGATACATCTTAGGTGGTCCTACTAAAAAGAGACACAAGAATCTAGAGACTATCTCACTGTCA  1035

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1036  ACCAATCCAAGGAACTTTGCTTTAGATGGCCAAAGCCAGAAACAGCAAAGTAGAAGAACTACTAGAGCTTTAAG  1109

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1110  CAGTTCCTTAGTATTTTTCCTTGGCTTATCCAAGCCTGGATACTGGTCCACTTTCCCAAAGTTGGTAAAGAGGT  1183

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1184  AATACAGCTTGGGATTGATTGGATATTGAGACAGAAAGAGAGGGGGAGAGAGAGATATCTAGGTACTGGAGCAG  1257

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1258  CACTAGGCACTCAGAAGAAGGAACACTTGGAGCAAAAAATGAAGGATATAGATTAGTGAAGTGAAGTCAGGAGC  1331

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1332  AAATGATCTCAGTTGCTTTACATGATCAAAGGACAATAACTGCAAATTGCCAGAGGGTAGGTGAAGCTCCATAT  1405

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1406  CACTTTTTAATATTAGTGTTTTAAACACCTAGGAATAGAATATACCTAAAGATAATAGCTTGATTTCCCCACAC  1479

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1480  CCACCTTTGCAATGTTTTGATTTTGCACAAGTCTTGGTTTCTAGTTTGTGGGATTATCATTTTTCATTGCATTG  1553

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1554  AAGGAAAATTCTTTAGGCCAGGAGGGAGTCTAAGACTTCAGACACAGCACAGATACGATCCTGGGCAAGGGTCA  1627

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1628  TTCAGTGTTCTTAAGAAAATTCTAAATCCTAAGGTGTGATGGTTAATATTAGGTGTCAACTTGATAGGATTAAA  1701

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1702  GGATGCCTAGATAGCTAAGTATTGTTTCTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTAACATTTGAGT  1775

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1776  CAGTGGACCAGGAGAGGAAGACTCACCCTCAATGTGGGTTGGCACCATCCAGTCGGCTGCCAGGGTAGCTACAA  1849

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1850  CAAAGCAGGAGAGAGAAGGTGGGCTAAGCTGGCTTGCAGAGTTCTGGCTTTCATCCCTCTCCTGTGCTGGATGC  1923

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1924  CTCCATCCATTCCTCCTGCCTTTGGACATCAGACTCCAGGTTGTTTGGCCTTTGGACTCTTGGACTTAACACCA  1997

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1998  GTGGCTTGCCTGGGGCTTTTGGGCCTTAGGCCACAGACTGAAGGCTGCACTATGGGCTTCCCTACTCTTGAGGC  2071

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 2072  TTTTGGACTCAGACTGAACCACTACTGGCTTCTTTCTTCCTCAGCTTGCAGACGGCCCACCGTAGGACATTGCC  2145

Query  379  -----------------------------------------------  378
                                                           
Sbjct 2146  TTGTAATCATGTGAGCCAATTCTCCTTAATAAACTCCTTTTAATATA  2192

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