Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04966
- Subject:
- XR_001747777.1
- Aligned Length:
- 2256
- Identities:
- 1142
- Gaps:
- 1113
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGGCGGGTCCGCGGCTGGCCGGCCGGGCGGGCGCCGACAATGAGCCTCCATAAAAGGGAGCGGCGGGGGGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCCCCGGATTGAGCCCTCCCCGCCCGGGCTCCCGACGCGCCGAGGTCTCGGGGAGGCCCGGACGCGCCGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCAGGCCCGGCCGGCGAGCGGCGGGCGGGCGGCGGGGAGGGGGCTGCGCGGGGCGGGCGGCGGGCCCGGCGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTCCGGCCAGGAGGCGGGAGGCGGTTGCCGGCTGCGCGCCGAAGCCTGCGCGCCAGTCCTCCGGCCACTGCTA 296
Query 1 -----------------ATGGCCCTAAAGGCCGAGGGCGCCGCACTCGACTGCTTCGAGGTGACGCTGAAATGC 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCGCCCACGGCCGCACCATGGCCCTAAAGGCCGAGGGCGCCGCACTCGACTGCTTCGAGGTGACGCTGAAATGC 370
Query 58 GAGGAAGGGGAGGACGAGGAGGAGGCCATGGTGGTGGCCGTAATTCCGCGGCCCGAGCCGATGCTCAGAGTGAC 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGGAAGGGGAGGACGAGGAGGAGGCCATGGTGGTGGCCGTAATTCCGCGGCCCGAGCCGATGCTCAGAGTGAC 444
Query 132 CCAACAGGAGAAGACCCCACCGCCTAGACCCAGCCCGCTAGAGGCAGGCAGTGATGGCTGTGAGGAGCCGAAGC 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCAACAGGAGAAGACCCCACCGCCTAGACCCAGCCCGCTAGAGGCAGGCAGTGATGGCTGTGAGGAGCCGAAGC 518
Query 206 AGCAGGTGTCTTGGGAGCAGGAGTTCCTGGTGGGCAGCAGCCCAGGAGGCAGCGGGCGGGCACTGTGCATGGTG 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGCAGGTGTCTTGGGAGCAGGAGTTCCTGGTGGGCAGCAGCCCAGGAGGCAGCGGGCGGGCACTGTGCATGGTG 592
Query 280 TGTGGCGCTGAGATCCGGGCACCCTCGGCCGACACAGCTCGCTCGCACATCTTGGAGCAGCACCCTCACACCTT 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGTGGCGCTGAGATCCGGGCACCCTCGGCCGACACAGCTCGCTCGCACATCTTGGAGCAGCACCCTCACACCTT 666
Query 354 GGACCTGAGCCCTTCTGAGAAGAGCAATATCCTGGAGGCCTGGAGTGAAGGGGTGGCCCTCTTGCAAGACGTGA 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGACCTGAGCCCTTCTGAGAAGAGCAATATCCTGGAGGCCTGGAGTGAAGGGGTGGCCCTCTTGCAAGACGTGA 740
Query 428 GAGCTGAGCAGCCGTCCCCACCCAACTCAGACTCGGGCCAGGATGCCCACCCAGACCCAGACGCCAACCCAGAC 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAGCTGAGCAGCCGTCCCCACCCAACTCAGACTCGGGCCAGGATGCCCACCCAGACCCAGACGCCAACCCAGAC 814
Query 502 GCTGCCAGAATGCCAGCCGAAATCGTCGTTCTCCTTGACTCTGAGGATAACCCATCCCTCCCTAAAAGGAGCAG 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 815 GCTGCCAGAATGCCAGCCGAAATCGTCGTTCTCCTTGACTCTGAGGATAACCCATCCCTCCCTAAAAGGAGCCG 888
Query 576 GCCCAGGGGACTCCGCCCCCTCGAGCTTCCTGCTGTCCCTGCCACAGAGCCAGGAAATAAGAAGCCCCGTGGTC 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCCCAGGGGACTCCGCCCCCTCGAGCTTCCTGCTGTCCCTGCCACAGAGCCAGGAAATAAGAAGCCCCGTGGTC 962
Query 650 AGAGATGGAAGGAACCCCCAGGGGAAGAGCCAGTCAGAAAGAAAAGAGGCAGACCTATGACCAAAAACCTGGAC 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGAGATGGAAGGAACCCCCAGGGGAAGAGCCAGTCAGAAAGAAAAGAGGCAGACCTATGACCAAAAACCTGGAC 1036
Query 724 CCTGACCCAGAGCCCCCATCGCCAGACTCGCCCACGGAGACTTTCGCAGCACCAGCCGAGGTCCGACACTTCAC 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCTGACCCAGAGCCCCCATCGCCAGACTCGCCCACGGAGACTTTCGCAGCACCAGCCGAGGTCCGACACTTCAC 1110
Query 798 TGACGGCAGCTTCCCCGCCGGCTTCGTCTTGCAGCTCTTCTCCCACACCCAGCTCAGGGGCCCAGACAGCAAGG 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGACGGCAGCTTCCCCGCCGGCTTCGTCTTGCAGCTCTTCTCCCACACCCAGCTCAGGGGCCCAGACAGCAAGG 1184
Query 872 ACTCACCCAAAGACAGGGAAGTGGCAGAAGGAGGCCTTCCCCGGGCGGAGAGCCCCTCTCCA------------ 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACTCACCCAAAGACAGGGAAGTGGCAGAAGGAGGCCTTCCCCGGGCGGAGAGCCCCTCTCCAGTTTCAGCTTGA 1258
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1259 GTCACATTCCAGTCCTGGCTCCCTGAGACCGAGTGTGCTGCTTGGACTTGAGCGTGTCCCGAGTCTCCTGGTCC 1332
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1333 TCTCCGGTGGATCCCTGCTCTAAATGGCTGACCTCTTCCACTGTCTAATGGGTCTTCTGATTTCATTCTCGAAA 1406
Query 934 ----------------------------------------------------------GCTCCCCCTCCGGGGC 949
||||||||||||||||
Sbjct 1407 GGGAGCCCTCATTTCAAGTCCTGGGGTACCCTGTGCGCAAACTCCATCTATCTGGAGTGCTCCCCCTCCGGGGC 1480
Query 950 TCCGCGGGACACTGGATCTCCAGGTTATCCGCGTGCGGATGGAGGAGCCCCCAGCGGTCAGCCTCCTGCAAGAC 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCCGCGGGACACTGGATCTCCAGGTTATCCGCGTGCGGATGGAGGAGCCCCCAGCGGTCAGCCTCCTGCAAGAC 1554
Query 1024 TGGTCCAGGCACCCCCAGGGCACCAAGCGTGTGGGAGCAGGTGACACCTCAGACTGGCCCACAGTTCTGTCAGA 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGGTCCAGGCACCCCCAGGGCACCAAGCGTGTGGGAGCAGGTGACACCTCAGACTGGCCCACAGTTCTGTCAGA 1628
Query 1098 ATCCAGCACCACTGTGGCAGGGAAGCCGGAAAAAGGGAATGGAGTG---------------------------- 1143
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ATCCAGCACCACTGTGGCAGGGAAGCCGGAAAAAGGGAATGGAGTGTAAATTCTTGCTTTCCTGGGGAGGGAGG 1702
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1703 GAGGGATGAGGCAGCGTCCCCCAGTGGCTTATAACTCAGAGCTGCCTGGCTCACCCACCTGGTGGAGAGAGTAG 1776
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1777 AAACAGGTGCCAGGGCAGGAGGGGGCTGGGGCAGCATCCACTGTTATTTCGGGGCACTGGAAAGTGTCTGTTCC 1850
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1851 TGGCCAGGCCTGAGGTCGGCGAGGGTGGCTGAGGCTGTTGTGCAGTAGGGCACTGGGCCTGTGGAGAACACCTA 1924
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1925 CCCCAGTCCTTCGCTGACCCCCACCTCTGTTTGTCCCCCATGACCTCCTCCCACCCTCCCCCTGCTCCCCACCA 1998
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1999 TTCTCCCTTGGCACAGTGCCTTACACAAGAGTGGTCATAAGGGGGTTTGAACTGAGTCCCACTACCTCGGGGGA 2072
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2073 CACCTCTCCTCCCCACTTGTTCAGGCTTCTAAACCAGGAGGCCTCCATTACCTCTTCCTGTCCCACCCCTGCAG 2146
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2147 AGGCCTGAAGCTGGGCCTGGGCACCCCATTCACTCCCGTTCTCATTTACATCTGTTTTCCTGTTGTATATATCA 2220
Query 1144 ------------------------------------ 1143
Sbjct 2221 CCTTTGTTGACAATAAATTATTTTTTTTTATTAAGA 2256
