Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05039
- Subject:
- XM_011529930.2
- Aligned Length:
- 1821
- Identities:
- 1021
- Gaps:
- 792
Alignment
Query 1 ATGGCGTTCAGGAGACAAGTGAAAAACTTTGTGAAAAATTACTCAGATGCTGAAATAAAAGTCAGGGAAGCAAC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTCTAACGACCCTTGGGGTCCCTCTAGTTCTCTGATGTTAGATATCAGTGACTTGACTTTCAACACAATTTCTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCTCAGAGATTATGAATATGCTGTGGCACAGACTCAATGACCATGGGAAGAACTGGCGCCACGTGTATAAATCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTTACCCTAATGGATTATCTCATCAAGAATGGATCAAAGAAAGTTATTCAGCATTGCAGAGAGGGGTTCTGTAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCTTCAAACACTAAAAGATTTTCAGCACATAGATGAAGCTGGAAAAGACCAAGGTTATTATATCCGGGAAAAAT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTAAGCAAGTCATCACATTGCTGATGGATGAACCATTGCTGTGTAAAGAGAGGGAAGTGGCATGTCGGACTAGA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CAGCGTACCTCCCACTCTATATTGTTTTCTAAAAGACAACTTGGTTCAAGTAACTCACTGACAGCGTGCACTTC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TGCCCCCACACCGGATATTTCTGCTTCAGAGAAGAAGTATAAGCTTCCTAAGTTTGGAAGGTTACATAATAAAA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GAAATGTGTGCAAGGCAGGATTGAAACAAGAGCATTGCCAAGATGTTCATTTGCCTACAGAAACTATGTTGTCC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CAGGAAACACTTCCACTCAAGATTCATGGTTGGAAATCAACAGAGGACCTGATGACATTTTTGGATGATGATCC 740
||||
Sbjct 1 -------------------------------------------------------------------ATGA--- 4
Query 741 AGAGCTGCCTTTACTAGCAACACCTCCTTCCATTGTCTCTCCAATCACTTGCTTGTCAGAAGCAGAAGAAGTTT 814
||||||.||..|||||..|| ||.|||..|||
Sbjct 5 -----------------------CTCCTTGCAAGGTCTCCTCA--------------------AGGAGACTTTT 35
Query 815 GTAATCTTTCGGGTGCAGATGCTGTGCCTACTCTCTCAGAAAATAGTCCTTCTGGGCAGAGAGATGTGAGTTTG 888
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 36 GT-------------CAGATGCTGTGCCTACTCTCTCAGAAAATAGTCCTTCTGGGCAGAGAGATGTGAGTTTG 96
Query 889 GACAAGAGATCAGATGGTATCTTTACAAATACTGTCACAGAAAACCTCTTGGAAACACCTTTAGAAAAGCAATC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 97 GACAAGAGATCAGATGGTATCTTTACAAATACTGTCACAGAAAACCTCTTGGAAACACCTTTAGAAAAGCAATC 170
Query 963 AGCTGCAGAAGGTCTTAAAACATTGACAATTTTACCAGCATGTTGGTCAAGTAAAGAGGAGTTTATCAGCCCCG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 171 AGCTGCAGAAGGTCTTAAAACATTGACAATTTTACCAGCATGTTGGTCAAGTAAAGAGGAGTTTATCAGCCCCG 244
Query 1037 ACTTAAGGGTATCAAAGTCAGATTCTACTTTCCATAACCAGGCCTCTGTAGAAACACTCTGTCTCTCTCCCTCA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 245 ACTTAAGGGTATCAAAGTCAGATTCTACTTTCCATAACCAGGCCTCTGTAGAAACACTCTGTCTCTCTCCCTCA 318
Query 1111 TTCAAAATATTTGACCGAGTGAAGGAGATTGTAATCAACAAGGCCTACCAGAAACCAGCACAATCCAGCATTCA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 319 TTCAAAATATTTGACCGAGTGAAGGAGATTGTAATCAACAAGGCCTACCAGAAACCAGCACAATCCAGCATTCA 392
Query 1185 GATGGATGATAAAATCCTCAAGACAACCACACGGGTTTCAACTGCTTCTGAGGGAGCATCTTCCTTTTCTCCTT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 393 GATGGATGATAAAATCCTCAAGACAACCACACGGGTTTCAACTGCTTCTGAGGGAGCATCTTCCTTTTCTCCTT 466
Query 1259 TATCCATGTCATCTCCTGATTTAGCCTCTCCAGAGAAGTCAGCTCATCTCTTATCACCAATTCTGGCCGGACCT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 467 TATCCATGTCATCTCCTGATTTAGCCTCTCCAGAGAAGTCAGCTCATCTCTTATCACCAATTCTGGCCGGACCT 540
Query 1333 TCCTTCTGGACTCTGTCCCATCAACAGTTGTCTTCTACCTCCTTTAAAGATGAAGATAAGACAGCCAAGCTGCA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 TCCTTCTGGACTCTGTCCCATCAACAGTTGTCTTCTACCTCCTTTAAAGATGAAGATAAGACAGCCAAGCTGCA 614
Query 1407 TCACTCCTTTGCTTCTAGGGGCCCAGTGTCTTCTGATGTAGAGGAAAATGATAGCCTCAATCTACTGGGAATTC 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 615 TCACTCCTTTGCTTCTAGGGGCCCAGTGTCTTCTGATGTAGAGGAAAATGATAGCCTCAATCTACTGGGAATTC 688
Query 1481 TTCCAAATAACTCTGATTCTGCTAAAAAGAATATAAGTCACATTTCTAGTAGTCACTGGGGGGAGTTTTCCACC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 689 TTCCAAATAACTCTGATTCTGCTAAAAAGAATATAAGTCACATTTCTAGTAGTCACTGGGGGGAGTTTTCCACC 762
Query 1555 CAAAATGTAGACCAGTTCATCCCTCTGTCCTGTTCTGGTTTTCAGTCAACCAAAGACTTCCCCCAGGAACCTGA 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 763 CAAAATGTAGACCAGTTCATCCCTCTGTCCTGTTCTGGTTTTCAGTCAACCAAAGACTTCCCCCAGGAACCTGA 836
Query 1629 AGCAAAGAATTCCATTAGTGTTCTTTTAAGGGAGGTAAAACGTGCGATCGCTAGATTACATGAAGATCTGAGCA 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 AGCAAAGAATTCCATTAGTGTTCTTTTAAGGGAGGTAAAACGTGCGATCGCTAGATTACATGAAGATCTGAGCA 910
Query 1703 CAGTGATCCAAGAACTTAATGTCATCAATAACATCTTGATGAGCATGAGTCTGAATAGTTCACAAATAAGCCAG 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 911 CAGTGATCCAAGAACTTAATGTCATCAATAACATCTTGATGAGCATGAGTCTGAATAGTTCACAAATAAGCCAG 984
Query 1777 TCTTCCCAGGTCCCCCAGTCTTCTGAGGGGAGCTCAGATCAGATC 1821
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 985 TCTTCCCAGGTCCCCCAGTCTTCTGAGGGGAGCTCAGATCAGATC 1029
