Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05185
- Subject:
- XR_001754270.1
- Aligned Length:
- 3847
- Identities:
- 477
- Gaps:
- 3334
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGTTTATTGATTGGAATTCTGCTGTAAGAAGAGCTGTTCCTTCGCCGATGATTGATGGATGGGTTTCTGTATGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTTACAGCATAAAGTTCTGCTCCTCGGGAGTAAATCTGCGAATCAGAGCCTTCCTCAGGAAGATAGCTCTACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATGACCCAGGGGAACAAGTACAAGCCGTGCATTCCAGCACCCAGGATTTCTTGTTTCATGTCATTTTAAAGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCATGGTTTCAGCTCCACGGGGCACATGGCATCTCCCTCTGCTCATCATAGTGTTTGGATCAAACAAATGAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACAGAAACATGACGGCCTCTACCAGCAAAAGCTCGAGGGTTGGAAAGAGTCCCCTGGCAGGGAATTGGCACCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTCGTGCCTATCCTCTCTCTCTGACTGCCTGCTGGAAATGCCCCCATCTCCCTTTGAGTCCTCCTCCCGGGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTCCTGTGACCTGTAACCTCTGTCCTGAAATCATCACAATGGCCAGGGTGGCCTCAGCTCAGGGCCTCTGTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCACCAAGGGCCTGGCACCAGGTGCCCAGTCTTCCAGTTGCGAGGGCAAGCAAACCCGTCATGAGCAACTCC 592
Query 1 --------------------ATGTGGACGCTGAAATCGTCCCTGGTCCTGCTTCTGTGCCTCACCTGCAGCTAT 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTTCCCCATCTCTGCTCACCATGTGGACGCTGAAATCGTCCCTGGTCCTGCTTCTGTGCCTCACCTGCAGCTAT 666
Query 55 GCCTTTATGTTCTCTTCTCTGAGACAGAAAACTAGCGAACCCCAGGGGAAGGTGCAATACGGAGAGCACTTTCG 128
|||||||||||||||||||||||||||||||||||||||||||||||||||||||..|..||||||||||||||
Sbjct 667 GCCTTTATGTTCTCTTCTCTGAGACAGAAAACTAGCGAACCCCAGGGGAAGGTGCCGTGTGGAGAGCACTTTCG 740
Query 129 GATTCGGCAGAATCTACCAGAGCACACCCAAGGCTGGCTTGGGAGCAAATGGCTCTGGCTTCTTTTTGTTGTTG 202
||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||.|.||||.|||||
Sbjct 741 GATTCGGCAGAACCTACCAGAGCACACCCAAGGCTGGCTTGGGAGCAAATGGCTCTGGCTTTTGTTTGCTGTTG 814
Query 203 TGCCGTTTGTGATACTGCAGTGTCAAAGAGACAGTGAGAAGAATAAGGAGCAGAGTCCTCCTGGCCTTCGAGGC 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGCCGTTTGTGATACTGCAGTGTCAAAGAGACAGTGAGAAGAATAAGGAGCAGAGTCCTCCTGGCCTTCGAGGC 888
Query 277 GGCCAACTTCACTCTCCATTAAAGAAAAAAAGAAATGCTTCCCCCAACAAAGACTGTGCATTCAATACCTTAAT 350
..||.|.|||.|.|||||.||||||||||...|||||||||.|...||||||||||||.||||||||||||||.
Sbjct 889 TTCCCATTTCGCACTCCACTAAAGAAAAATCAAAATGCTTCTCTTTACAAAGACTGTGTATTCAATACCTTAAA 962
Query 351 GGAACTCGAGGTGGAGCTTATGAAATTTGTGTCCAAAGTGCGGAATCTTAAACGTGCCATGGCAACAGGTAGTG 424
.|||||.||.|||||||||.||||||||||||||.||||||.||||||||||.||||||||||||||||.||||
Sbjct 963 CGAACTTGAAGTGGAGCTTTTGAAATTTGTGTCCGAAGTGCAGAATCTTAAAGGTGCCATGGCAACAGGCAGTG 1036
Query 425 GCAGTAACCTCAGGCTTCGAAAGTCAGAGATGCCTGCAGATCCATACCATGTCACGATCTGTGAAATATGGGGA 498
||||||||||||.||||||||.|||||||||||||||||||||||||||||||||.||||||.|||||||||||
Sbjct 1037 GCAGTAACCTCAAGCTTCGAAGGTCAGAGATGCCTGCAGATCCATACCATGTCACAATCTGTAAAATATGGGGA 1110
Query 499 GAAGAAAGCTCTAGC----------------------------------------------------------- 513
|||||||||||||||
Sbjct 1111 GAAGAAAGCTCTAGCTGAATGGATTTGTGTGTCAGGAGAGAAAAAAAAGAAAAAGTGAATGGGAGACCAGTAGC 1184
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1185 CATAGCAGTGATGGTTTTGTTTTTGCCTCTCTCATGTCATCTAGAGCTGTGGATGGTGAGGAGAGCACCGAAAG 1258
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1259 CTACATAATAGTTCACAGGAAGTTGCAAAGGTGGCACTGAGAGGTCCCGTGTGCTCTTCACCCAGTTTCCTCCT 1332
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1333 GTGGTTGCGTCTTAGTTGTACAGAACTTCATTGTGTGAACGTGCCATAGTTTACACAGCTGTGCTCTCAGATAT 1406
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1407 GAACACGCAGGGAGCATCCAAACATTTGAAATGACAAACAACAGTGCAGGGCCTAACCTTGTGCCTGTGTATTT 1480
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1481 TGGTATTGCTGAAGCTGTAATTTCAGGGTAGATACCTAGAAGAGTGATCGTAGGTTAGAAAGGTAAGTGCATAT 1554
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1555 GCAGTTGTGTTAGGTATTGCCAAATTTCCCTTTAAAAGGATTGTGCCAATTTGTATTCTCACAAGAGATGCTAG 1628
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1629 TACAAGTGTTGAGACTGATGTGTGGCTAGATGGCTGGAGAGCTGGCTGACATCTCACCCCGCAGCATCAATGTT 1702
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1703 AGAACCGGTGCTTACGCGGCTTGCAGTTACTAGAGAGAGCCACTAGATGGCAGATACAGCCCATCACAGACAAC 1776
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1777 AGTGAGCACACCTTTTTCCAGATTTTGCTTCAGGGGCCTTTGATAACAATTGTGTAAGTTGAAGTAATAGAATG 1850
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1851 TTTCTAAATGACTAATAGCACAACAACTAGCTGTTTTGTAGGTTGTTTTTTGTTTTTTTGAGACAGTCTCGCTC 1924
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1925 TCTTGTGCAGGCTGGAGTGCAGTAGCTTGATCTTGGCTCACTGCAGCCTCTACCTAACCTCCGAGTCCAAGTGA 1998
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1999 TCCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGGCACATGCCACCATGCCCAGCTAATTTTATTAATTTT 2072
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2073 TTGTAGAGACAGGGTTTCACTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTGTCTCG 2146
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2147 GCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACTCAGGCCACAACTAGCATTTGTAATACTAGTAGGA 2220
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2221 ACAGTAACATTATTTTTATTAGCAAGTAACATTTTTCATTTGATTATTCATTCATACAGTAAGTGTATATTTGT 2294
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2295 TCTATGTGCTGTTATAGGCACTGGGATGAAGAGATTTAAAAACAAACACAACCATCAGCCTGCATAGAGCTTTC 2368
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2369 ATTCTCCTGGGGGAGAGAGACAGTAAGGAAATACAAAAGCCAAATACATAGTCTATTGGGGAGCGTAGGTGCTA 2442
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2443 TGGAGAAAGCACAGAAGGGGAATAGGGTGTGTGTGCGTGCCTGTGTGCACATATATGTGCATGCGTGCATGTGT 2516
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2517 GTGTGTGTGTGTGTGTGTATGTGGTGAGCAGGGTAGTTAGTTTACAACCTTAAACAATGTGATCAGGGAAGGGC 2590
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2591 TCACTGAGAAGCAGCTGACTGAGAGAGGAAGCTGTAAGGACAAGCTGGGAGGGGAGGGTGTACGGCAGGAGGAA 2664
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2665 TGGGCCAGCAGAGAGCCCGCAGCAGGAGCAGCCTGGCATGATGGAGGTGCCAGTGCAGGGAGAGAAGGCGCGAG 2738
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2739 CAGCGTTGGAGCGGGGTGTGGACCTTGGAGACCCTGTAGGCTACTGAAAGGACTTTGGATTTGTCCCCGTGAGA 2812
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2813 AAGGAGAGCCATGGGAGAGTAAATCAAATCCCTCAGAAGCCCAGAAAGCAGCTGTCCTCAGCTCACTCCTCTCA 2886
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2887 CCGCAGATCACCCATTCACCAGATCCCAGGTACCGAACTGAAGATGGTAGAGGAAAAGTTTTTCCTGCTTAACA 2960
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2961 TATTCAACTCTCTACCCTCAATATATTTGGCTGTTATTATTCTGGTTTACATGTATCATAATTTAACCAGTTCC 3034
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3035 CTACTGGTGGATGTCTAGGTTTCCCCGATGTTTTGCTATTAAAAACACACATGGTACACGTTTTTCTAGATCGG 3108
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3109 GCAGGGTTTGCCCATCTCCACTTCAAGCAGCACAACCACCATCTGCCAGTGTTGGGGTTTACTCTACAGTCAGC 3182
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3183 AAACACTGTTGGCACATCCAGTCAGAGAAACTGAAAACAGAAAGCAGAAATGGCTTACACTGGACTAATTTTAG 3256
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3257 AATTTCTAAGTACATTTAAGTGATGACTCATCCCACTTAAATTCAAAGCTGTTTGTTGTGCCATCTGGCTCATC 3330
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3331 AGAACATGAAAGACTTCTCCTGCAACCTGGAAAAAGGCCAGAGAGGAAGACGAATGGAGGAGTCAACCCCATGG 3404
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3405 GAATGCTGACTGAGTGTTAGCTCCCCGTGGACAGGAATGTCACTGCATGAATAGGCTGCAGTATGTCTGGGCCT 3478
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3479 GTTTTTTTTTCATAAAATGTTCCCCCCCTGTTTTTTTCTTATTCCAAAGCAATGCAACAAAAAGCACAAGAAAT 3552
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3553 CAAAAAGGAAAAAATAGATATTGGACTTCATCAAAATGAAAAACTTTTGTGCTTCAAAGGAAATGGAAAGAAAG 3626
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3627 TGAAAAAACAACTGAGGGAATGGAAGAAAATATTCTCAAATCATCATCTAACAAAGGTTGTGTTAGTCTGTTCA 3700
Query 514 -------------------------------------------------------------------------- 513
Sbjct 3701 GGTTGCTGTAACAAAATATCATTTCAGGTCACCAGGTGGCTTAAACAACAGATTCAGTTGGCCCTCCGTATCCA 3774
Query 514 ------------------------------------------------------------------------- 513
Sbjct 3775 TGGGTTTCAGGCCTTCGACTTCAACCAACCTCAAATAAAAAATATTTTTAAAACCCAATACGGCCGAGTGCGG 3847
