Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05185
- Subject:
- XR_001754273.1
- Aligned Length:
- 2279
- Identities:
- 477
- Gaps:
- 1766
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGTTTATTGATTGGAATTCTGCTGTAAGAAGAGCTGTTCCTTCGCCGATGATTGATGGATGGGTTTCTGTATGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTTACAGCATAAAGTTCTGCTCCTCGGGAGTAAATCTGCGAATCAGAGCCTTCCTCAGGAAGATAGCTCTACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATGACCCAGGGGAACAAGTACAAGCCGTGCATTCCAGCACCCAGGATTTCTTGTTTCATGTCATTTTAAAGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCATGGTTTCAGCTCCACGGGGCACATGGCATCTCCCTCTGCTCATCATAGTGTTTGGATCAAACAAATGAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACAGAAACATGACGGCCTCTACCAGCAAAAGCTCGAGGGTTGGAAAGAGTCCCCTGGCAGGGAATTGGCACCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTCGTGCCTATCCTCTCTCTCTGACTGCCTGCTGGAAATGCCCCCATCTCCCTTTGAGTCCTCCTCCCGGGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTCCTGTGACCTGTAACCTCTGTCCTGAAATCATCACAATGGCCAGGGTGGCCTCAGCTCAGGGCCTCTGTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCACCAAGGGCCTGGCACCAGGTGCCCAGTCTTCCAGTTGCGAGGGCAAGCAAACCCGTCATGAGCAACTCC 592
Query 1 --------------------ATGTGGACGCTGAAATCGTCCCTGGTCCTGCTTCTGTGCCTCACCTGCAGCTAT 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTTCCCCATCTCTGCTCACCATGTGGACGCTGAAATCGTCCCTGGTCCTGCTTCTGTGCCTCACCTGCAGCTAT 666
Query 55 GCCTTTATGTTCTCTTCTCTGAGACAGAAAACTAGCGAACCCCAGGGGAAGGTGCAATACGGAGAGCACTTTCG 128
|||||||||||||||||||||||||||||||||||||||||||||||||||||||..|..||||||||||||||
Sbjct 667 GCCTTTATGTTCTCTTCTCTGAGACAGAAAACTAGCGAACCCCAGGGGAAGGTGCCGTGTGGAGAGCACTTTCG 740
Query 129 GATTCGGCAGAATCTACCAGAGCACACCCAAGGCTGGCTTGGGAGCAAATGGCTCTGGCTTCTTTTTGTTGTTG 202
||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||.|.||||.|||||
Sbjct 741 GATTCGGCAGAACCTACCAGAGCACACCCAAGGCTGGCTTGGGAGCAAATGGCTCTGGCTTTTGTTTGCTGTTG 814
Query 203 TGCCGTTTGTGATACTGCAGTGTCAAAGAGACAGTGAGAAGAATAAGGAGCAGAGTCCTCCTGGCCTTCGAGGC 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGCCGTTTGTGATACTGCAGTGTCAAAGAGACAGTGAGAAGAATAAGGAGCAGAGTCCTCCTGGCCTTCGAGGC 888
Query 277 GGCCAACTTCACTCTCCATTAAAGAAAAAAAGAAATGCTTCCCCCAACAAAGACTGTGCATTCAATACCTTAAT 350
..||.|.|||.|.|||||.||||||||||...|||||||||.|...||||||||||||.||||||||||||||.
Sbjct 889 TTCCCATTTCGCACTCCACTAAAGAAAAATCAAAATGCTTCTCTTTACAAAGACTGTGTATTCAATACCTTAAA 962
Query 351 GGAACTCGAGGTGGAGCTTATGAAATTTGTGTCCAAAGTGCGGAATCTTAAACGTGCCATGGCAACAGGTAGTG 424
.|||||.||.|||||||||.||||||||||||||.||||||.||||||||||.||||||||||||||||.||||
Sbjct 963 CGAACTTGAAGTGGAGCTTTTGAAATTTGTGTCCGAAGTGCAGAATCTTAAAGGTGCCATGGCAACAGGCAGTG 1036
Query 425 GCAGTAACCTCAGGCTTCGAAAGTCAGAGATGCCTGCAGATCCATACCATGTCACGATCTGTGAAATATGGGGA 498
||||||||||||.||||||||.|||||||||||||||||||||||||||||||||.||||||.|||||||||||
Sbjct 1037 GCAGTAACCTCAAGCTTCGAAGGTCAGAGATGCCTGCAGATCCATACCATGTCACAATCTGTAAAATATGGGGA 1110
Query 499 GAAGAAAGCTCTAGC----------------------------------------------------------- 513
|||||||||||||||
Sbjct 1111 GAAGAAAGCTCTAGCTGAATGGATTTGTGTGTCAGGAGAGAAAAAAAAGAAAAAGTGAATGGGAGACCAGTAGC 1184
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1185 CATAGCAGTGATGGTTTTGTTTTTGCCTCTCTCATGTCATCTAGAGCTGTGGATGGTGAGGAGAGCACCGAAAG 1258
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1259 CTACATAATAGTTCACAGGAAGTTGCAAAGGTGGCACTGAGAGGTCCCGTGTGCTCTTCACCCAGTTTCCTCCT 1332
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1333 GTGGTTGCGTCTTAGATCCCAGGTACCGAACTGAAGATGGTAGAGGAAAAGTTTTTCCTGCTTAACATATTCAA 1406
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1407 CTCTCTACCCTCAATATATTTGGCTGTTATTATTCTGGTTTACATGTATCATAATTTAACCAGTTCCCTACTGG 1480
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1481 TGGATGTCTAGGTTTCCCCGATGTTTTGCTATTAAAAACACACATGGTACACGTTTTTCTAGATCGGGCAGGGT 1554
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1555 TTGCCCATCTCCACTTCAAGCAGCACAACCACCATCTGCCAGTGTTGGGGTTTACTCTACAGTCAGCAAACACT 1628
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1629 GTTGGCACATCCAGTCAGAGAAACTGAAAACAGAAAGCAGAAATGGCTTACACTGGACTAATTTTAGAATTTCT 1702
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1703 AAGTACATTTAAGTGATGACTCATCCCACTTAAATTCAAAGCTGTTTGTTGTGCCATCTGGCTCATCAGAACAT 1776
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1777 GAAAGACTTCTCCTGCAACCTGGAAAAAGGCCAGAGAGGAAGACGAATGGAGGAGTCAACCCCATGGGAATGCT 1850
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1851 GACTGAGTGTTAGCTCCCCGTGGACAGGAATGTCACTGCATGAATAGGCTGCAGTATGTCTGGGCCTGTTTTTT 1924
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1925 TTTCATAAAATGTTCCCCCCCTGTTTTTTTCTTATTCCAAAGCAATGCAACAAAAAGCACAAGAAATCAAAAAG 1998
Query 514 -------------------------------------------------------------------------- 513
Sbjct 1999 GAAAAAATAGATATTGGACTTCATCAAAATGAAAAACTTTTGTGCTTCAAAGGAAATGGAAAGAAAGTGAAAAA 2072
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2073 ACAACTGAGGGAATGGAAGAAAATATTCTCAAATCATCATCTAACAAAGGTTGTGTTAGTCTGTTCAGGTTGCT 2146
Query 514 -------------------------------------------------------------------------- 513
Sbjct 2147 GTAACAAAATATCATTTCAGGTCACCAGGTGGCTTAAACAACAGATTCAGTTGGCCCTCCGTATCCATGGGTTT 2220
Query 514 ----------------------------------------------------------- 513
Sbjct 2221 CAGGCCTTCGACTTCAACCAACCTCAAATAAAAAATATTTTTAAAACCCAATACGGCCG 2279
