Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05289
Subject:
NR_027786.1
Aligned Length:
1472
Identities:
818
Gaps:
645

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAAGCAGGGCCTGGAACTGCAGGATACACTCCCCTCCTGCTACCTAGGCAGGCGTGAGGGTGTGACGGCCGCGC  74

Query    1  ------------------ATGAGTGAGAACGCCGCACCAGGTCTGATCTCAGAGCTGAAGCTGGCTGTGCCCTG  56
                              |||..|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  ATTCGCCAGACGAGAGCGATGGCTGAGAACGCCGCACCAGGTCTGATCTCAGAGCTGAAGCTGGCTGTGCCCTG  148

Query   57  GGGCCACATCGCAGCCAAAGCCTGGGGCTCCCTGCAGGGCCCTCCAGTTCTCTGCCTGCACGGCTGGCTGGACA  130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGGCCACATCGCAGCCAAAGCCTGGGGCTCCCTGCAGGGCCCTCCAGTTCTCTGCCTGCACGGCTGGCTGGACA  222

Query  131  ATGCCAGCTCCTTCGACAGACTCATCCCTCTTCTCCCGCAAGACTTTTATTACGTTGCCATGGATTTCGGAGGT  204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATGCCAGCTCCTTCGACAGACTCATCCCTCTTCTCCCGCAAGACTTTTATTACGTTGCCATGGATTTCGGAGGT  296

Query  205  CATGGGCTCTCGTCCCATTACAGCCCAGGTGTCCCATATTACCTCCAGACTTTTGTGAGTGAGATCCGAAGAGT  278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CATGGGCTCTCGTCCCATTACAGCCCAGGTGTCCCATATTACCTCCAGACTTTTGTGAGTGAGATCCGAAGAGT  370

Query  279  TGTGGCAGCCTTGAAATGGAATCGATTCTCCATTCTGGGCCACAGCTTCGGTGGCGTCGTGGGCGGAATGTTTT  352
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGTGGCAGCCTTGAAATGGAATCGATTCTCCATTCTGGGCCACAGCTTCGGTGGCGTCGTGGGCGGAATGTTTT  444

Query  353  TCTGTACCTTCCCCGAGATGGTGGATAAACTTATCTTGCTGGACACGCCGCTCTTTCTCCTGGAATCAGATGAA  426
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCTGTACCTTCCCCGAGATGGTGGATAAACTTATCTTGCTGGACACGCCGCTCTTTCTCCTGGAATCAGATGAA  518

Query  427  ATGGAGAACTTGCTGACCTACAAGCGGAGAGCCATAGAGCACGTGCTGCAGGTAGAGGCCTCCCAGGAGCCCTC  500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ATGGAGAACTTGCTGACCTACAAGCGGAGAGCCATAGAGCACGTGCTGCAGGTAGAGGCCTCCCAGGAGCCCTC  592

Query  501  GCACGTGTTCAGCCTGAAGCAGCTGCTGCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTGAGGAGTGCGGGG  574
            ||||||||||||||||||||||||||||||||                                          
Sbjct  593  GCACGTGTTCAGCCTGAAGCAGCTGCTGCAGA------------------------------------------  624

Query  575  AGCTTCTCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGTCTGGTTCTGAACAGAGACCAGAGGCTCGCCTGG  648
                                                                                     |
Sbjct  625  -------------------------------------------------------------------------G  625

Query  649  GCAGAGAACAGCATTGACTTCATCAGCAGGGAGCTGTGTGCGCATTCCATCAGGAAGCTGCAGGCCCATGTCCT  722
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  626  GCAGAGAACAGCATTGACTTCGTCAGCAGGGAGCTGTGTGCGCATTCCATCAGGAAGCTGCAGGCCCATGTCCT  699

Query  723  GTTGATCAAAGCAGTCCACGGATATTTTGATTCAAGACAGAATTACTCTGAGAAGGAGTCCCTGTCGTTCATGA  796
            |||||||||||||||||||||||||||||||.|||||.|||||||||||||.||||||||||||||||||||||
Sbjct  700  GTTGATCAAAGCAGTCCACGGATATTTTGATCCAAGAGAGAATTACTCTGACAAGGAGTCCCTGTCGTTCATGA  773

Query  797  TAGACACGATGAAATCCACCCTCAAAG-----------------------------------------------  823
            |||||||.|||||||||||||||||||                                               
Sbjct  774  TAGACACAATGAAATCCACCCTCAAAGAGGACTACTTCGGATACAATCACAGCAACCCTGGCCTCGGCCCTGCC  847

Query  824  -----------------------------------------------------------------AGCAGTTCC  832
                                                                             |||.|||||
Sbjct  848  CTGTCCCTGCCATGCAACTTCACAACTCAGCTGGCCTAGACCCCTGGGAGGCCTCCAAGTCCCTAAGCGGTTCC  921

Query  833  AGTTTGTGGAAGTCCCAGGCAATCACTGTGTCCACATGAGCGAACCCCAGCACGTGGCCAGTATCATCAGCTCC  906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  922  AGTTTGTGGAAGTCCCAGGCAATCACTGTGTCCACATGAGCGAACCCCAGCACGTGGCCAGTATCATCAGCTCC  995

Query  907  TTCTTACAGTGCACACACATGCTCCCAGCCCAGCTG--------------------------------------  942
            |||||||||||||||||||.||||||||||||||||                                      
Sbjct  996  TTCTTACAGTGCACACACACGCTCCCAGCCCAGCTGTAGCTCTGGGCCTGGAACTATGAAGACCTAGTGCTCCC  1069

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1070  AGACTCAACACTGGGACTCTGAGTTCCTGAGCCCCACAACAAGGCCAGGGATGGTGGGGACAGGCCTCACTAGT  1143

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1144  CTTGAGGCCCAGCCTAGGATGGTAGTCAGGGGAAGGAGCGAGATTCCAACTTCAACATCTGTGACCTCAAGGGG  1217

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1218  GAGACAGAGTCTGGGTTCCAGGGCTGCTGTCTCCTGGCTAATAATCTCCAGCCAGCTGGAGGAAGGAAGGGCGG  1291

Query  943  ------------------------------------------------------------------  942
                                                                              
Sbjct 1292  GCTGGGCCCACCTAGCCTTTCCCTGCTGCCCAACTGGATGGAAAATAAAAGGTTCTTGTATTCTCA  1357

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