Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05289
- Subject:
- NR_104301.2
- Aligned Length:
- 2035
- Identities:
- 907
- Gaps:
- 1128
Alignment
Query 1 -----------------------------------------------------------------ATGAGTGAG 9
|||||||||
Sbjct 1 ACTCTGCTCCTGCGACCTAGCCAGGCGTGAGGGAGTGACAGCAGCGCATTCGCGGGACGAGAGCGATGAGTGAG 74
Query 10 AACGCCGCACCAGGTCTGATCTCAGAGCTGAAGCTGGCTGTGCCCTGGGGCCACATCGCAGCCAAAGCCTGGGG 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AACGCCGCACCAGGTCTGATCTCAGAGCTGAAGCTGGCTGTGCCCTGGGGCCACATCGCAGCCAAAGCCTGGGG 148
Query 84 CTCCCTGCAGGGCCCTCCAGTTCTCTGCCTGCACGGCTGGCTGGACAATGCCAGCTCCTTCGACAGACTCATCC 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTCCCTGCAGGGCCCTCCAGTTCTCTGCCTGCACGGCTGGCTGGACAATGCCAGCTCCTTCGACAGACTCATCC 222
Query 158 CTCTTCTCCCGCAAGACTTTTATTACGTTGCCATGGATTTCGGAGGTCATGGGCTCTCGTCCCATTACAGCCCA 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTCTTCTCCCGCAAGACTTTTATTACGTTGCCATGGATTTCGGAGGTCATGGGCTCTCGTCCCATTACAGCCCA 296
Query 232 GGTGTCCCATATTACCTCCAGACTTTTGTGAGTGAGATCCGAAGAGTTGTGGCAGCCTTGAAATGGAATCGATT 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGTGTCCCATATTACCTCCAGACTTTTGTGAGTGAGATCCGAAGAGTTGTGGCAGCCTTGAAATGGAATCGATT 370
Query 306 CTCCATTCTGGGCCACAGCTTCGGTGGCGTCGTGGGCGGAATGTTTTTCTGTACCTTCCCCGAGATGGTGGATA 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTCCATTCTGGGCCACAGCTTCGGTGGCGTCGTGGGCGGAATGTTTTTCTGTACCTTCCCCGAGATGGTGGATA 444
Query 380 AACTTATCTTGCTGGACACGCCGCTCTTTCTCCTGGAATCAGATGAAATGGAGAACTTGCTGACCTACAAGCGG 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AACTTATCTTGCTGGACACGCCGCTCTTTCTCCTGGAATCAGATGAAATGGAGAACTTGCTGACCTACAAGCGG 518
Query 454 AGAGCCATAGAGCACGTGCTGCAGGTAGAGGCCTCCCAGGAGCCCTCGCACGTGTTCAGCCTGAAGCAGCTGCT 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGAGCCATAGAGCACGTGCTGCAGGTAGAGGCCTCCCAGGAGCCCTCGCACGTGTTCAGCCTGAAGCAGCTGCT 592
Query 528 GCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTGAGGAGTGCGGGGAGCTTCTCCTGCAAAGAGGAACCACGA 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTGAGGAGTGCGGGGAGCTTCTCCTGCAAAGAGGAACCACGA 666
Query 602 AGGTGGCCACAGGTCTGGTTCTGAACAGAGACCAGAGGCTCGCCTGGGCAGAGAACAGCATTGACTTCATCAGC 675
||||||||||| ||||||||||||||||||||||||||||
Sbjct 667 AGGTGGCCACA-----------------------------------GGCAGAGAACAGCATTGACTTCATCAGC 705
Query 676 AGGGAGCTGTGTGCGCATTCCATCAGGAAGCTGCAGGCCCATGTCCTGTTGATCAA------------------ 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 AGGGAGCTGTGTGCGCATTCCATCAGGAAGCTGCAGGCCCATGTCCTGTTGATCAAGTAAGTCTGGACCCATCC 779
Query 732 -------------------------------------------------------------------------- 731
Sbjct 780 CCTTCAGCCACCCGCCAAGGAGACATGGGCGCCAGGAATCTCCGGGAGGGGGCCCTGGCATGAGGCTCCAAGTT 853
Query 732 -------------------------------------------------------------------------- 731
Sbjct 854 CTCTGCGTGTCGACCACATCGCTAAGGCTCAAGATCTTTTTTGGGAAGCCCCCCTGGCAGCAGGGTCATGGAAG 927
Query 732 -------------------------------------------------------------------------- 731
Sbjct 928 GAGGAAGGTCAGAGGAGGGGAGGGCTCGGGCAGCAGGGGATGGGCCGGGGCTGTCCCATGCCTTTCCACAGGTG 1001
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1002 TCAGCGGGGGGCATGCCCAGGTAAGGCTCCATAACCAGTGAGCCCAGTCTCGGCTGACTGCAACCTCTGTCTCC 1075
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1076 TGGATTCAAACGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCAGGCCTGGCTT 1149
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1150 ATTTTTGTATTTTTAGTAGAGACGAGGTTTCGCCATGTTGGCCAGGCTGCTCTCCATCTCCTGACCTCATGATC 1223
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1224 CGCCCGCCTCGGCCTCCCAGTGTTGGGATTACAGGCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTA 1297
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1298 AGCCATAAAAAGAAACGAAGCACTGACACGGGCTCCAGCATGGATGAGCCTTTAAAACATCGCGCTAAGTGGAC 1371
Query 732 -------------------------------------------------------------------------- 731
Sbjct 1372 GAATTCAGACACAACCGTCTACGTGTTGTATGGCTGCATTCACGTTCAAGTCAAGTCCAAATAGGGCACACTGC 1445
Query 732 --------------AGCAGTCCACGGATATTTTGATTCAAGACAGAATTACTCTGAGAAGGAGTCCCTGTCGTT 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446 AGAGACAAAGCCAGAGCAGTCCACGGATATTTTGATTCAAGACAGAATTACTCTGAGAAGGAGTCCCTGTCGTT 1519
Query 792 CATGATAGACACGATGAAATCCACCCTCAAAGAGCAGTTCCAGTTTGTGGAAGTCCCAGGCAATCACTGTGTCC 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1520 CATGATAGACACGATGAAATCCACCCTCAAAGAGCAGTTCCAGTTTGTGGAAGTCCCAGGCAATCACTGTGTCC 1593
Query 866 ACATGAGCGAACCCCAGCACGTGGCCAGTATCATCAGCTCCTTCTTACAGTGCACACACATGCTCCCAGCCCAG 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1594 ACATGAGCGAACCCCAGCACGTGGCCAGTATCATCAGCTCCTTCTTACAGTGCACACACATGCTCCCAGCCCAG 1667
Query 940 CTG----------------------------------------------------------------------- 942
|||
Sbjct 1668 CTGTAGCTCTGGGCCTGGAACTATGAAGACCTAGTGCTCCCAGACTCAACACTGGGACTCTGAGTTCCTGAGCC 1741
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1742 CCACAACAAGGCCAGGGATGGTGGGGACAGGCCTCACTAGTCTTGAGGCCCAGCCTAGGATGGTAGTCAGGGGA 1815
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1816 AGGAGCGAGATTCCAACTTCAACATCTGTGACCTCAAGGGGGAGACAGAGTCTGGGTTCCAGGGCTGCTTTCTC 1889
Query 943 -------------------------------------------------------------------------- 942
Sbjct 1890 CTGGCTAATAATAAATATCCAGCCAGCTGGAGGAAGGAAGGGCAGGCTGGGCCCACCTAGCCTTTCCCTGCTGC 1963
Query 943 ------------------------------------- 942
Sbjct 1964 CCAACTGGATGGAAAATAAAAGGTTCTTGTATTCTCA 2000
