Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_05289
• Subject: XR_244363.3
• Aligned Length: 1425
• Identities: 827
• Gaps: 598

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGGGGCGGGGACTGCTGGAGTTGCGGGGCCTGCCTGGGGTAGGGCGGGGCAGGACAGCTTGGAGATAGGGCCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAATTGCGGGCGTCACTCTGCTCCTGCGACCTAGCCAGGCGTGAGGGAGTGACAGCAGCGCATTCGCGGGACGA  148

Query    1  -----ATGAGTGAGAACGCCGCACCAGGTCTGATCTCAGAGCTGAAGCTGGCTGTGCCCTGGGGCCACATCGCA  69
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAGCGATGAGTGAGAACGCCGCACCAGGTCTGATCTCAGAGCTGAAGCTGGCTGTGCCCTGGGGCCACATCGCA  222

Query   70  GCCAAAGCCTGGGGCTCCCTGCAGGGCCCTCCAGTTCTCTGCCTGCACGGCTGGCTGGACAATGCCAGCTCCTT  143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCAAAGCCTGGGGCTCCCTGCAGGGCCCTCCAGTTCTCTGCCTGCACGGCTGGCTGGACAATGCCAGCTCCTT  296

Query  144  CGACAGACTCATCCCTCTTCTCCCGCAAGACTTTTATTACGTTGCCATGGATTTCGGAGGTCATGGGCTCTCGT  217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CGACAGACTCATCCCTCTTCTCCCGCAAGACTTTTATTACGTTGCCATGGATTTCGGAGGTCATGGGCTCTCGT  370

Query  218  CCCATTACAGCCCAGGTGTCCCATATTACCTCCAGACTTTTGTGAGTGAGATCCGAAGAGTTGTGGCAGCCTTG  291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCCATTACAGCCCAGGTGTCCCATATTACCTCCAGACTTTTGTGAGTGAGATCCGAAGAGTTGTGGCAGCCTTG  444

Query  292  AAATGGAATCGATTCTCCATTCTGGGCCACAGCTTCGGTGGCGTCGTGGGCGGAATGTTTTTCTGTACCTTCCC  365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAATGGAATCGATTCTCCATTCTGGGCCACAGCTTCGGTGGCGTCGTGGGCGGAATGTTTTTCTGTACCTTCCC  518

Query  366  CGAGATGGTGGATAAACTTATCTTGCTGGACACGCCGCTCTTTCTCCTGGAATCAGATGAAATGGAGAACTTGC  439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CGAGATGGTGGATAAACTTATCTTGCTGGACACGCCGCTCTTTCTCCTGGAATCAGATGAAATGGAGAACTTGC  592

Query  440  TGACCTACAAGCGGAGAGCCATAGAGCACGTGCTGCAGGTAGAGGCCTCCCAGGAGCCCTCGCACGTGTTCAGC  513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGACCTACAAGCGGAGAGCCATAGAGCACGTGCTGCAGGTAGAGGCCTCCCAGGAGCCCTCGCACGTGTTCAGC  666

Query  514  CTGAAGCAGCTGCTGCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTGAGGAGTGCGGGGAGCTTCTCCTGCA  587
            |||||||||||||||||||                                                       
Sbjct  667  CTGAAGCAGCTGCTGCAGA-------------------------------------------------------  685

Query  588  AAGAGGAACCACGAAGGTGGCCACAGGTCTGGTTCTGAACAGAGACCAGAGGCTCGCCTGGGCAGAGAACAGCA  661
                                                                        ||||||||||||||
Sbjct  686  ------------------------------------------------------------GGCAGAGAACAGCA  699

Query  662  TTGACTTCATCAGCAGGGAGCTGTGTGCGCATTCCATCAGGAAGCTGCAGGCCCATGTCCTGTTGATCAAAGCA  735
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  700  TTGACTTCATCAGCAGGGAGCTGTGTGCGCATTCCATCAGGAAGCTGCAGGCCCATGTCCTGTTGATCAAAGCA  773

Query  736  GTCCACGGATATTTTGATTCAAGACAGAATTACTCTGAGAAGGAGTCCCTGTCGTTCATGATAGACACGATGAA  809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  774  GTCCACGGATATTTTGATTCAAGACAGAATTACTCTGAGAAGGAGTCCCTGTCGTTCATGATAGACACGATGAA  847

Query  810  ATCCACCCTCAAAGAGCAGTTCCAGTTTGTGGAAGTCCCAGGCAATCACTGTGTCCACATGAGCGAACCCCAGC  883
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  848  ATCCACCCTCAAAGAGCAGTTCCAGTTTGTGGAAGTCCCAGGCAATCACTGTGTCCACATGAGCGAACCCCAGC  921

Query  884  ACGTGGCCAGTATCATCAGCTCCTTCTTACAGTGCACACACATGCTCCCAGCCCAGCTG---------------  942
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               
Sbjct  922  ACGTGGCCAGTATCATCAGCTCCTTCTTACAGTGCACACACATGCTCCCAGCCCAGCTGTAGCTCTGGGCCTGG  995

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct  996  AACTATGAAGACCTAGTGCTCCCAGACTCAACACTGGGACTCTGAGTTCCTGAGCCCCACAACAAGGCCAGGGA  1069

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1070  TGGTGGGGACAGGCCTCACTAGTCTTGAGGCCCAGCCTAGGATGGTAGTCAGGGGAAGGAGCGAGATTCCAACT  1143

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1144  TCAACATCTGTGACCTCAAGGGGGAGACAGAGTCTGGGTTCCAGGGCTGCTTTCTCCTGGCTAATAATAAATAT  1217

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1218  CCAGCCAGCTGGAGGAAGGAAGGGCAGGCTGGGCCCACCTAGCCTTTCCCTGCTGCCCAACTGGATGGAAAATA  1291

Query  943  -------------------  942
                               
Sbjct 1292  AAAGGTTCTTGTATTCTCA  1310