Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05389
- Subject:
- XR_001738718.1
- Aligned Length:
- 4084
- Identities:
- 744
- Gaps:
- 3340
Alignment
Query 1 -----------------------------------ATGGCGCTGTGCGAGGCCGCGGGCTGCGGGAGTGCCCTG 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 1 GCTGGCGGCCCCGCCCCGCCCCGCCCGGCTGCTCCATGGCGCTGTGCGAGGCCGCGGGCTGCGGGAGTGCCCTG 74
Query 40 CTCTGGCCTCGCTTGTTGCTCTTCGGGGACTCCATCACCCAGTTTTCCTTCCAGCAGGGTGGATGGGGAGCATC 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCTGGCCTCGCTTGTTGCTCTTCGGGGACTCCATCACCCAGTTTTCCTTCCAGCAGGGTGGATGGGGAGCATC 148
Query 114 GCTGGCTGACAGGCTGGTCAGAAAATGTGATGTTCTGAATCGTGGATTTTCAGGTTACAATACCAGGTGGGCCA 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTGGCTGACAGGCTGGTCAGAAAATGTGATGTTCTGAATCGTGGATTTTCAGGTTACAATACCAGGTGGGCCA 222
Query 188 AAATTATCCTTCCAAGATTAATCAGGAAAGGAAACAGTTTGGACATCCCAGTAGCAGTTACAATTTTCTTTGGG 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAATTATCCTTCCAAGATTAATCAGGAAAGGAAACAGTTTGGACATCCCAGTAGCAGTTACAATTTTCTTTGGG 296
Query 262 GCCAATGACAGTGCACTAAAAGATGAGAATCCCAAGCAGCACATTCCCCTGGAGGAGTACGCTGCGAACCTAAA 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCCAATGACAGTGCACTAAAAGATGAGAATCCCAAGCAGCACATTCCCCTGGAGGAGTACGCTGCGAACCTAAA 370
Query 336 GAGCATGGTGCAGTACCTGAAGTCCGTGGACATCCCTGAGAATCGAGTCATTCTCATCACGCCGACCCCACTTT 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGCATGGTGCAGTACCTGAAGTCCGTGGACATCCCTGAGAATCGAGTCATTCTCATCACGCCGACCCCACTTT 444
Query 410 GTGAAACAGCCTGGGAAGAACAGTGCATCATACAAGGTTGCAAACTAAATCGCCTGAACTCTGTTGTTGGTGAA 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTGAAACAGCCTGGGAAGAACAGTGCATCATACAAGGTTGCAAACTAAATCGCCTGAACTCTGTTGTTGGTGAA 518
Query 484 TATGCCAATGCGTGTTTACAAGTGGCCCAAGACTGTGGGACTGACGTACTTGACCTGTGGACCCTGATGCAGGA 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TATGCCAATGCGTGTTTACAAGTGGCCCAAGACTGTGGGACTGACGTACTTGACCTGTGGACCCTGATGCAGGA 592
Query 558 CAGCCAGGACTTCTCATCTTATTTATCAGATGGACTACATTTGTCTCCAAAGGGGAATGAATTTTTGTTCTCGC 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGCCAGGACTTCTCATCTTATTTATCAGATGGACTACATTTGTCTCCAAAGGGGAATGAATTTTTGTTCTCGC 666
Query 632 ATCTCTGGCCTTTGATAGAGAAAAAGGTCTCTTCTCTACCTTTGCTGCTTCCTTACTGGCGGGATGTAGCAGAA 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATCTCTGGCCTTTGATAGAGAAAAAGGTCTCTTCTCTACCTTTGCTGCTTCCTTACTGGCGGGATGTAGCAGAA 740
Query 706 GCAAAACCTGAATTAAGTCTGCTGGGAGATGGAGACCAT----------------------------------- 744
|||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCAAAACCTGAATTAAGTCTGCTGGGAGATGGAGACCATTAGCCAATCACAGGAGACCCAAATCTGCTTGTTAT 814
Query 745 -------------------------------------------------------------------------- 744
Sbjct 815 CTACAGAACTCAAAGTTGTCAATACGTAGAGCATCGACATAGGGCACACAGCGGCCAGAAAGGTCCCTGCAGCA 888
Query 745 -------------------------------------------------------------------------- 744
Sbjct 889 CACCTTGCAGGAGTTGTCAGTTTCTGGAACAGAGAACACGCATTGACAGCTGGATTGTTCTGAGACCTGCCTCT 962
Query 745 -------------------------------------------------------------------------- 744
Sbjct 963 CCTCCTGCCTCCTCTTTCCTCCCTGACCATGCTCCCAAAGAGCCTGCCATATGGCCTGAAACTGCAGCAAGAAG 1036
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1037 AAACACCAACAGGATAGGTCTCCCAGGTATGGTGGATCTGCATGCAGAGATGCCTGTCTCCAGACACCACCCTG 1110
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1111 CCCTTCCCCATCCCCTCATCCTCGGCTTGGATCTCACCACTGCTGTCATTCGCACAACCTCCAAATGGAGGAAG 1184
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1185 GGAGCCTGGCAGACAAAGGCCATGTTTTCTCCTGCTGCTGGACTGGGAATAAAACTGCTCACCATTACATGCAC 1258
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1259 AGGACTCCAGCTGCTGTTCCCTCTCGCAGAAAGGGATGCATTTCCCATCCTTACACTTGCCAAGATCCAAGCAA 1332
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1333 ACAGTGTCATCTTCAGCATTTCCTGGAGGCGGGCACTCACTGCTATTACCTGGAAGCAAACACCAGTCATAACA 1406
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1407 AAAAGAATGAGTCACAGGTCCACCAGTTCTACAGGTGCATAATACGCTGTTTCTCATACAAGTGAGCATCTTAC 1480
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1481 CTTGCAAAAGCAAAAAGTGACCTACAGAGCTAGGACAAGAGCCTGCATCTCACCAGCAATCAGCATTTAAATGG 1554
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1555 GAGTGCCTGGCTATGTGCCAGGCTAGGCTGCATGAGTCCCTGGCCTCCCAAGCCCCAGTTAGAATGCATGGTCT 1628
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1629 CCACTTCTGCATCTCACAGTCATATATAAAAGAATATCCTATGTGCTATTACTTAGAATAAATTGCAAACTTTG 1702
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1703 TATGAAGGCTTAAAAGAACTCCACGGCCTTCCCTATCTGGCCCTGACTTCATCGCACACAACTCTCCCACAGCC 1776
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1777 CACTGCTTTGGCTATGACAACCTCCATTCAGTTCCTTCAATATTAACAGATACTATTCCTTCTACCTGGAATGC 1850
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1851 TGGTGTTTCCACTCTTTTGGGGCAATTAGCTGGCTTTTCTTATGGATTAAGTTTTGTCTCAAAGGTTTTCTGAG 1924
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1925 ATATCCCTGAGGATGCTAAGTTGATGTGGCCTCCCACTTCCATTATGCACTATCACACTCCTTCTCTCCTTCAT 1998
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1999 TGCATATGTTTTGCAATTTATATATATATATTTAATGTTATTTTCTGTTTTCCCTCTACTAGACTGGAAAGCCC 2072
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2073 CATGACAGCAATGATCAAATCTATTAAGTTATCTCCAATCCCTATCATATTATAGGTATACTACAAATATTTCT 2146
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2147 TAAATAAATCAATTATTCTTTTTATTTTTCTTTTGAGACAGGGTCTCAGTCTGTCACCCAGGCTGGAAGGCAGG 2220
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2221 GGTGTGATCATAGCTTACTGCAGCCTCAAACTCCTAGGTTCCGGCAATCCTCCTGCCTCAGCCTCACAAGTACC 2294
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2295 TAGGATTTCAGGCGTACGCCACCATACCTGGCTAATTTTCTTTCTTTTTTTTTGAGAGACGAGATCTCCCTGTG 2368
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2369 TTGACCATGCTGGTGTAAAACTGCTGGGCTCAAGGGATCCTCCCACCTTGGCCTTCCAAGTGCTGGAATGATAG 2442
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2443 GCATGAGCCACTGTGCCCAGGCCAATAATGCCAAAGAAAACCCACCAAAGAAAGTTAAACTGGGAGAGACAGGA 2516
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2517 TGGAATGAGTGAATCATTCTGGAAAATGAATAGCACAAGTAGCTAAAAGTCAACACAAATAGAGGAGGAGAAAA 2590
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2591 AAAACACTTTATGAAAGCAATGGACTATATATCCACAGCTCTGGACTGGCCTTTCAGCTGAAGAATGAAGCCAA 2664
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2665 TCAAAAGAATTCTGACTTAGAGGGTTTCAGAGCAGTAACACAAAATGTACAGAAAATCTGGCCAGTTTCAAACA 2738
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2739 AAAGTGATGGTTTATTAAGTACCCAACAGATAACCAGGCACTTTGCCTCTGGTTCTCATAAAACCTTTCATGAG 2812
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2813 CACTGGGCATTCATCATGTCAACAGTCATTTAACAAACTATTACTGAAAGTATGATGTCCAGTGAGCTCAGGGA 2886
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2887 AGGTTTATATTGTGGATCATTATTGTATTTTTGGTATATGATACTGCCCTGATACATTAAAAAATGCTCAATAA 2960
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2961 ATATCTGTTGAGCATCTGTTCTTAAAAGACTAAAGTCAGAGTATTAGACAGGTAGGAAAATAATTCTGAAAATG 3034
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3035 GTATCATCTATCTAGCATGGTCCCCAAAGTTTAGCATGCATGGAAATCACCTGACAGAAGGTTACACAGCACAG 3108
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3109 ACTGCTGGCCTCCCTTCCCACATTTTTTGATGCAGTAGATCCAGGGAGGGGACTGACAATTTCCATTTCTAATA 3182
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3183 AGCTCCCAGGTGATGCTGCTGCTGCTGGTTGTGAAATGCTAATTGCTTTTTTTCTTTCTTCTTCTTTTTTTTTT 3256
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3257 TTTTTTTTGAGGTTGTTGTTCTCTAGCTTTTCCTGCTAGAAAATACTGATTCCTTATCAGGAACTTATCCTCTG 3330
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3331 CTATCTACTATTTTGTATAAAATATCAAGGGAACAAAAGGCTGTTTGATAAGAACAAACGTTTTCAAATTGTTT 3404
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3405 TACTTACGTTTATTTAAAAGAAAGCATTTTTCTCAATCTATTTTATTATTACAGTGAAGATGAAACATTGAGCA 3478
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3479 TAGCTAGCAAATGCTTCTTTAAAGCTTGATTTAGATATTCAGGTTCCTAACATTTGTTTTTTTGGTTTTTTTTT 3552
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3553 GAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCC 3626
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3627 CGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCAGCTA 3700
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3701 ATTTTTTGTATCTTTTAGTAGACACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGATCTCGTGA 3774
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3775 TCTGCCCACCTCGGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACTGTGCCGGGCCATCAGGTTCCTAAC 3848
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3849 ATTTGGCAAAGTAATGTGATAGTGACAGATCCCAAAAGATAAAAACATGGGCAACATGTCATACTATGCACACG 3922
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3923 GAAAACCAAAATCAAGCCAAAATAGGACACAACTTCATTCACTAGGTCCCTGAAGACCTCCAGCTTTCTGTTTG 3996
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3997 CATCCTTATCACAAAACCTAGGATAGTTACAATAAAAAAGATAACAAGTGTTGGTGAGGATATGGAGAAGCTGG 4070
Query 745 -------------- 744
Sbjct 4071 GACCCTCATACAAT 4084
