Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05391
- Subject:
- XM_011512704.3
- Aligned Length:
- 1952
- Identities:
- 1066
- Gaps:
- 862
Alignment
Query 1 ATGGAGAGACAGTCAAGGGTTATGTCAGAAAAGGATGAGTATCAGTTTCAACATCAGGGAGCGGTGGAGCTGCT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGAGACAGTCAAGGGTTATGTCAGAAAAGGATGAGTATCAGTTTCAACATCAGGGAGCGGTGGAGCTGCT 74
Query 75 TGTCTTCAATTTTTTGCTCATCCTTACCATTTTGACAATCTGGTTATTTAAAAATCATCGATTCCGCTTCTTGC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGTCTTCAATTTTTTGCTCATCCTTACCATTTTGACAATCTGGTTATTTAAAAATCATCGATTCCGCTTCTTGC 148
Query 149 ATGAAACTGGAGGAGCAATGGTGTATGGCCTTATAATGGGACTAATTTTACGATATGCTACAGCACCAACTGAT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGAAACTGGAGGAGCAATGGTGTATGGCCTTATAATGGGACTAATTTTACGATATGCTACAGCACCAACTGAT 222
Query 223 ATTGAAAGTGGAACTGTCTATGACTGTGTAAAACTAACTTTCAGTCCATCAACTCTGCTGGTTAATATCACTGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATTGAAAGTGGAACTGTCTATGACTGTGTAAAACTAACTTTCAGTCCATCAACTCTGCTGGTTAATATCACTGA 296
Query 297 CCAAGTTTATGAATATAAATACAAAAGAGAAATAAGTCAGCACAACATCAATCCTCATCAAGGAAATGCTATAC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCAAGTTTATGAATATAAATACAAAAGAGAAATAAGTCAGCACAACATCAATCCTCATCAAGGAAATGCTATAC 370
Query 371 TTGAAAAGATGACATTTGATCCAGAAATCTTCTTCAATGTTTTACTGCCACCAATTATATTTCATGCAGGATAT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTGAAAAGATGACATTTGATCCAGAAATCTTCTTCAATGTTTTACTGCCACCAATTATATTTCATGCAGGATAT 444
Query 445 AGTCTAAAGAAGAGACACTTTTTTCAAAACTTAGGATCTATTTTAACGTATGCCTTCTTGGGAACTGCCATCTC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGTCTAAAGAAGAGACACTTTTTTCAAAACTTAGGATCTATTTTAACGTATGCCTTCTTGGGAACTGCCATCTC 518
Query 519 CTGCATCGTCATAGGGTTAATTATGTATGGTTTTGTGAAGGCTATGATACATGCTGGCCAGCTGAAAAATGGAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTGCATCGTCATAGGGTTAATTATGTATGGTTTTGTGAAGGCTATGATACATGCTGGCCAGCTGAAAAATGGAG 592
Query 593 ACTTTCATTTCACTGACTGTTTATTTTTTGGTTCACTGATGTCTGCTACAGATCCAGTGACAGTGCTGGCCATT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACTTTCATTTCACTGACTGTTTATTTTTTGGTTCACTGATGTCTGCTACAGATCCAGTGACAGTGCTGGCCATT 666
Query 667 TTCCATGAACTGCACGTCGACCCTGACCTGTACACACTCTTGTTTGGAGAGAGTGTGTTGAATGATGCAGTGGC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCCATGAACTGCACGTCGACCCTGACCTGTACACACTCTTGTTTGGAGAGAGTGTGTTGAATGATGCAGTGGC 740
Query 741 CATAGTCCTTACATATTCTATATCCATTTACAGTCCCAAGGAGAATCCAAATGCATTTGATGCCGCAGCATTCT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CATAGTCCTTACATATTCTATATCCATTTACAGTCCCAAGGAGAATCCAAATGCATTTGATGCCGCAGCATTCT 814
Query 815 TCCAGTCTGTGGGGAATTTCCTGGGAATCTTCGCTGGCTCATTTGCAATGGGGTCTGCGTATGCCATCATCACA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCCAGTCTGTGGGGAATTTCCTGGGAATCTTCGCTGGCTCATTTGCAATGGGGTCTGCGTATGCCATCATCACA 888
Query 889 GCACTGTTGACCAAATTTACCAAGCTGTGTGAGTTCCCGATGCTGGAAACCGGCCTGTTTTTCCTGCTTTCTTG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCACTGTTGACCAAATTTACCAAGCTGTGTGAGTTCCCGATGCTGGAAACCGGCCTGTTTTTCCTGCTTTCTTG 962
Query 963 GAGTGCCTTCCTGTCTGCCGAGGCTGCCGGCCTAACAGGGATAGTTGCTGTTCTCTTCTGTGGAGTCACACAAG 1036
||||||||||||||||||||||||||||||||||||||..| .||||.||.|| ||.|.||.|
Sbjct 963 GAGTGCCTTCCTGTCTGCCGAGGCTGCCGGCCTAACAGCCA-------CGTTCCCTGCT------TCTCCCAGG 1023
Query 1037 CACATTATACCTACAACAATCTGTCTTCGGAT----------TCCAAAATAAGAACTAAACAGTTGTTTGAATT 1100
|| .||||| || |||| || ||.|.|.||.|||.|...||.||||.
Sbjct 1024 ----TT---------TCAATC---CT--GGATCCCTTTCTGCTC----ATTACATCTTAACGGACATTCGAATG 1075
Query 1101 TATGAACTTTTTGGCGGAGAACGTCATCTTCTGT----TACAT---GGGCCTGGCACTGTTCACGTTCCAGAAT 1167
.|.|| ||.||||||.| ||||| .|||
Sbjct 1076 CAAGA------------------TCTTCTTCTATCAACTACATTAAAGGC------------------------ 1107
Query 1168 CATATCTTTAATGCTCTTTTTATACTTGGAGCCTTTCTAGCAATTTTTGTTGCCAGAGCCTGCAACATATATCC 1241
Sbjct 1108 -------------------------------------------------------------------------- 1107
Query 1242 CCTCTCCTTCCTCCTGAATCTAGGCCGAAAACAGAAGATCCCCTGGAACTTTCAGCACATGATGATGTTTTCAG 1315
Sbjct 1108 -------------------------------------------------------------------------- 1107
Query 1316 GTTTGCGAGGAGCGATCGCATTTGCCTTAGCTATTCGGAACACAGAATCTCAGCCCAAACAAATGATGTTTACC 1389
Sbjct 1108 -------------------------------------------------------------------------- 1107
Query 1390 ACTACGCTGCTCCTCGTGTTCTTCACTGTCTGGGTATTTGGAGGAGGAACAACCCCCATGTTGACTTGGCTTCA 1463
Sbjct 1108 -------------------------------------------------------------------------- 1107
Query 1464 GATCAGAGTTGGCGTGGACCTGGATGAAAATCTGAAGGAGGACCCCTCCTCACAACACCAGGAAGCAAATAACT 1537
Sbjct 1108 -------------------------------------------------------------------------- 1107
Query 1538 TGGATAAAAACATGACGAAAGCAGAGAGTGCTCGGCTCTTCAGAATGTGGTATAGCTTTGACCACAAGTATCTG 1611
Sbjct 1108 -------------------------------------------------------------------------- 1107
Query 1612 AAACCAATTTTAACCCACTCTGGTCCTCCGCTGACTACAACATTACCTGAATGGTGTGGTCCGATTTCCAGGCT 1685
Sbjct 1108 -------------------------------------------------------------------------- 1107
Query 1686 GCTTACCAGTCCTCAAGCCTATGGGGAACAGCTAAAAGAGGATGATGTGGAATGCATTGTAAACCAGGATGAAC 1759
Sbjct 1108 -------------------------------------------------------------------------- 1107
Query 1760 TAGCCATAAATTACCAGGAGCAAGCCTCCTCACCCTGCAGTCCTCCTGCAAGGCTAGGTCTGGACCAGAAAGCT 1833
Sbjct 1108 -------------------------------------------------------------------------- 1107
Query 1834 TCACCCCAGACGCCAGGCAAGGAAAACATTTATGAGGGAGACCTCGGCCTGGGAGGCTATGAACTCAAGCTTGA 1907
Sbjct 1108 -------------------------------------------------------------------------- 1107
Query 1908 GCAAACTTTGGGTCAATCCCAGTTGAAT 1935
Sbjct 1108 ---------------------------- 1107
