Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05418
Subject:
NM_001366239.1
Aligned Length:
1674
Identities:
1572
Gaps:
102

Alignment

Query    1  ATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGA  74

Query   75  CGAGAGCTCTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGGAAGCTTATCTAACACGTGGAATGAAAAGTACA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGAGAGCTCTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGGAAGCTTATCTAACACGTGGAATGAAAAGTACA  148

Query  149  GTTCTTTACAGAAAACACCTGTTTGGAAAGGCAGGAATACAAGCTCTGCTGTGGAAATGCCTTTCAGAAATTCA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GTTCTTTACAGAAAACACCTGTTTGGAAAGGCAGGAATACAAGCTCTGCTGTGGAAATGCCTTTCAGAAATTCA  222

Query  223  AAACGAAGTCGACTTTTTTCTGATGAAGATGATAGGCAAATAAATACAAGGTCACCTAAAAGAAACCAGAGGGT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAACGAAGTCGACTTTTTTCTGATGAAGATGATAGGCAAATAAATACAAGGTCACCTAAAAGAAACCAGAGGGT  296

Query  297  TGCAATGGTTCCACAGAAATTTACAGCAACAATGTCAACACCAGATAAGAAAGCTTCACAGAAGATTGGTTTTC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGCAATGGTTCCACAGAAATTTACAGCAACAATGTCAACACCAGATAAGAAAGCTTCACAGAAGATTGGTTTTC  370

Query  371  GATTACGTAATCTGCTCAAGCTTCCTAAAGCACATAAATGGTGTATATACGAGTGGTTCTATTCAAATATAGAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GATTACGTAATCTGCTCAAGCTTCCTAAAGCACATAAATGGTGTATATACGAGTGGTTCTATTCAAATATAGAT  444

Query  445  AAACCACTTTTTGAAGGTGATAATGACTTCTGTGTATGTCTAAAGGAATCTTTTCCTAATTTGAAAACAAGAAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAACCACTTTTTGAAGGTGATAATGACTTCTGTGTATGTCTAAAGGAATCTTTTCCTAATTTGAAAACAAGAAA  518

Query  519  GTTAACAAGAGTAGAATGGGGAAAAATTCGGCGGCTTATGGGAAAACCACGGAGATGTTCTTCTGCATTTTTTG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTTAACAAGAGTAGAATGGGGAAAAATTCGGCGGCTTATGGGAAAACCACGGAGATGTTCTTCTGCATTTTTTG  592

Query  593  AGGAAGAGAGATCAGCATTAAAACAGAAACGGCAGAAAATAAGGCTCTTACAACAAAGGAAAGTTGCAGATGTT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGGAAGAGAGATCAGCATTAAAACAGAAACGGCAGAAAATAAGGCTCTTACAACAAAGGAAAGTTGCAGATGTT  666

Query  667  TCACAATTCAAAGATCTCCCAGATGAAATTCCTTTGCCTCTGGTTATTGGAACGAAAGTTACAGCACGATTACG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TCACAATTCAAAGATCTCCCAGATGAAATTCCTTTGCCTCTGGTTATTGGAACGAAAGTTACAGCACGATTACG  740

Query  741  TGGTGTTCATGATGGTTTGTTCACTGGACAAATAGATGCTGTGGATACTCTTAATGCTACTTATAGAGTAACTT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGGTGTTCATGATGGTTTGTTCACTGGACAAATAGATGCTGTGGATACTCTTAATGCTACTTATAGAGTAACTT  814

Query  815  TTGATAGGACAGGGCTTGGAACCCATACCATCCCTGACTATGAAGTTCTCAGTAATGAACCTCATGAGACAATG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTGATAGGACAGGGCTTGGAACCCATACCATCCCTGACTATGAAGTTCTCAGTAATGAACCTCATGAGACAATG  888

Query  889  CCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCTCGATTTTTTATGACCCCACCACGGTTACATTATACTCC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCTCGATTTTTTATGACCCCACCACGGTTACATTATACTCC  962

Query  963  TCCTCTCCAGTCACCAATTATAGATAATGATCCTTTATTAGGACAGTCGCCGTGGAGAAGTAAAATTTCTGGCT  1036
            ||||||||||||||||||||||                                                    
Sbjct  963  TCCTCTCCAGTCACCAATTATA----------------------------------------------------  984

Query 1037  CTGACACTGAAACATTAGGTGGTTTTCCAGTAGAATTTCTTATCCAAGTGACCAGATTATCAAAAATTCTCATG  1110
                                                              ||||||||||||||||||||||||
Sbjct  985  --------------------------------------------------ACCAGATTATCAAAAATTCTCATG  1008

Query 1111  ATTAAAAAGGAACATATCAAGAAATTAAGGGAAATGAACACAGAAGCAGAAAAATTGAAATCATATTCCATGCC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1009  ATTAAAAAGGAACATATCAAGAAATTAAGGGAAATGAACACAGAAGCAGAAAAATTGAAATCATATTCCATGCC  1082

Query 1185  CATCAGCATTGAATTTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTGAACAGCTGAACAAGGACCTAAACA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1083  CATCAGCATTGAATTTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTGAACAGCTGAACAAGGACCTAAACA  1156

Query 1259  AAGTTTTGCATAAAGTTCAACAGTATTGCTATGAGCTTGCTCCAGACCAGGGGCTCCAGCCTGCAGATCAGCCA  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157  AAGTTTTGCATAAAGTTCAACAGTATTGCTATGAGCTTGCTCCAGACCAGGGGCTCCAGCCTGCAGATCAGCCA  1230

Query 1333  ACAGATATGAGACGCAGGTGTGAGGAAGAAGCACAGGAAATTGTTCGGCATGCAAATTCCTCAACAGGACAGCC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1231  ACAGATATGAGACGCAGGTGTGAGGAAGAAGCACAGGAAATTGTTCGGCATGCAAATTCCTCAACAGGACAGCC  1304

Query 1407  CTGCGTTGAAAATGAAAATCTGACAGACTTAATTTCCAGGCTTACAGCTATTTTGTTACAAATTAAGTGTCTAG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1305  CTGCGTTGAAAATGAAAATCTGACAGACTTAATTTCCAGGCTTACAGCTATTTTGTTACAAATTAAGTGTCTAG  1378

Query 1481  CAGAAGGAGGAGACCTGAATTCCTTTGAATTCAAATCACTTACAGACTCATTAAATGATATCAAGAGTACAATA  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379  CAGAAGGAGGAGACCTGAATTCCTTTGAATTCAAATCACTTACAGACTCATTAAATGATATCAAGAGTACAATA  1452

Query 1555  GACGCTTCTAATATCAGTTGCTTTCAGAATAATGTAGAAATCCATGTTGCACATATTCAGAGTGGCCTGAGCCA  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1453  GACGCTTCTAATATCAGTTGCTTTCAGAATAATGTAGAAATCCATGTTGCACATATTCAGAGTGGCCTGAGCCA  1526

Query 1629  GATGGGAAACTTACATGCCTTTGCAGCAAATAACACCAACAGAGAC  1674
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1527  GATGGGAAACTTACATGCCTTTGCAGCAAATAACACCAACAGAGAC  1572

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