Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_05418
• Subject: XM_011544173.2
• Aligned Length: 2076
• Identities: 1167
• Gaps: 909

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCGACCCAGAACCGAGGGCTTCTTTCCCCCCGCCGGGGCCTCCCTCCCGTTCTCCACTCGGAACAAACAGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCAGTTCCCGCAGCTGCAGCGCGGGCCGCGGAACATGCGCCGGGAGCGGGGCCCGGGCGGGACTCCGGAGCTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTACTGCTCCCCCCGCGCTCCGGCGCCGGGCCTCGCCGTGCGGCCTCCTTCCTCCCTTCCTCCCGCCCGGCTCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCGGAGGCGGCGGCGGAGGGGCGAGGCGCGGCCCCCCTTCGGCGGCACCTCCTCCCCGGGCAGGCGCGGGCGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCCGGGCCCGCCTCAGCCAGCCGCGGCGGGAGCAGCGCAGCGCGGCGCCGCGGGCAGCGAGCTCCGCATTCGA  370

Query    1  --------------------------------ATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCG  42
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCG  444

Query   43  TTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGG  116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGG  518

Query  117  AAGCTTATCTAACACGTGGAATGAAAAGTACAGTTCTTTACAGAAAACACCTGTTTGGAAAGGCAGGAATACAA  190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAGCTTATCTAACACGTGGAATGAAAAGTACAGTTCTTTACAGAAAACACCTGTTTGGAAAGGCAGGAATACAA  592

Query  191  GCTCTGCTGTGGAAATGCCTTTCAGAAATTCAAAACGAAGTCGACTTTTTTCTGATGAAGATGATAGGCAAATA  264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GCTCTGCTGTGGAAATGCCTTTCAGAAATTCAAAACGAAGTCGACTTTTTTCTGATGAAGATGATAGGCAAATA  666

Query  265  AATACAAGGTCACCTAAAAGAAACCAGAGGGTTGCAATGGTTCCACAGAAATTTACAGCAACAATGTCAACACC  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AATACAAGGTCACCTAAAAGAAACCAGAGGGTTGCAATGGTTCCACAGAAATTTACAGCAACAATGTCAACACC  740

Query  339  AGATAAGAAAGCTTCACAGAAGATTGGTTTTCGATTACGTAATCTGCTCAAGCTTCCTAAAGCACATAAATGGT  412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGATAAGAAAGCTTCACAGAAGATTGGTTTTCGATTACGTAATCTGCTCAAGCTTCCTAAAGCACATAAATGGT  814

Query  413  GTATATACGAGTGGTTCTATTCAAATATAGATAAACCACTTTTTGAAGGTGATAATGACTTCTGTGTATGTCTA  486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GTATATACGAGTGGTTCTATTCAAATATAGATAAACCACTTTTTGAAGGTGATAATGACTTCTGTGTATGTCTA  888

Query  487  AAGGAATCTTTTCCTAATTTGAAAACAAGAAAGTTAACAAGAGTAGAATGGGGAAAAATTCGGCGGCTTATGGG  560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAGGAATCTTTTCCTAATTTGAAAACAAGAAAGTTAACAAGAGTAGAATGGGGAAAAATTCGGCGGCTTATGGG  962

Query  561  AAAACCACGGAGATGTTCTTCTGCATTTTTTGAGGAAGAGAGATCAGCATTAAAACAGAAACGGCAGAAAATAA  634
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AAAACCACGGAGATGTTCTTCTGCATTTTTTGAGGAAGAGAGATCAGCATTAAAACAGAAACGGCAGAAAATAA  1036

Query  635  GGCTCTTACAACAAAGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTCCCAGATGAAATTCCTTTGCCTCTG  708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGCTCTTACAACAAAGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTCCCAGATGAAATTCCTTTGCCTCTG  1110

Query  709  GTTATTGGAACGAAAGTTACAGCACGATTACGTGGTGTTCATGATGGTTTGTTCACTGGACAAATAGATGCTGT  782
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GTTATTGGAACGAAAGTTACAGCACGATTACGTGGTGTTCATGATGGTTTGTTCACTGGACAAATAGATGCTGT  1184

Query  783  GGATACTCTTAATGCTACTTATAGAGTAACTTTTGATAGGACAGGGCTTGGAACCCATACCATCCCTGACTATG  856
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GGATACTCTTAATGCTACTTATAGAGTAACTTTTGATAGGACAGGGCTTGGAACCCATACCATCCCTGACTATG  1258

Query  857  AAGTTCTCAGTAATGAACCTCATGAGACAATGCCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCTCGATTT  930
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AAGTTCTCAGTAATGAACCTCATGAGACAATGCCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCTCGATTT  1332

Query  931  TTTATGACCCCACCACGGTTACATTATACTCCTCCTCTCCAGTCACCAATTATAGATAATGATCCTTTATTAGG  1004
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TTTATGACCCCACCACGGTTACATTATACTCCTCCTCTCCAGTCACCAATTATAGATAATGATCCTTTATTAGG  1406

Query 1005  ACAGTCGCCGTGGAGAAGTAAAATTTCTGGCTCTGACACTGAAACATTAGGTGGTTTTCCAGTAGAATTTCTTA  1078
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ACAGTCGCCGTGGAGAAGTAAAATTTCTGGCTCTGACACTGAAACATTAGGTGGTTTTCCAGTAGAATTTCTTA  1480

Query 1079  TCCAAGTGACCAGATTATCAAAAATTCTCATGATTAAAAAGGAACATATCAAGAAATTAAGGGAAATGAACACA  1152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TCCAAGTGACCAGATTATCAAAAATTCTCATGATTAAAAAGGAACATATCAAGAAATTAAGGGAAATGAACACA  1554

Query 1153  GAAGCAGAAAAATTGAAATCATATTCCATGCCCATCAGCATTGAATTTCAGCGGAGATATGCAACAATTGTTCT  1226
            |||||||||||||||                                                           
Sbjct 1555  GAAGCAGAAAAATTG-----------------------------------------------------------  1569

Query 1227  GGAGCTTGAACAGCTGAACAAGGACCTAAACAAAGTTTTGCATAAAGTTCAACAGTATTGCTATGAGCTTGCTC  1300
                                                                                      
Sbjct 1570  --------------------------------------------------------------------------  1569

Query 1301  CAGACCAGGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAGCACAGGAAATT  1374
                                                                                      
Sbjct 1570  --------------------------------------------------------------------------  1569

Query 1375  GTTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCGTTGAAAATGAAAATCTGACAGACTTAATTTCCAGGCT  1448
                                                                                      
Sbjct 1570  --------------------------------------------------------------------------  1569

Query 1449  TACAGCTATTTTGTTACAAATTAAGTGTCTAGCAGAAGGAGGAGACCTGAATTCCTTTGAATTCAAATCACTTA  1522
                                                                                      
Sbjct 1570  --------------------------------------------------------------------------  1569

Query 1523  CAGACTCATTAAATGATATCAAGAGTACAATAGACGCTTCTAATATCAGTTGCTTTCAGAATAATGTAGAAATC  1596
                                                                                      
Sbjct 1570  --------------------------------------------------------------------------  1569

Query 1597  CATGTTGCACATATTCAGAGTGGCCTGAGCCAGATGGGAAACTTACATGCCTTTGCAGCAAATAACACCAACAG  1670
                                                                                      
Sbjct 1570  --------------------------------------------------------------------------  1569

Query 1671  AGAC  1674
                
Sbjct 1570  ----  1569