Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05519
Subject:
NM_001200047.2
Aligned Length:
660
Identities:
461
Gaps:
186

Alignment

Query   1  ATGTACCAGGTCATCCAGGGTATCATCTCTCCTGTCAACGACACCTATGGGAAGA----AAGACCTCGCAGCTT  70
                                                         ||  |||||    ||.||||        
Sbjct   1  ----------------------------------------------AT--GAAGAGCCGAATACCT--------  18

Query  71  CTCATCACCGAGTGG----CCATGGCCCGGCTGGC-CCTGCAGA---CAT--CCGACTGGATCCGGGTGGACCC  134
                      ||||    || |||||.|  |||| |||..| |   |||  ||.||         .||.||| 
Sbjct  19  -----------GTGGTGCTCC-TGGCCTG--TGGCTCCTTTA-ACCCCATCACCAAC---------ATGCACC-  67

Query 135  TTGGGAGAGTGAGCAGGCACAGTGGATGGAGACAGTGAAGGTGCTGAGGCATCATCACAGCAAACTGCTCAGAT  208
                    ||.|||       ||..||          ||||     |||       |||          ||||
Sbjct  68  ---------TGCGCA-------TGTTTG----------AGGT-----GGC-------CAG----------AGAT  93

Query 209  CTCC-ACCCCAGATGGAAGGCCCAGACCATGGCAAGGCACTCTTCTCGACCCCTGCAGCTGTGCCTGAGCTGAA  281
           |.|| ||.|||.|                                          |||||||||||||||||||
Sbjct  94  CACCTACACCAAA------------------------------------------CAGCTGTGCCTGAGCTGAA  125

Query 282  GCTTCTCTGTGGGGCAGACGTCTTGAAGACCTTCCAGACCCCCAACCTCTGGAAGGATGCGCACATCCAGGAAA  355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 126  GCTTCTCTGTGGGGCAGACGTCTTGAAGACCTTCCAGACCCCCAACCTCTGGAAGGATGCGCACATCCAGGAAA  199

Query 356  TAGTGGAGAAGTTTGGCTTGGTGTGCGTGGGCCGAGTAGGTCACGACCCAAAAGGTTACATCGCAGAATCTCCC  429
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 200  TAGTGGAGAAGTTTGGCTTGGTGTGCGTGGGCCGAGTAGGTCACGACCCAAAAGGTTACATCGCAGAATCTCCC  273

Query 430  ATCCTACGGATGCACCAGCACAACATTCACCTGGCCAAGGAGCCTGTGCAGAATGAGATCAGTGCCACATACAT  503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 274  ATCCTACGGATGCACCAGCACAACATTCACCTGGCCAAGGAGCCTGTGCAGAATGAGATCAGTGCCACATACAT  347

Query 504  CAGGCGAGCCTTGGGCCAAGGGCAGAGCGTAAAGTACCTGATTCCCGATGCTGTCATCACGTACATCAAGGACC  577
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 348  CAGGCGAGCCTTGGGCCAAGGGCAGAGCGTAAAGTACCTGATTCCCGATGCTGTCATCACGTACATCAAGGACC  421

Query 578  ATGGCCTCTACACCAAGGGCAGTACCTGGAAAGGCAAAAGCACCCAGAGCACTGAGGGCAAGACAAGC  645
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422  ATGGCCTCTACACCAAGGGCAGTACCTGGAAAGGCAAAAGCACCCAGAGCACTGAGGGCAAGACAAGC  489