Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05660
- Subject:
- NR_149013.2
- Aligned Length:
- 2308
- Identities:
- 619
- Gaps:
- 1681
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTCCTGCGACGCCCCTGCAGCAGCAGCAGCGTGGTCAGAGCGAGCTTCTGAGCGGTGGTTCATCTGCGTTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTAAATGGGACTGTTTCATTATTTTGATGGCTGAAGAATATTTCCTAGTGTATGTATATGAGAGTTTCTTGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCTTTATCTGTGGATGAACAGCTACTTTGAAATATATGATACATTTGTGTTAAGGCTAGTCACGCTGCTGTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATAGAAGGCCAGAATTGATCACTATCATCTGAGAGTAACTTTGTACCCATCACTGATTCCTTCCGAGACTGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCACTTCCCCAGCAGCCTCTGATTTCTTCATGTGGCTGCAGATGGCAGGATTTCCCAAAGGTTTATGGCTGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACATATTCCGTGGTGTATCTGTACAGCAGTTTCCTCATTCCTGCAGCTGTGTTTGAACAGGTCATTTACCATGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTCCTCCAGGTTCAACAGTATGGCTCCAAATGATGAAATTTCATTCTGATTTTCTGGCTGAAGACTATTCTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTGTGTATGTCCACCACAGTTACTTTATCCCTTCATCTGTGGATGGGCAGTTGGTTGGCAGAGAATTTGAACTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGATGAACTTTATTATCCAGGATGCTGAGAGTATAACATGCATGACAGAGCTTTTAGAGCACTGTGATGTAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATGTCAAGCAGAAATAGGGAGCATGTTTACAGCCATTCTATGAAAAAGTGTTCGGAATGTACAGACTAGCACAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGCTGGACTAATTGAACAAGTATTGCTGAAAATGAGTGCTGTAGATGACATGATAGCAGTGGTACATGATCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATTGTCCACATTTACAATCGATGGAGAAACAGTGAAATTCAGTGTTATGTTAATGGACAACTGGTATCTTATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGATATGGCTTGGCATGTTAACACAAATGACAGCTATGACAAGTGCTTTCTTGGATCATCAGAAACTGCTGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCAAATAGGGTATTCTGTGGTCAACTTGGTGCCGTGTATGTGTTCAGTGAAGCACTCAACCCAGCACAGATATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCAATTCATCAGTTAGGACCTAGATATAAGAGTACCTTCAAGTTTAAATCTGAGAGTGATATTCATTTGGCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AACATCATAAACAGGTTTTGTATGATGGGAAACTTGCAAGTAGCATTACCTTTACATATACTGCTAAGGCCACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GATGCTCAACTCTGCCTGGAATCATCACCAAAAGAGAATGCATCAATTTTTGTGCATTCCCAACATGCTCTAAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCTTCAGATTCAAGTGCTTTTTCCACTGTTTCCCCAATTGGATAATCGGCAGCTCAATGACAGTCAAGTGGAAA 1332
Query 1 -----------------------------------------------------ATGTT---------------T 6
||||| |
Sbjct 1333 CAACTGTCTGGGGCCTAATGTCCACCTAAGACGTGGTGTTCACCTGGGGTCTGATGTTCAGCTGAAGACTGGAT 1406
Query 7 GTC------------AGG-------CCTGAGA---GTGGAGAGCAGGGGCCAGA------------GACA---- 42
||| ||| ||.|.|| |||..||.|.||||||.|| ||||
Sbjct 1407 GTCCACCTGGAGCTGAGGAATCCACCCAGGGACTGGTGTTGAACTGGGGCCTGATGACCACCGGGGGACAAGGT 1480
Query 43 --------------------------------------CTAGCTCCTGCTTCAGGTGCAGAAATACAGCGATTT 78
|||.||||||||||||||||||||||||||||||||
Sbjct 1481 ATCCACACCAGGCTTGATGTCCACCTGTCACCAGATGTCTACCTCCTGCTTCAGGTGCAGAAATACAGCGATTT 1554
Query 79 CCAGTGCCAGCTGTTGAGCCAGTGCCAGCACCAGGGGCAGATTCCCCTCCAGGGACAGCGCTGGAGCTAGAGGA 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCAGTGCCAGCTGTTGAGCCAGTGCCAGCACCAGGGGCAGATTCCCCTCCAGGGACAGCGCTGGAGCTAGAGGA 1628
Query 153 AGCTCCAGAGCCCTCCTGCCGCTGCCCTGGGACTGCCCAGGACCAGCCCAGTGAGGAGCTGCCTGACTTCATGG 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGCTCCAGAGCCCTCCTGCCGCTGCCCTGGGACTGCCCAGGACCAGCCCAGTGAGGAGCTGCCTGACTTCATGG 1702
Query 227 CACCTCCTGTAGAGCCACCGGCCTCAGCCCTGGAGCTGAAAGTGTGGCTGGAGCTAGAGGTGGCAGAGAGGGGT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CACCTCCTGTAGAGCCACCGGCCTCAGCCCTGGAGCTGAAAGTGTGGCTGGAGCTAGAGGTGGCAGAGAGGGGT 1776
Query 301 GGCCAGCACAGCTCCAGCCAGCAGCTCCCACACTGCTCCCAGTCCTGGGCACAGTGGAAGCTATGGAGGCAGAG 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGCCAGCACAGCTCCAGCCAGCAGCTCCCACACTGCTCCCAGTCCTGGGCACAGTGGAAGCTATGGAGGCAGAG 1850
Query 375 ACCAGGGTTTGCAATCTGGGCTCCTCTGCCTCACTGGAGAGGGACTTCTCTCATTCAGCAGAGCAGCAGCCCTG 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ACCAGGGTTTGCAATCTGGGCTCCTCTGCCTCACTGGAGAGGGACTTCTCTCATTCAGCAGAGCAGCAGCCCTG 1924
Query 449 CTGCTGAAGGGCCTGCTGCTACTGCTGCTGGGGCTGTTTGCCTGCCTGCAGGAGGTGCTGGAGAGCAAGAAAAG 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CTGCTGAAGGGCCTGCTGCTACTGCTGCTGGGGCTGTTTGCCTGCCTGCAGGAGGTGCTGGAGAGCAAGAAAAG 1998
Query 523 GAGCCTGTGAGCAGGGGTTCCAGCAGGTCCTCCTGCTCCCAGAGGCGACCTCCTCCTCCAGGCATGGAGGTTTG 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAGCCTGTGAGCAGGGGTTCCAGCAGGTCCTCCTGCTCCCAGAGGCGACCTCCTCCTCCAGGCATGGAGGTTTG 2072
Query 597 CCCTCAGCTGGGCATCTGGGCCATTTGCCCC------------------------------------------- 627
|||||||||||||||||||||||||||||||
Sbjct 2073 CCCTCAGCTGGGCATCTGGGCCATTTGCCCCTAACGTGCTGCCCAGGATGGCCTCCTCTTGACAGGCGGACAGG 2146
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2147 GGGTGAGGGGGCCAGGGGGCATCTCCAAAGGAAGCTTTTAAACTCAGCAGCTGCACCCCAGAATCTGTATGCCT 2220
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2221 GCACCTGCCCAAGGATTTATTCATAGCTTACCTAAGAATTTCAAATTTCTACCATAACACTGAATAAAGTTTGA 2294
Query 628 -------------- 627
Sbjct 2295 CTTTTTGAAACTTC 2308
