Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05670
- Subject:
- NM_001301709.2
- Aligned Length:
- 1296
- Identities:
- 656
- Gaps:
- 594
Alignment
Query 1 ATGGGGCTCCTCTCAGCCCCTCCCTGCACACAGCGCATCACCTGGAAGGGGCTCCTGCTCACAGCATCACTTTT 74
|||||||.||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGGCCCCTCCCAGCCCCTTCCTGCACACAGCGCATCACCTGGAAGGGGCTCCTGCTCACAGCATCACTTTT 74
Query 75 AAACTTCTGGAACCCACCCACGACTGCCCAAGTCACGATTGAAGCCCAGCCAACCAAAGTTTCTGAGGGGAAGG 148
|||||||||||||||.|||||.||||||.|||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 75 AAACTTCTGGAACCCGCCCACCACTGCCGAAGTCACGATTGAAGCCCAGCCACCCAAAGTTTCTGAGGGGAAGG 148
Query 149 ATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTACTGGCTACATCTGGTACAAAGGGCAAATCAGGGAC 222
||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||.||||.|.||||
Sbjct 149 ATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTCCTGGCTACTTCTGGTACAAAGGGGAAATGACGGAC 222
Query 223 CTCTACCATTACATTACATCATATGTAGTAGACGGTCAAATAATTATATATGGGCCTGCATACAGTGGACGAGA 296
||||||||||||||||.|||.|||.||||.||.|||.||||||||||||||||||||||||||||||||.||||
Sbjct 223 CTCTACCATTACATTATATCGTATATAGTTGATGGTAAAATAATTATATATGGGCCTGCATACAGTGGAAGAGA 296
Query 297 AACAATATATTCCAATGCATCCCTGCTGATCCAGAATGTCACCCAGGAA-GACGCAGGATCCTACACCTTACAC 369
||||.||||||||||.|||||||||||||||||||||||||||| |||| ||.||||||.||||||||||||||
Sbjct 297 AACAGTATATTCCAACGCATCCCTGCTGATCCAGAATGTCACCC-GGAAGGATGCAGGAACCTACACCTTACAC 369
Query 370 ATCATAATGGGAGGTGATGAGAATAGAGGAGTAACTGGACATTTCACCTTCACCTTATATCTGGAGACTCCCAA 443
|||||||.|.||||||||||||.|||||.||.||.|.||||||||||||||||||||||
Sbjct 370 ATCATAAAGCGAGGTGATGAGACTAGAGAAGAAATTCGACATTTCACCTTCACCTTATA--------------- 428
Query 444 GCCCTCCATCTCCAGCAGCAAATTAAACCCCAGGGAGGCCATGGAGGCTGTGAGCTTAACCTGTGATCCTGAGA 517
Sbjct 429 -------------------------------------------------------------------------- 428
Query 518 CTCCGGACGCAAGCTACCTGTGGTGGATGAATGGTCAGAGCCTCCCTATGTCTCACAGGTTGCAGTTGTCTGAA 591
Sbjct 429 -------------------------------------------------------------------------- 428
Query 592 ACCAACAGGACCCTCTTTCTATTGGGTGTCACAAAGTACACTGCAGGACCCTATGAATGTGAAATACGGAACCC 665
Sbjct 429 -------------------------------------------------------------------------- 428
Query 666 AGTGAGTGCCAGCCGCAGTGACCCATTCACCCTGAATCTCCTCCCGAAGCTGCCCAAGCCCTACATCACCATCA 739
Sbjct 429 -------------------------------------------------------------------------- 428
Query 740 ACAACTTAAAACCCAGGGAGAATAAGGATGTCTTAAACTTCACCTGTGAACCTAAGAGTGAGAACTACACCTAC 813
Sbjct 429 -------------------------------------------------------------------------- 428
Query 814 ATTTGGTGGCTAAATGGTCAGAGCCTCCCGGTCAGTCCCAGGGTAAAGCGACCCATTGAAAACAGGATCCTCAT 887
Sbjct 429 -------------------------------------------------------------------------- 428
Query 888 TCTACCCAGTGTCACGAGAAATGAAACAGGACCCTATCAATGTGAAATAAGGGACCAATATGGTGGCATCCGCA 961
Sbjct 429 -------------------------------------------------------------------------- 428
Query 962 GTTACCCAGTCACCCTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATTTACCCTTCATTCACCTATTACCGT 1035
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 429 -------------------------CTATGGTCCAGACCTCCCCAGAATTTACCCTTCATTCACCTATTACCGT 477
Query 1036 TCAGGAGAAGTCCTCTACTTGTCCTG-TTCTGCGGACTCTAACCCACCGGCACAGTATTCTTGGACAATTAATG 1108
|||||||||..||||.|||||||||| ||| .||||.|||||||||||||||.||||||.||||||||||||||
Sbjct 478 TCAGGAGAAAACCTCGACTTGTCCTGCTTC-ACGGAATCTAACCCACCGGCAGAGTATTTTTGGACAATTAATG 550
Query 1109 GGAAGTTTCAGCTATCAGGACAAAAGCTCTTTATCCCCCAAATTACTACAAAGCATAGCGGGCTCTATGCTTGC 1182
||||||||||||.|||||||||||||||||||||||||||||||||||.|||.|||||||||||||||||||||
Sbjct 551 GGAAGTTTCAGCAATCAGGACAAAAGCTCTTTATCCCCCAAATTACTAGAAATCATAGCGGGCTCTATGCTTGC 624
Query 1183 TCTGTTCGTAACTCAGCCACTGGCAAGGAAAGCTCCAAATCCATGACAGTAAAAGTCTCTGGTAAGCGGATCCC 1256
|||||||.|||||||||||||||||||||||.||||||||||||||||||.||||||||||| ||||
Sbjct 625 TCTGTTCATAACTCAGCCACTGGCAAGGAAATCTCCAAATCCATGACAGTCAAAGTCTCTGG--------TCCC 690
Query 1257 AGTATCCTTGG--------CAATAGGGATT-------- 1278
.| ||.||| || ||.|
Sbjct 691 TG---CCATGGAGACCTGACA-----GAGTCTCAGTCA 720
