Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_05811
• Subject: XM_006715691.4
• Aligned Length: 2089
• Identities: 1171
• Gaps: 917

Alignment

Query    1  ATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAAAGGTCCT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAAAGGTCCT  74

Query   75  CCAAAAGCTGGGGAAAGCTGATGAGACAAAAGACGAACAGTTCGAAGAATATGTCCAGAACTTCAAACGGCAAG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCAAAAGCTGGGGAAAGCTGATGAGACAAAAGACGAACAGTTCGAAGAATATGTCCAGAACTTCAAACGGCAAG  148

Query  149  AAGCAGAGGGTACCAGACTTCAGCGAGAACTCCGAGGATATTTAGCAGCAATCAAAGGCATGCAGGAGGCCTCC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AAGCAGAGGGTACCAGACTTCAGCGAGAACTCCGAGGATATTTAGCAGCAATCAAAGGCATGCAGGAGGCCTCC  222

Query  223  ATGAAGCTCACAGAGTCGCTGCATGAAGTCTATGAGCCTGACTGGTATGGGCGGGAAGATGTGAAAATGGTTGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATGAAGCTCACAGAGTCGCTGCATGAAGTCTATGAGCCTGACTGGTATGGGCGGGAAGATGTGAAAATGGTTGG  296

Query  297  TGAGAAATGTGATGTGCTGTGGGAAGACTTCCATCAAAAACTCGTGGATGGGTCCTTGCTAACACTGGATACCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGAGAAATGTGATGTGCTGTGGGAAGACTTCCATCAAAAACTCGTGGATGGGTCCTTGCTAACACTGGATACCT  370

Query  371  ACCTGGGGCAATTTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGGACTATGACAGTGCC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACCTGGGGCAATTTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGGACTATGACAGTGCC  444

Query  445  CGCCACCATCTGGAAGCTCTGCAGAGCTCCAAGAGGAAGGATGAGAGTCGAATCTCTAAGGCAGAAGAAGAATT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CGCCACCATCTGGAAGCTCTGCAGAGCTCCAAGAGGAAGGATGAGAGTCGAATCTCTAAGGCAGAAGAAGAATT  518

Query  519  TCAGAAAGCACAGAAAGTGTTTGAAGAGTTTAACGTTGACTTACAAGAAGAGTTACCATCATTATGGTCAAGAC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCAGAAAGCACAGAAAGTGTTTGAAGAGTTTAACGTTGACTTACAAGAAGAGTTACCATCATTATGGTCAAGAC  592

Query  593  GAGTTGGATTTTATGTTAATACTTTCAAAAACGTCTCCAGCCTTGAAGCCAAGTTTCATAAGGAAATTGCGGTG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAGTTGGATTTTATGTTAATACTTTCAAAAACGTCTCCAGCCTTGAAGCCAAGTTTCATAAGGAAATTGCGGTG  666

Query  667  CTTTGCCACAAACTGTATGAAGTGATGACAAAACTGGGTGACCAGCACGCCGACAAGGCCTTCACCATCCAAGG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTTTGCCACAAACTGTATGAAGTGATGACAAAACTGGGTGACCAGCACGCCGACAAGGCCTTCACCATCCAAGG  740

Query  741  AGCGCCCAGTGATTCGGGTCCTCTCCGCATTGCAAAGACACCATCACCGCCTGAGGAGCCTTCACCCCTCCCGA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGCGCCCAGTGATTCGGGTCCTCTCCGCATTGCAAAGACACCATCACCGCCTGAGGAGCCTTCACCCCTCCCGA  814

Query  815  GCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCCTCGGTCACCTTCACAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCCTCGGTCACCTTCACAG  888

Query  889  ACAAGGAAAGGGCCTCCTGTCCCACCTCTACCTAAAGTCACCCCGACAAAGGAACTGCAGCAGGAGAACATCAT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ACAAGGAAAGGGCCTCCTGTCCCACCTCTACCTAAAGTCACCCCGACAAAGGAACTGCAGCAGGAGAACATCAT  962

Query  963  CAGTTTCTTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACAACACCTTCCCAGAATGAAGTCCCTGAGGTGA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CAGTTTCTTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACAACACCTTCCCAGAATGAAGTCCCTGAGGTGA  1036

Query 1037  AGAAAGAGGAGACTTTGCTGGATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACCTGCAGGTTCTGCTGGA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGAAAGAGGAGACTTTGCTGGATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACCTGCAGGTTCTGCTGGA  1110

Query 1111  GTGACCCACTCACCCATGTCTCAGACATTGCCCTGGGACCTATGGACGACAAG----CACTGATTTGGTACAGC  1180
            ||||||||||||||||||||||||||||||||||||||||||||||||| |||    |||       .||||  
Sbjct 1111  GTGACCCACTCACCCATGTCTCAGACATTGCCCTGGGACCTATGGACGA-AAGAAGACAC-------ATACA--  1174

Query 1181  CGGCTTCTGGTGGTTCATTTAATGGATTCACACAGCCCCAGGATACTTCATTATTCACAATGCAGACAGACCAG  1254
                ||                                                                    
Sbjct 1175  ----TT--------------------------------------------------------------------  1176

Query 1255  AGTATGATCTGCAACTTGGCTGAATCTGAACAGGCTCCACCCACAGAGCCAAAAGCAGAGGAGCCTCTGGCTGC  1328
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1329  TGTCACACCTGCCGTTGGTCTGGACCTTGGAATGGACACTCGGGCTGAGGAGCCAGTGGAGGAGGCAGTGATCA  1402
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1403  TACCTGGAGCTGATGCTGATGCAGCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCCCCAGGAGAGGAAGCA  1476
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1477  GAGGCGGAGACGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAACCAC  1550
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1551  TGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGAAGGTCATTCCTT  1624
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1625  CGGTGGTCATAGAGCCTGCCTCCAACCATGAAGAGGAAGGAGAAAACGAAATAACTATAGGTGCAGAGCCCAAG  1698
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1699  GAGACCACCGAGGACGCGGCTCCTCCGGGCCCCACCAGCGAGACACCGGAGCTGGCTACGGAGCAGAAGCCTAT  1772
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1773  CCAGGACCCTCAGCCCACGCCTTCTGCACCAGCCATGGGGGCTGCTGACCAGCTAGCATCTGCAAGGGAGGCCT  1846
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1847  CTCAGGAATTGCCTCCTGGCTTTCTCTACAAGGTGGAAACACTGCATGATTTTGAGGCAGCAAATTCTGATGAA  1920
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1921  CTTACCTTACAAAGGGGTGATGTGGTGCTGGTGGTCCCCTCAGATTCAGAAGCTGATCAGGATGCAGGCTGGCT  1994
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1995  GGTGGGAGTGAAGGAATCAGACTGGCTTCAGTACAGAGACCTTGCCACCTACAAAGGCCTCTTTCCAGAGAACT  2068
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 2069  TCACCCGACGCTTAGAT  2085
                             
Sbjct 1177  -----------------  1176