Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05811
- Subject:
- XM_017011995.2
- Aligned Length:
- 3801
- Identities:
- 2083
- Gaps:
- 1716
Alignment
Query 1 ATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAAAGGTCCT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAAAGGTCCT 74
Query 75 CCAAAAGCTGGGGAAAGCTGATGAGACAAAAGACGAACAGTTCGAAGAATATGTCCAGAACTTCAAACGGCAAG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCAAAAGCTGGGGAAAGCTGATGAGACAAAAGACGAACAGTTCGAAGAATATGTCCAGAACTTCAAACGGCAAG 148
Query 149 AAGCAGAGGGTACCAGACTTCAGCGAGAACTCCGAGGATATTTAGCAGCAATCAAAGGCATGCAGGAGGCCTCC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AAGCAGAGGGTACCAGACTTCAGCGAGAACTCCGAGGATATTTAGCAGCAATCAAAGGCATGCAGGAGGCCTCC 222
Query 223 ATGAAGCTCACAGAGTCGCTGCATGAAGTCTATGAGCCTGACTGGTATGGGCGGGAAGATGTGAAAATGGTTGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATGAAGCTCACAGAGTCGCTGCATGAAGTCTATGAGCCTGACTGGTATGGGCGGGAAGATGTGAAAATGGTTGG 296
Query 297 TGAGAAATGTGATGTGCTGTGGGAAGACTTCCATCAAAAACTCGTGGATGGGTCCTTGCTAACACTGGATACCT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGAGAAATGTGATGTGCTGTGGGAAGACTTCCATCAAAAACTCGTGGATGGGTCCTTGCTAACACTGGATACCT 370
Query 371 ACCTGGGGCAATTTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGGACTATGACAGTGCC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCTGGGGCAATTTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGGACTATGACAGTGCC 444
Query 445 CGCCACCATCTGGAAGCTCTGCAGAGCTCCAAGAGGAAGGATGAGAGTCGAATCTCTAAGGCAGAAGAAGAATT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGCCACCATCTGGAAGCTCTGCAGAGCTCCAAGAGGAAGGATGAGAGTCGAATCTCTAAGGCAGAAGAAGAATT 518
Query 519 TCAGAAAGCACAGAAAGTGTTTGAAGAGTTTAACGTTGACTTACAAGAAGAGTTACCATCATTATGGTCAAGAC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCAGAAAGCACAGAAAGTGTTTGAAGAGTTTAACGTTGACTTACAAGAAGAGTTACCATCATTATGGTCAAGAC 592
Query 593 GAGTTGGATTTTATGTTAATACTTTCAAAAACGTCTCCAGCCTTGAAGCCAAGTTTCATAAGGAAATTGCGGTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGTTGGATTTTATGTTAATACTTTCAAAAACGTCTCCAGCCTTGAAGCCAAGTTTCATAAGGAAATTGCGGTG 666
Query 667 CTTTGCCACAAACTGTATGAAGTGATGACAAAACTGGGTGACCAGCACGCCGACAAGGCCTTCACCATCCAAGG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTTTGCCACAAACTGTATGAAGTGATGACAAAACTGGGTGACCAGCACGCCGACAAGGCCTTCACCATCCAAGG 740
Query 741 AGCGCCCAGTGATTCGGGTCCTCTCCGCATTGCAAAGACACCATCACCGCCTGAGGAGCCTTCACCCCTCCCGA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCGCCCAGTGATTCGGGTCCTCTCCGCATTGCAAAGACACCATCACCGCCTGAGGAGCCTTCACCCCTCCCGA 814
Query 815 GCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCCTCGGTCACCTTCACAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCCTCGGTCACCTTCACAG 888
Query 889 ACAAGGAAAGGGCCTCCTGTCCCACCTCTACCTAAAGTCACCCCGACAAAGGAACTGCAGCAGGAGAACATCAT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACAAGGAAAGGGCCTCCTGTCCCACCTCTACCTAAAGTCACCCCGACAAAGGAACTGCAGCAGGAGAACATCAT 962
Query 963 CAGTTTCTTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACAACACCTTCCCAGAATGAAGTCCCTGAGGTGA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAGTTTCTTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACAACACCTTCCCAGAATGAAGTCCCTGAGGTGA 1036
Query 1037 AGAAAGAGGAGACTTTGCTGGATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACCTGCAGGTTCTGCTGGA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGAAAGAGGAGACTTTGCTGGATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACCTGCAGGTTCTGCTGGA 1110
Query 1111 GTGACCCACTCACCCATGTCTCAGACATTGCCCTGGGACCTATGGACGAC------------------------ 1160
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTGACCCACTCACCCATGTCTCAGACATTGCCCTGGGACCTATGGACGACTGACTCTTCAGAAAGTCTTTCCTT 1184
Query 1161 -------------------------------------------------------------------------- 1160
Sbjct 1185 GTGTAACCTGATCATGGAGGAAACTCCAGACAGTGGGTTGGCCGAAGAAATTCAAAGATCTCAAAATGATATAG 1258
Query 1161 -------------------------------------------------------------------------- 1160
Sbjct 1259 GTGCATTTACTTGGGGCCCTGACGCTAGTACAGACAGGGTCAGCCAAGAAGTTACCTCAGGTGGGTTTGGAGAA 1332
Query 1161 -------------------------------------------------------------------------- 1160
Sbjct 1333 GACTCTGCATGTCCCTCCGAAACAGAGCAAGACATAAGATTATCCACCAGCCTGCTTTCGTCTGCTGACTGGCC 1406
Query 1161 -------------------------------------------------------------------------- 1160
Sbjct 1407 CACTGTAGCTGAAGAGAGTGAGCATGCCCCGGGGCCAGCCTTTCCAGGTGGAAATGAACAACTGCCCCCAAAGC 1480
Query 1161 -------------------------------------------------------------------------- 1160
Sbjct 1481 CTGCGCCGGAGGCTGGAGTTGCCATTGCTGCTTGTGTGGAGATGGAGCAGCTGTATGACCCACTTGACTCAGAC 1554
Query 1161 -------------------------------------------------------------------------- 1160
Sbjct 1555 ATGCCAGCCATGGACACAGCTGGCCTGTTCAAAGAAAGTCATGAAGATATGAAGAAGTCAGATGAAGAGGAAGA 1628
Query 1161 -------------------------------------------------------------------------- 1160
Sbjct 1629 GAAACAGAAGATGGAAGATTCTCTGTGGGCAGGTGTGGAGGCGTGTCAAAAGGTAGACACTGGAGCTATTGATA 1702
Query 1161 -------------------------------------------------------------------------- 1160
Sbjct 1703 TCAAGACACTAGAAGGTACAGAGGAATTTGAAGAGAAAGCATGTGAAAGGACAGGAAACAGAGTGGTAGAACTT 1776
Query 1161 -------------------------------------------------------------------------- 1160
Sbjct 1777 CTTAATACCATAGGAAAGGAAGACCATAAGACCTTAAAAATTAATGAAGTGGAAACTAGAAAAGATCTAAGAGC 1850
Query 1161 -------------------------------------------------------------------------- 1160
Sbjct 1851 AGGGTATAAGGAAAGTACAAACGCCAATGAAAATTATTTTGAGAAAACTGACCTATTAGAAAAGGACATGGAAG 1924
Query 1161 ---------------AAGCACT---------------------------------------------------- 1167
|||.|||
Sbjct 1925 GAGGAGATATGGCAAAAGAACTTAGTGACAGAGACCAAGGTCTACATGATGGAATTCAAAAGGTAATCAATAAT 1998
Query 1168 -------------------------------------------------------------------------- 1167
Sbjct 1999 TGTGGAATGATAGAAGGCTTTGGAGCCAAACCTGCCAATCACCCAGATATCTTGAATCCATCTCTCCAGACCTA 2072
Query 1168 ----------------------------------------GATTTG---------------------------- 1173
||||||
Sbjct 2073 CTCTGTATCTAATATTGAAGATGGCAGCCCTGAGGGATGGGATTTGACTAGAAAAGACATAAAGAAAAATGCAA 2146
Query 1174 ---------------------------------------------GTACAG----------------------- 1179
||||||
Sbjct 2147 TAGACACTCCCAACCATGATATGATATTTTACCCAGCACAAGACAGTACAGATGCTGAAGAAATTCAGTGTGAG 2220
Query 1180 -------------------------------------------------------------------------- 1179
Sbjct 2221 ACTGTGTTAAATGCTCTTGTAGGTGACAGGGATAAAAATCAGGCTGTTTTATCAATAAAACTTGAAGTAGAAGC 2294
Query 1180 ---------------CC--------------------------------------------------------- 1181
||
Sbjct 2295 TCAGTCTAGGACTGACCTTAATTATTCTCTGGGAAGAGATGCAAACAGAAGAGATTTATGTTCATGTAAGGCAG 2368
Query 1182 -------------------------------------------------------------------------- 1181
Sbjct 2369 AAAGTTCACTAATAGAAGGGTCTGAAAGAACAGTAACTGAGAACCGTAGTCATACTGTTAACTTGCCAAGAATT 2442
Query 1182 -------------------------------------------------------------------------- 1181
Sbjct 2443 GCAGAGATAGACTCTTGGGGAACAGATCCAGGTCAAATCTGGCAGCCAAGCTTGGATTCAGCAATGAATAATTT 2516
Query 1182 -------------------------------------------------------------------------- 1181
Sbjct 2517 GGATATAACAGGATTCTCTGGTATACCAGATGGCCAAGCAAGTGGATTTGCCAGTTGTCTGGATTCTATTAACC 2590
Query 1182 -------------------------------------------------------------------------- 1181
Sbjct 2591 ACTGGCCTATCAGAGATACAGAAGGCTTAGATAATAGCTGGACACATTCAGATGTAGTTGAGCACAAGGAAGAA 2664
Query 1182 -------------------------------------------------------------------------- 1181
Sbjct 2665 CTGAAGGTGGACTTACTAGCAGGTGATTGTAGGGAACAAGCCATTGCTAGCTGCTGGGAACAAAGCCAGGAGAT 2738
Query 1182 -------------------------------------------------------------------------- 1181
Sbjct 2739 AGCAAGACCATTGATTTTGGGGACCTCCTGGAATGCTAGCACTGAGAGTTCTGCTAGTTCCCGAGACCAGGACA 2812
Query 1182 -------------------------------------------------------------------------- 1181
Sbjct 2813 TCAACAACTCAGATTTATCTGAAGATGAAATTGCTAACCAGAGATATGGATTGTTGTACCAAGAAATAGAGGCT 2886
Query 1182 -----------GGCTTCTGGTGGTTCATTTAATGGATTCACACAGCCCCAGGATACTTCATTATTCACAATGCA 1244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GACAAAGACGAGGCTTCTGGTGGTTCATTTAATGGATTCACACAGCCCCAGGATACTTCATTATTCACAATGCA 2960
Query 1245 GACAGACCAGAGTATGATCTGCAACTTGGCTGAATCTGAACAGGCTCCACCCACAGAGCCAAAAGCAGAGGAGC 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GACAGACCAGAGTATGATCTGCAACTTGGCTGAATCTGAACAGGCTCCACCCACAGAGCCAAAAGCAGAGGAGC 3034
Query 1319 CTCTGGCTGCTGTCACACCTGCCGTTGGTCTGGACCTTGGAATGGACACTCGGGCTGAGGAGCCAGTGGAGGAG 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CTCTGGCTGCTGTCACACCTGCCGTTGGTCTGGACCTTGGAATGGACACTCGGGCTGAGGAGCCAGTGGAGGAG 3108
Query 1393 GCAGTGATCATACCTGGAGCTGATGCTGATGCAGCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCCCCAGG 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GCAGTGATCATACCTGGAGCTGATGCTGATGCAGCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCCCCAGG 3182
Query 1467 AGAGGAAGCAGAGGCGGAGACGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAATTGGAA 1540
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 AGAGGAAGCAGAGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAATTGGAA 3256
Query 1541 CTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGAAG 1614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGAAG 3330
Query 1615 GTCATTCCTTCGGTGGTCATAGAGCCTGCCTCCAACCATGAAGAGGAAGGAGAAAACGAAATAACTATAGGTGC 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GTCATTCCTTCGGTGGTCATAGAGCCTGCCTCCAACCATGAAGAGGAAGGAGAAAACGAAATAACTATAGGTGC 3404
Query 1689 AGAGCCCAAGGAGACCACCGAGGACGCGGCTCCTCCGGGCCCCACCAGCGAGACACCGGAGCTGGCTACGGAGC 1762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 AGAGCCCAAGGAGACCACCGAGGACGCGGCTCCTCCGGGCCCCACCAGCGAGACACCGGAGCTGGCTACGGAGC 3478
Query 1763 AGAAGCCTATCCAGGACCCTCAGCCCACGCCTTCTGCACCAGCCATGGGGGCTGCTGACCAGCTAGCATCTGCA 1836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 AGAAGCCTATCCAGGACCCTCAGCCCACGCCTTCTGCACCAGCCATGGGGGCTGCTGACCAGCTAGCATCTGCA 3552
Query 1837 AGGGAGGCCTCTCAGGAATTGCCTCCTGGCTTTCTCTACAAGGTGGAAACACTGCATGATTTTGAGGCAGCAAA 1910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 AGGGAGGCCTCTCAGGAATTGCCTCCTGGCTTTCTCTACAAGGTGGAAACACTGCATGATTTTGAGGCAGCAAA 3626
Query 1911 TTCTGATGAACTTACCTTACAAAGGGGTGATGTGGTGCTGGTGGTCCCCTCAGATTCAGAAGCTGATCAGGATG 1984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 TTCTGATGAACTTACCTTACAAAGGGGTGATGTGGTGCTGGTGGTCCCCTCAGATTCAGAAGCTGATCAGGATG 3700
Query 1985 CAGGCTGGCTGGTGGGAGTGAAGGAATCAGACTGGCTTCAGTACAGAGACCTTGCCACCTACAAAGGCCTCTTT 2058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 CAGGCTGGCTGGTGGGAGTGAAGGAATCAGACTGGCTTCAGTACAGAGACCTTGCCACCTACAAAGGCCTCTTT 3774
Query 2059 CCAGAGAACTTCACCCGACGCTTAGAT 2085
|||||||||||||||||||||||||||
Sbjct 3775 CCAGAGAACTTCACCCGACGCTTAGAT 3801