Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05832
- Subject:
- NM_000383.4
- Aligned Length:
- 1647
- Identities:
- 977
- Gaps:
- 615
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGACGGACGCGGCGCTACGCCGGCTTCTGAGGCTGCACCGCACGGAGATCGCGGTGGCCGTGGACAGCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTCCCACTGCTGCACGCGCTGGCTGACCACGACGTGGTCCCCGAGGACAAGTTTCAGGAGACGCTTCATCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGAAAAGGAGGGCTGCCCCCAGGCCTTCCACGCCCTCCTGTCCTGGCTGCTGACCCAGGACTCCACAGCCATC 222
Query 1 ------ATGTGGTTGGTGTACAGTTCCGGGGC----CCCTGGAACGC---AGCAGCCTGCAAG--AAACCGGGT 59
.|.|||..|||| |.||||..||.| .||||||.||| .||.|.|||| || .|.||.||.
Sbjct 223 CTGGACTTCTGGAGGGTG--CTGTTCAAGGACTACAACCTGGAGCGCTATGGCCGGCTGC-AGCCCATCCTGGA 293
Query 60 TTTCTTCCCAATAGGGATG-------------GCCCCGG--GGGG----------------------TGTCTGT 96
...||||||.|.| |||| ||||||| |||| .|.|| |
Sbjct 294 CAGCTTCCCCAAA--GATGTGGACCTCAGCCAGCCCCGGAAGGGGAGGAAGCCCCCGGCCGTCCCCAAGGCT-T 364
Query 97 TGG-----------AGA--------CCAGATGGATGG----GGAACAGG-------TG---------------- 124
||| ||| |.||| |||.|| .|||.||| ||
Sbjct 365 TGGTACCGCCACCCAGACTCCCCACCAAGA-GGAAGGCCTCAGAAGAGGCTCGAGCTGCCGCGCCAGCAGCCCT 437
Query 125 ----------------GTCAGGGCAG------AATTTCAGG--------CCCTGGCAGCATGGGAGCAGGGCAG 168
|.|||..||| ||.|..||| |||..|.|||..|.||||||.||||
Sbjct 438 GACTCCAAGGGGCACCGCCAGCCCAGGCTCTCAACTGAAGGCCAAGCCCCCCAAGAAGCCGGAGAGCAGCGCAG 511
Query 169 AG--------------ACTGGGGA-----GTTCAGGTAC---------------CCAGAGATGCTGCTGG---- 204
|| |||.|||| .||||| || ||||||| |||| |||
Sbjct 512 AGCAGCAGCGCCTTCCACTCGGGAACGGGATTCAG--ACCATGTCAGCTTCAGTCCAGAGA-GCTG-TGGCCAT 581
Query 205 ------------------GGGAGC-----------------------------------TGTTT---------- 215
|||||| |||||
Sbjct 582 GTCCTCCGGGGACGTCCCGGGAGCCCGAGGGGCCGTGGAGGGGATCCTCATCCAGCAGGTGTTTGAGTCAGGCG 655
Query 216 -------------------------------------------------------------------TGGGAAG 222
|||||||
Sbjct 656 GCTCCAAGAAGTGCATCCAGGTTGGCGGGGAGTTCTACACTCCCAGCAAGTTCGAAGACTCCGGCAGTGGGAAG 729
Query 223 ----------------GAGGTGGC------TCTCAGG------------------AGGGTGCTGCACCCC---- 252
|..||||| .|||.|| ||||.||||| ||||
Sbjct 730 AACAAGGCCCGCAGCAGCAGTGGCCCGAAGCCTCTGGTTCGAGCCAAGGGAGCCCAGGGCGCTGC-CCCCGGTG 802
Query 253 ------AGCCCAGTCT------GCATGG--GCGT--------CTCTTG------CCTGTG-------------C 285
||.|.||.|| |||.|| |||| ||||.| ||.||| |
Sbjct 803 GAGGTGAGGCTAGGCTGGGCCAGCAGGGCAGCGTTCCCGCCCCTCTGGCCCTCCCCAGTGACCCCCAGCTCCAC 876
Query 286 CAGAAGAATGAGGACGAGTGTGCCGTGTGTCGGGACGGCGGGGAGCTCATCTGCTGTGACGGCTGCCCTCGGGC 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 877 CAGAAGAATGAGGACGAGTGTGCCGTGTGTCGGGACGGCGGGGAGCTCATCTGCTGTGACGGCTGCCCTCGGGC 950
Query 360 CTTCCACCTGGCCTGCCTGTCCCCTCCGCTCCGGGAGATCCCCAGTGGGACCTGGAGGTGCTCCAGCTGCCTGC 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 CTTCCACCTGGCCTGCCTGTCCCCTCCGCTCCGGGAGATCCCCAGTGGGACCTGGAGGTGCTCCAGCTGCCTGC 1024
Query 434 AGGCAACAGTCCAGGAGGTGCAGCCCCGGGCAGAGGAGCCCCGGCCCCAGGAGCCACCCGTGGAGACCCCGCTC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1025 AGGCAACAGTCCAGGAGGTGCAGCCCCGGGCAGAGGAGCCCCGGCCCCAGGAGCCACCCGTGGAGACCCCGCTC 1098
Query 508 CCCCCGGGGCTTAGGTCGGCGGGAGAGGAGGTAAGAGGTCCACCTGGGGAACCCCTAGCCGGCATGGACACGAC 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 CCCCCGGGGCTTAGGTCGGCGGGAGAGGAGGTAAGAGGTCCACCTGGGGAACCCCTAGCCGGCATGGACACGAC 1172
Query 582 TCTTGTCTACAAGCACCTGCCGGCTCCGCCTTCTGCAGCCCCGCTGCCAGGGCTGGACTCCTCGGCCCTGCACC 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 TCTTGTCTACAAGCACCTGCCGGCTCCGCCTTCTGCAGCCCCGCTGCCAGGGCTGGACTCCTCGGCCCTGCACC 1246
Query 656 CCCTACTGTGTGTGGGTCCTGAGGGTCAGCAGAACCTGGCTCCTGGTGCGCGTTGCGGGGTGTGCGGAGATGGT 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1247 CCCTACTGTGTGTGGGTCCTGAGGGTCAGCAGAACCTGGCTCCTGGTGCGCGTTGCGGGGTGTGCGGAGATGGT 1320
Query 730 ACGGACGTGCTGCGGTGTACTCACTGCGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCAGCCGGCACCTCCCG 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 ACGGACGTGCTGCGGTGTACTCACTGCGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCAGCCGGCACCTCCCG 1394
Query 804 GCCCGGGACGGGCCTGCGCTGCAGATCCTGCTCAGGAGACGTGACCCCAGCCCCTGTGGAGGGGGTGCTGGCCC 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1395 GCCCGGGACGGGCCTGCGCTGCAGATCCTGCTCAGGAGACGTGACCCCAGCCCCTGTGGAGGGGGTGCTGGCCC 1468
Query 878 CCAGCCCCGCCCGCCTGGCCCCTGGGCCTGCCAAGGATGACACTGCCAGTCACGAGCCCGCTCTGCACAGGGAT 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1469 CCAGCCCCGCCCGCCTGGCCCCTGGGCCTGCCAAGGATGACACTGCCAGTCACGAGCCCGCTCTGCACAGGGAT 1542
Query 952 GACCTGGAGTCCCTTCTGAGCGAGCACACCTTCGACGGCATCCTGCAGTGGGCCATCCAGAGCATGGCCCGTCC 1025
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1543 GACCTGGAGTCCCTTCTGAGCGAGCACACCTTCGATGGCATCCTGCAGTGGGCCATCCAGAGCATGGCCCGTCC 1616
Query 1026 GGCGGCCCCCTTCCCCTCC 1044
|||||||||||||||||||
Sbjct 1617 GGCGGCCCCCTTCCCCTCC 1635
