Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06095
- Subject:
- NR_104222.2
- Aligned Length:
- 2970
- Identities:
- 1012
- Gaps:
- 1956
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCCGGCCTGTGCCAGCTTGCAGAGCTCACCAGGTGCAGACCCCTGCGGCCAGGGCGAGGACGGATCTGAGCAG 74
Query 1 ------------------------------------------------------ATGCTCCAGAAGCCCAAGAG 20
||||||||||||||||||||
Sbjct 75 CTGGGCAGCAGGTGCCACCGCCTGTGGGACCCAGAGGGCTTGAGGACATCTGCAATGCTCCAGAAGCCCAAGAG 148
Query 21 CGTGAAGCTGCGGGCCCTGCGCAGCCCGAGGAAGTTCGGCGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCA 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGTGAAGCTGCGGGCCCTGCGCAGCCCGAGGAAGTTCGGCGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCA 222
Query 95 AGGGCTGTCTCCGCTTCCAGCTCCCTGAGCGCGGTTCCCGGCTGTGCCTGTACGAGGATGGCACGGAGCTGACG 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGGCTGTCTCCGCTTCCAGCTCCCTGAGCGCGGTTCCCGGCTGTGCCTGTACGAGGATGGCACGGAGCTGACG 296
Query 169 GAAGATTACTTCCCCAGTGTTCCCGACAACGCCGAGCTGGTGCTGCTCACCTTGGGCCAGGCCTGGCAGGGCT- 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAAGATTACTTCCCCAGTGTTCCCGACAACGCCGAGCTGGTGCTGCTCACCTTGGGCCAGGCCTGGCAGGGCTG 370
Query 242 ---------------------ATGTGAGCGACATCAGGCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGGG 294
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGAGTGGCAAGGACTTTGGAGATGTGAGCGACATCAGGCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGGG 444
Query 295 CTCATCCAGGCCGCCCAGCAGCTGCTGTGTGATGAGCAGGCCCCACAGAGGCAGAGGCTGCTGGCTGACCTCCT 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTCATCCAGGCCGCCCAGCAGCTGCTGTGTGATGAGCAGGCCCCACAGAGGCAGAGGCTGCTGGCTGACCTCCT 518
Query 369 GCACAACGTCAGCCAGAACATCGCGGCCGAGACCCGGGCTGAGGACCCGCCGTGGTTTGA-------------- 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCACAACGTCAGCCAGAACATCGCGGCCGAGACCCGGGCTGAGGACCCGCCGTGGTTTGAAGGCTGGAGTGCAG 592
Query 429 -------------------------------------------------------------------------- 428
Sbjct 593 TGGCGTGATCTTGGCTCACCGCAACCTCTGCCTCCCTGCACCCTCTGCCTCCCAGGTTAAAGCGATTCTCCTGC 666
Query 429 ---------------------------AGGCTTGGAGTCCCGATTTCAGAGCAAGTCTGGCTATCTGAGATACA 475
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTCAGCCTCCCGAGTAGCTGGGATTACAGGCTTGGAGTCCCGATTTCAGAGCAAGTCTGGCTATCTGAGATACA 740
Query 476 GCTGTGAGAGCCGGATCCGGAGTTACCTGAGGGAGGTGAGCTCCTACCCCTCCACAGTGGGTGCGGAGGCTCAG 549
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 741 GCTGTGAGAGCCGGATCCGGAGTTACCTGAGGGAGGTGAGCTCCTACCCCTCCACGGTGGGTGCGGAGGCTCAG 814
Query 550 GAGGAATTCCTGCGGGTCCTCGGCTCCATGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCAGCTACTTCGA 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAGGAATTCCTGCGGGTCCTCGGCTCCATGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCAGCTACTTCGA 888
Query 624 CAGAGGAGCCAAGGGCGGCAGCCGCCTCTGCACACCGGAAGGCTGGTTCTCCTGCCAGGGTCCCTTTGACATGG 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAGAGGAGCCAAGGGCGGCAGCCGCCTCTGCACACCGGAAGGCTGGTTCTCCTGCCAGGGTCCCTTTGACATGG 962
Query 698 ACAGCTGCTTATCAAGACACTCCATCAACCCCTACAGTAACAGGGAGAGCAGGATCCTCTTCAGCACCTGGAAC 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACAGCTGCTTATCAAGACACTCCATCAACCCCTACAGTAACAGGGAGAGCAGGATCCTCTTCAGCACCTGGAAC 1036
Query 772 CTGGATCACATAATAGAAAAGAAACGCACCATCATTCCTACACTGGTGGAAGCAATTAAGGAACAAGATGGAAG 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTGGATCACATAATAGAAAAGAAACGCACCATCATTCCTACACTGGTGGAAGCAATTAAGGAACAAGATGGAAG 1110
Query 846 AGAAGTGGACTGGGAGTATTTTTATGGCCTGCTTTTTACCTCAGAGAACCTAAAACTAGTGCACATTGTCTGCC 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGAAGTGGACTGGGAGTATTTTTATGGCCTGCTTTTTACCTCAGAGAACCTAAAACTAGTGCACATTGTCTGCC 1184
Query 920 ATAAGAAAACCACCCACAAGCTCAACTGTGACCCGAGCAGAATCTACAAACCCCAGACAAGGTTGAAGCGGAAG 993
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATAAGAAAACCACCCACAAGCTCAACTGTGACCCAAGCAGAATCTACAAACCCCAGACAAGGTTGAAGCGGAAG 1258
Query 994 CAGCCTGTGCGGAAACGCCAG----------------------------------------------------- 1014
|||||||||||||||||||||
Sbjct 1259 CAGCCTGTGCGGAAACGCCAGTGACACGTACACACCACGTCCTGGTCTTTGTTTGAGGCCTGACGTGGGCATCA 1332
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1333 TTTTAACAGGTGCCTTTTTTGTTTTTTTGTTTTTCGTTTTTTTGGTCACTCCAGTAGCTCCTGGAAAAAACCTT 1406
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1407 AAAAAATGTTTCCTCCAAATCTGATTTCATTACATTTCTGAATTGTTGGGGTTTTTTTTGTTGTTTTGTTTTGT 1480
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1481 TTTGTAGATGGAGTTTCACTTTTGTTGCCCAGGCTGGAGTGTAGTGGCGCGATCTCGGCTCAGCCTCCCGAGTA 1554
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1555 GCTGGGATTACAGGCATGTGCCACCACGCCCGGCTAATGTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGT 1628
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1629 TGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATGACAG 1702
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1703 GTGTGAGCCACTGCGCCCAGCCTGAATCATTTCTTATACCTTCTGACAGCCCAACTTCCAGAGGACAGCTCTGG 1776
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1777 GGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGGGCTGAGGAA 1850
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1851 TTCTTCTGTTCTCTGGTTTCACCAGCGTTGGGTTTGCTCATGTAATGTGGTCACCATACTCAAATGGTGTCATG 1924
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1925 GCTGAAGTTGGCCACCTTGCTTGAGGGACAAGTTGTTTATGTATCAGCTCTCTGCTGGGTCTCCCTTTCCATGG 1998
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1999 CAAATGGGCAGCTCCATCCTCTTGACTCTTCTAAATGCCCAAAAGAGGTGTCATGCTTTGGGGGTACGATGTTT 2072
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2073 ATACTCCGTAAAGAACATACAAGGACATTCACTGCTGATTTTTTTTTTTGTTTGTTTGAGACAGGGTCTCACTC 2146
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2147 TGTCGCTCAGGCTGGAGTGCAGTGATGCAATCTTGGCTCACTGCAACCTCCGCCTCTCAGGTTCAAGTGGTTCT 2220
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2221 CCTTCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCTACCACCAGGGCCAGCTAATTTTTGTATGTTTAGT 2294
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2295 AGAAACGGGGTTTCACCATGTTGGCCAGGCTGTTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCCTCGGTCT 2368
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2369 CCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCTGACCTGCTGAATTGTTTATAATGGCAAGAAATAGG 2442
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2443 AAACCCCCCAATGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGT 2516
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2517 GAGCGATCATTTATTTCATGATTCAACCTGATACATTTACATAGTGCAAAACTGTGTCACAGTTTCAGGCTTTT 2590
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2591 ATGAGGAAAGCGTTTCTGTGTAGAAACTGGAAGCTGTTCAGGGCATCGGCAGCTGAACCCTGCTCCGTTGGTCA 2664
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2665 GCGTTACTATCATCTCGGATCATATGGAGCTCATGTCAGCCGTGTGGGTGGCGGGTGCACAGAGACGGTCTGGA 2738
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2739 AGGAAACACGCGGATCTGAACAGCAGTAATCCTGGGGGATACGGGGGTTGGGCTAGATTACAGAGGGCTCATTT 2812
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2813 TCTACGTCATGTATTTTATGATACTTGAATTTTTTGAAATGGGCATTTATTTTATAACATGTTAAAATGTACTT 2886
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2887 TTTAAATTAAGTCATTTTGTAATATTTGAATTTTTACATTTGTTGTACAATCAGGAAAAGCAATAAAGATTTTT 2960
Query 1015 ---------- 1014
Sbjct 2961 CAAAAATAGA 2970
