Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06100
- Subject:
- NR_033814.2
- Aligned Length:
- 2813
- Identities:
- 1300
- Gaps:
- 1512
Alignment
Query 1 --------------------------------------ATGCTGTCCCGATCCCGCTGTGTGTCTCGGGCGTTC 36
||||||||||||||||||||||||||||||||||||
Sbjct 1 ATATCCGGTGTCCGCCCGCCCTCGGCTCCTCCGCCGTGATGCTGTCCCGATCCCGCTGTGTGTCTCGGGCGTTC 74
Query 37 AGCCGCTCGCTCTCCGCCTTCCAGAAGGGGAACTGCCCTCTAGGGAGACGTTCCCTGCCTGGGGTCTCCTTATG 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGCCGCTCGCTCTCCGCCTTCCAGAAGGGGAACTGCCCTCTAGGGAGACGTTCCCTGCCTGGGGTCTCCTTATG 148
Query 111 CCAGGGACCAGGTTACCCTAACAGCAGGAAGGTTGTCATTAACAACAGTGTCTTCAGTGTTCGCTTTTTCAGAA 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCAGGGACCAGGTTACCCTAACAGCAGGAAGGTTGTCATTAACAACAGTGTCTTCAGTGTTCGCTTTTTCAGAA 222
Query 185 CTACAGCTGTATGCAAGGATGACTTGGTTACAGTCAAAACCCCAGCGTTTGCAGAATCTGTCACAGAGGGAGAT 258
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTACAGCTGTATGCA--GATGACTTGGTTACAGTCAAAACCCCAGCGTTTGCAGAATCTGTCACAGAGGGAGAT 294
Query 259 GTCAGGTGGGAGAAAGCTGTTGGAGACACAGTTGCAGAAGATGAAGTGGTTTGTGAGATTGAAACTGACAAGAC 332
||||||||||||| |||||
Sbjct 295 GTCAGGTGGGAGA--------------------------------------------------------AAGAC 312
Query 333 ATCTGTGCAGGTTCCATCACCAGCAAATGGCGTGATTGAAGCTCTTTTGGTACCTGATGGGGGAAAAGTCGAAG 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 313 ATCTGTGCAGGTTCCATCACCAGCAAATGGCGTGATTGAAGCTCTTTTGGTACCTGATGGGGGAAAAGTCGAAG 386
Query 407 GAGGCACTCCACTTTTCACACTCAGGAAAACTGGTGCTGCTCCTGCTAAGGCCAAGCCGGCTGAAGCTCCTGCT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 387 GAGGCACTCCACTTTTCACACTCAGGAAAACTGGTGCTGCTCCTGCTAAGGCCAAGCCGGCTGAAGCTCCTGCT 460
Query 481 GCTGCAGCCCCAAAAGCAGAACCTACAGCAGCGGCAGTTCCTCCCCCTGCAGCACCCATACCCACTCAGATGCC 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 461 GCTGCAGCCCCAAAAGCAGAACCTACAGCAGCGGCAGTTCCTCCCCCTGCAGCACCCATACCCACTCAGATGCC 534
Query 555 ACCGGTGCCCTCGCCCTCACAACCTCCTTCTGGCAAACCTGTGTCTGCAGTAAAACCCACTGTTGCCCCACCAC 628
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 ACCGGTGCCCTCGCCCTCACAGCCTCCTTCTGGCAAACCTGTGTCTGCAGTAAAACCCACTGTTGCCCCACCAC 608
Query 629 TAGCTGAGCCAGGAGCTGGCAAAGGTCTGCGTTCAGAACATCGGGAGAAAATGAACAGGATGCGGCAGCGCATT 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 609 TAGCTGAGCCAGGAGCTGGCAAAGGTCTGCGTTCAGAACATCGGGAGAAAATGAACAGGATGCGGCAGCGCATT 682
Query 703 GCTCAGCGTCTGAAGGAGGCCCAGAATACATGTGCAATGCTGACAACTTTTAATGAGATTGACATGAGTAACAT 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 683 GCTCAGCGTCTGAAGGAGGCCCAGAATACATGTGCAATGCTGACAACTTTTAATGAGATTGACATGAGTAACAT 756
Query 777 CCAGGAGATGAGGGCTCGGCACAAAGAGGCTTTTTTGAAGAAACATAACCTCAAACTAGGCTTCATGTCGGCAT 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 757 CCAGGAGATGAGGGCTCGGCACAAAGAGGCTTTTTTGAAGAAACATAACCTCAAACTAGGCTTCATGTCGGCAT 830
Query 851 TTGTGAAGGCCTCAGCCTTTGCCTTGCAGGAACAGCCTGTTGTAAATGCAGTGATTGACGACACAACCAAAGAG 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 831 TTGTGAAGGCCTCAGCCTTTGCCTTGCAGGAACAGCCTGTTGTAAATGCAGTGATTGACGACACAACCAAAGAG 904
Query 925 GTGGTGTATAGGGATTATATTGACATCAGTGTTGCAGTGGCCACCCCACGGGGTCTGGTGGTTCCAGTCATCAG 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 905 GTGGTGTATAGGGATTATATTGACATCAGTGTTGCAGTGGCCACCCCACGGGGTCTGGTGGTTCCAGTCATCAG 978
Query 999 GAATGTGGAAGCTATGAATTTTGCAGATATTGAACGGACCATCACTGAACTGGGAGAGAAGGCCCGAAAGAATG 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 979 GAATGTGGAAGCTATGAATTTTGCAGATATTGAACGGACCATCACTGAACTGGGAGAGAAGGCCCGAAAGAATG 1052
Query 1073 AACTTGCCATTGAAGATATGGATGGCGGTACCTTCACCATTAGCAATGGAGGCGTTTTTGGCTCGCTCTTTGGA 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1053 AACTTGCCATTGAAGATATGGATGGCGGTACCTTCACCATTAGCAATGGAGGCGTTTTTGGCTCGCTCTTTGGA 1126
Query 1147 ACACCCATTATCAACCCCCCTCAGTCTGCCATCCTGGGGATGCATGGCATCTTTGACAGGCCAGTGGCTATAGG 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1127 ACACCCATTATCAACCCCCCTCAGTCTGCCATCCTGGGGATGCATGGCATCTTTGACAGGCCAGTGGCTATAGG 1200
Query 1221 AGGCAAGGTAGAGGTGCGGCCCATGATGTACGTGGCACTGACCTATGATCACCGGCTGATTGATGGCAGAGAGG 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 AGGCAAGGTAGAGGTGCGGCCCATGATGTACGTGGCACTGACCTATGATCACCGGCTGATTGATGGCAGAGAGG 1274
Query 1295 CTGTGACTTTCCTCCGCAAAATCAAGGCAGCGGTAGAGGATCCCAGAGTCCTCCTCCTGGATCTT--------- 1359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1275 CTGTGACTTTCCTCCGCAAAATCAAGGCAGCGGTAGAGGATCCCAGAGTCCTCCTCCTGGATCTTTAGGAGGAA 1348
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1349 CCCACACACCCTACAAGTTGATCATGCAGGAACTGAAAACCAGTCTTCTCCCTGTCCCCTCATGGGTCCCGGGT 1422
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1423 TAGCCTGGTGACAGGCAGACACATGCTGTTGGCCTCAAGCAAGGAAGCAGAGCACTGTGTAACCAGCAGTCACA 1496
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1497 GGTCTTTTCTTGGCGTTCCTGCCAGGCTCTCCCTCTCTGCACCTGTCTCATAGCCTCGAATATCTTAATTCCTT 1570
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1571 AGGCTTAAGAGAGAGAGCCTTAATGGATGCTCATTCATATTCCTGCCTTTCTTCCATCAGCTCTCTGCAAAGAT 1644
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1645 GATTTTGCTTTTCCCTAGTGCTGGTATACTATAGAGAAACCCCTGGGGACCATGTGATTAAGTTCCTATCTTTT 1718
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1719 GAAAGTTTGTTCTGCAGAGACTTCTAGGAGGATGCTGTGCCTCCCAAGCTCAGAGCAGCCTCTGTCCTGGCTGT 1792
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1793 GCACATTCTCCCTTGATTCCACTTGTGTGGAGGGATTGAACACAGGCAAAGAGGTGCTGCTTTGCTTCTTCAAT 1866
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1867 GGCACCTTCATTCTCCGTTGTCATTGACTTCAAGATGCCTCTTCTACCTCTTCCAGGAAGCACAGGCCAGGGGA 1940
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1941 TCTGGGTGTGTGAGTGGGAGGAGAGGGCAGAGGTCCCCTGAGGTCATGCATTGTAATCATCATAGAAGGAGAGC 2014
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2015 CCAGGCCTGCCCTCACGCTCTCCATCATAGGCTGACACCAAGAAGACTCGTCTTGGCACAATCTCACACAGCTG 2088
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2089 GGGCTGTAGCAACCCTTTCCAACCCCTTTGCTGGTTGCTGGGCCTCATTCTAGCACCTTGTTCTTAGAGCAGAT 2162
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2163 TCTAGCACATCATGGCAGTGGGACCAAGCGTGGTCCCGAGGAAGGGCCAGAGCCTGGTAGAGACTAGGGAAGGG 2236
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2237 AGGTCTCCTCTAGACTGACTCACATTGCCTTGAGCTTTTCAGTTAAGTTGCTGTAAGCACCTGGGCTGAGGAGG 2310
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2311 CAGTTTTTGTTCCTTCCTGCGTTATAGCGGGGCCTTGTCTCTTCCTCTGCAGGACACAGATCTGGAGGACGTGG 2384
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2385 ACTGGGGTAGGAAACCACCCTGAGGGTGTTAGTACCTAGTGGTGAAACGGATGAGGTCATTTCTAAGGTGTGTT 2458
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2459 GCCCGTGGATCTGGGCACAATCATTGGAATTCCTTGGAGCCACTGGGATTCATGGCTTTGTATCCAACTGCATC 2532
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2533 CAGGCCTGAGGCTGCTGACGTTTGACACCAGGGCCAGTAGAGAGTGCCCTTTTGTATCTTAAGCCAAGAAGTGA 2606
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2607 GGCCTGGGGGTGGGGGAGGGGGGAAGGGGTGGGAGCCAATACTGAGTGCCTGCAGCATCTACTACTCTGTCTTC 2680
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2681 ACTATTCAGAACTTGTAACTAAAGTATTTAAAGAAACTGATTTTAAATGCAAATTAAAGGGCAGATATTCTCAA 2754
Query 1360 - 1359
Sbjct 2755 A 2755
