Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06100
- Subject:
- NR_130749.1
- Aligned Length:
- 3027
- Identities:
- 1308
- Gaps:
- 1674
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAAGGATAAGGAGGGACTATAGTATGCTATTTAACTTTCTTTTAGTAATATGAGTTGCAAGTAAAAATTCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTATAGTATTATTATTACAACAAGACAGTCTATGCCTGTTGAAACTGGCACTTTTTCTTTCCCAAAACTAATTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TATTCTTTAAGGGGCATGCTATCTTGAAAAGGAGGGCAAATAGAGCTGCCTGTGAAAAGGAATAATATAAAACG 222
Query 1 -----------------ATGCTGTCCCGATCCCGCTGTGTGTCTCGGGCGTTCAGCCGCTCGCTCTCCGCCTTC 57
|||||||||||.||||.| ||||||.|||||||||||||.|||||||||.||||||
Sbjct 223 GAGACCCGGCCGCCGTGATGCTGTCCCGGTCCCAC--TGTGTCCCGGGCGTTCAGCCACTCGCTCTCTGCCTTC 294
Query 58 CAGAAGGGGAACTGCCCTCTAGGGAGACGTTCCCTGCCTGGGGTCTCCTTATGCCAGGGACCAGGTTACCCTAA 131
||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 CAGAAGGGGAACTGCCCTCTAGGGAGACATTCCCTGCCTGGGGTCTCCTTATGCCAGGGACCAGGTTACCCTAA 368
Query 132 CAGCAGGAAGGTTGTCATTAACAACAGTGTCTTCAGTGTTCGCTTTTTCAGAACTACAGCTGTATGCAAGGATG 205
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||.|||||||||||.|||
Sbjct 369 CAGCAGGAAGGTTGTCATTAACAACAGTGTCTTCAGTGTTCGCTTCTTCAGAACTACAACTGTATGCAAGTATG 442
Query 206 ACTTGGTTACAGTCAAAACCCCAGCGTTTGCAGAATCTGTCACAGAGGGAGATGTCAGGTGGGAGAAAGCTGTT 279
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 443 ACTTGGTTACAGTCAAAACCCCAGCGTTTGCAGAACCTGTCACAGAGGGAGATGTCAGGTGGGAGAAAGCTGTT 516
Query 280 GGAGACACAGTTGCAGAAGATGAAGTGGTTTGTGAGATTGAAACTGACAAGACATCTGTGCAGGTTCCATCACC 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||||||||||||||||
Sbjct 517 GGAGACACAGTTGCAGAAGATGAAGTGGTTTGTGAGATTGAAACTGACAAGACATTGGTGCAGGTTCCATCACC 590
Query 354 AGCAAATGGCGTGATTGAAGCTCTTTTGGTACCTGATGGGGGAAAAGTCGAAGGAGGCACTCCACTTTTCACAC 427
||||||||||.||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 591 AGCAAATGGCATGATTGAAGCTCTTTTCGTACCTGATGGGGGAAAAGTCGAAGGAGGCACTCCGCTTTTCACAC 664
Query 428 TCAGGAAAACTGGTGCTGCTCCTGCTAAGGCCAAGCCGGCTGAAGCTCCTGCTGCTGCAGCCCCAAAAGCAGAA 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 TCAGGAAAACTGGTGCTGCTCCTGCTAAGGCCAAGCCGGCTGAAGCTCCTGCTGCTGCAGCCCCAAAAGCAGAA 738
Query 502 CCTACAGCAGCGGCAGTTCCTCCCCCTGCAGCACCCATACCCACTCAGATGCCACCGGTGCCCTCGCCCTCACA 575
||||.||||||||||||||||||||.|||||||||||||||||||| |||||||||.|||||||||||||||||
Sbjct 739 CCTATAGCAGCGGCAGTTCCTCCCCATGCAGCACCCATACCCACTC-GATGCCACCAGTGCCCTCGCCCTCACA 811
Query 576 ACCTCCTTCTGGCAAACCTGTGTCTGCAGTAAAACCCACTGTTGCCCCACCACTAGCTGAGCCAGGAGCTGGCA 649
||||||||||.||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||
Sbjct 812 ACCTCCTTCTAGCAAACCTGTGTCTGCAGTAAAACCCACTGCTGTCCCACCACTAGCTGAGCCAGGAGCTGGCA 885
Query 650 AAGGTCTGCGTTCAGAACATCGGGAGAAAATGAACAGGATGCGGCAGCGCATTGCTCAGCGTCTGAAGGAGGCC 723
|||||||||.|||||||||||.|||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 886 AAGGTCTGCATTCAGAACATCAGGAGAAAATGAACAGGATGCGGCAGTGCATTGCTCAGCGTCTGAAGGAGGCC 959
Query 724 CAGAATACATGTG-CAATGCTGACAACTTTTAATGAGATTGACATGAGTAACATCCAGGAGATGAGGGCTCGGC 796
||||||||||||| ||||||||||||.|||||||||||||||..||||||||||||||.|||||||||||||||
Sbjct 960 CAGAATACATGTGCCAATGCTGACAATTTTTAATGAGATTGATGTGAGTAACATCCAGAAGATGAGGGCTCGGC 1033
Query 797 ACAAAGAGGCTTTTTTGAAGAAACATAACCTCAAACTAGGCTTCATGTCGGCATTTGTGAAGGCCTCAGCCTTT 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1034 ACAAAGAGGCTTTTTTGAAGAAACATAACCTCAAACTAGGCTTCATGTCGGCATCTGTGAAGGCCTCAGCCTTT 1107
Query 871 GCCTTGCAGGAACAGCCTGTTGTAAATGCAGTGATTGACGACACAACCAAAGAGGTGGTGTATAGGGATTATAT 944
||||||||||||||||||||||||||.|||||||||||.||.|.|||||||||||||||.||||||||||||||
Sbjct 1108 GCCTTGCAGGAACAGCCTGTTGTAAACGCAGTGATTGATGATATAACCAAAGAGGTGGTATATAGGGATTATAT 1181
Query 945 TGACATCAGTGTTGCAGTGGCCACCCCACGGGGTCTGGTGGTTCCAGTCATCAGGAATGTGGAAGCTATGAATT 1018
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 TGACATCAGTGTTGCAGTGGCCACCCCACAGGGTCTGGTGGTTCCAGTCATCAGGAATGTGGAAGCTATGAATT 1255
Query 1019 TTGCAGATATTGAACGGACCATCACTGAACTGGGAGAGAAGGCCCGAAAGAATGAACTTGCCATTGAAGATATG 1092
.||||||||||||||.||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1256 ATGCAGATATTGAACAGACCATCACTGAACTGGGAGAGAAGGCCCGAAAGAATGAATTTGCCATTGAAGATATG 1329
Query 1093 GATGGCGGTACCTTCACCATTAGCAATGGAGGCGTTTTTGGCTCGCTCTTTGGAACACCCATTATCAACCCCCC 1166
|||||.||||||||||||||||||||||||||.|||||||||||.|||||| ||||||||||||||||||||||
Sbjct 1330 GATGGTGGTACCTTCACCATTAGCAATGGAGGTGTTTTTGGCTCACTCTTT-GAACACCCATTATCAACCCCCC 1402
Query 1167 TCAGTCTGCCATCCTGGGGATGCATGGCATCTTTGACAGGCCAGTGGCTATAGGAGGCAAGGTAGAGGTGCGGC 1240
| |||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||
Sbjct 1403 T--GTCTGCCATCCTGGGGATGCATGGCATCTTTGACAAGCCAGTGGCTATAGGAGGCAAGGTAGAGGTGCAGC 1474
Query 1241 CCATGATGTACGTGGCACTGACCTATGATCACCGGCTGATTGATGGCAGAGAGGCTGTGACTTTCCTCCGCAAA 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1475 CCATGATGTACGTGGCACTGACCTATGATCACCGGCTGATTGATGGCAGAGAGGCTGTGACTTTCCTCCGCAAA 1548
Query 1315 ATCAAGGCAGCGGTAGAGGATCCCAGAGTCCTCCTCCTGGATCTT----------------------------- 1359
||||||||||||||||||||||||||||||||||||.|.||||||
Sbjct 1549 ATCAAGGCAGCGGTAGAGGATCCCAGAGTCCTCCTCTTTGATCTTTAGGAGGAACCCACACACCCTACAAATTG 1622
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1623 ATCATGCAGGAACTGAAAACCAGTCTTCTCCCTGTCCCCTCATGGGTCCCAGGTTAGCCTGGTGACAGGCACAT 1696
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1697 GCTGTTGGCCTCAAGCAAGGAAGCAGAGCACTATGTAACCAGCAGTCACAGCTTTTTTCTTGGTGTTCCTGCCT 1770
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1771 GGCTCTCTCCCTCTCTGCACCTGTCTCATACCCTCGAATATCTTAATTCCTTAGGCTTGAGAGAGAGAGCCTTA 1844
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1845 ATGGATGCTCATTCATATTCCTGCCTTTCTTCCATCAGCTCTCTGCAAAGATGATTTTGCTTCTCCCTAGTGCT 1918
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1919 GGTATACTATAGAGAAACCCCCGAGGACCATGTGATTAAGTTCCTATCTTTTGAAAGTTTGTTCTGCAGAGACA 1992
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1993 TCTAGGAGGATGCTGTGCCTCCCAAGCTCAGAGCAGCCTCTGTCCTGGCTGTGCACATTCTCGATTCCACTTGT 2066
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2067 ATGGAGGGATTGAACACAGGCAAAGAGGTGCTGCTTTCCTTCTTCAATGGCACCTTCATTCTCCATTGTCATTG 2140
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2141 ACTTCAAGATGCCTCTTCTACCTCTACCAGGAAGCACAGGCCAGGGGATCTGGGTGTGTGAATGGGAGGAGAGA 2214
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2215 GCAGAGGTTCCCTGAGGTCACGTGTTGTAATCATCATAGAAGGAGAGCCCAGGTCTGCCCTCACGCTCTCCATC 2288
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2289 ATAGGCTCACACCAAGAAGACTCATCTTGGCACAATCTCACACAGCTGGGGCTGTAGCAACCCTTTCCTGGTTG 2362
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2363 CTGGGCCTCATTCTAGCACCTTGTTCTTACTTAGAGCAGATTCTAGCACATCATGGCAGTGGAACCAAGCGTAG 2436
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2437 TCCCGAAGAAGGGCCAGAGCCTGGTAGAGATTAGGGAAGGGAGGTCTCCTCTAGACTCAGATTGCCTTGAGCTT 2510
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2511 TTCAAGTAAGTTGCTGTAAGCCCGTGGGCTGAGGAGGCAGTTCTTGTTCCTTCCTGCGTTATAGTGGGGCCTTG 2584
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2585 TCTCTTCCTCTGCAGGACACAGATTTGGAGGACGTGGACTGGGGTAGGAAACCACCCTGAGGGTGTTAGTAGAT 2658
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2659 AGTGGTGTAATGGATGAGGTCATTTCTAAGATGTGTTGCCGGTGGATCTGGGCACAATCATTGGAATTCCTTGG 2732
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2733 AGCTACTGGGATTCATGGCTTTGTATCCAACTGCATCCAGGCCTGAGGCTGCTGACATTTGACACTAGGGCCAG 2806
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2807 TAGAGAGTGCCTTTTTGTATCTTGAGCCAAGAAGTGAGGCCTGGGGGTGGGGAGGGGGGAAGGGGTGGGAGCCA 2880
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2881 ATACTGAGTGCCTGCAGCATCTACTACTCTGTCTTCACTATTCAGAACTTGTAACTAAAGTATTTAAAGAAACT 2954
Query 1360 ------------------------------------------------------------------- 1359
Sbjct 2955 GATTTTAAATGCAAATTAAAGGGCAGATGTTCTCAAAAAAATAAATAAATAAAATGGAAAAAAAAAA 3021
