Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06153
- Subject:
- NR_073111.2
- Aligned Length:
- 2608
- Identities:
- 1136
- Gaps:
- 1471
Alignment
Query 1 ------------------------------------------------------------ATGGAGCAGCTGAA 14
|||||||||||||.
Sbjct 1 CCTGACCTCGCACCCAGCTCGGAGCCCGGAGCGTGCCTCGGCGGCCTGTCGGTTTTCACCATGGAGCAGCTGAG 74
Query 15 CTCAGCAAACACCCGCTTCGCCTTGGACCTGTTCCTGGCGTTGAGTGAGAACAATCCGGCTGGAAACATCTTCA 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCAGCAAACACCCGCTTCGCCTTGGACCTGTTCCTGGCGTTGAGTGAGAACAATCCGGCTGGAAACATCTTCA 148
Query 89 TCTCTCCCTTCAGCATTTCATCTGCTATGGCCATGGTTTTTCTGGGGACCAGAGGTAACACGGCAGCACAGCTG 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTCTCCCTTCAGCATTTCATCTGCTATGGCCATGGTTTTTCTGGGGACCAGAGGTAACACGGCAGCACAGCTG 222
Query 163 TCCAA--------------------------------------------------------------------- 167
|||||
Sbjct 223 TCCAAGGGTTATATCAGTTCCTAGCTTGAGGTTTTCCAGGGACTTTAAAACCTCAGCAAAGAATAGTTTTAAGG 296
Query 168 ---------------------------------------------------------------GACTTTCCATT 178
|||||||||||
Sbjct 297 ACTCCTCCCCCATTTCCATTAAAGCAGATGGAGCATAGGCACAGTGCAAACATTCCATATCTCGACTTTCCATT 370
Query 179 TCAACACGGTTGAAGAGGTTCATTCAAGATTCCAGAGTCTGAATGCTGATATCAACAAACGTGGAGCGTCTTAT 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCAACACGGTTGAAGAGGTTCATTCAAGATTCCAGAGTCTGAATGCTGATATCAACAAACGTGGAGCGTCTTAT 444
Query 253 ATTCTGAAACTTGCTAATAGATTATATGGAGAGAAAACTTACAATTTCCTTCCTGAGTTCTTGGTTTCGACTCA 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATTCTGAAACTTGCTAATAGATTATATGGAGAGAAAACTTACAATTTCCTTCCTGAGTTCTTGGTTTCGACTCA 518
Query 327 GAAAACATATGGTGCTGACCTGGCCAGTGTGGATTTTCAGCATGCCTCTGAAGATGCAAGGAAGACCATAAACC 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAAAACATATGGTGCTGACCTGGCCAGTGTGGATTTTCAGCATGCCTCTGAAGATGCAAGGAAGACCATAAACC 592
Query 401 AGTGGGTCAAAGGACAGACAGAAGGAAAAATTCCGGAACTGTTGGCTTCGGGCATGGTTGATAACATGACCAAA 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGTGGGTCAAAGGACAGACAGAAGGAAAAATTCCGGAACTGTTGGCTTCGGGCATGGTTGATAACATGACCAAA 666
Query 475 CTTGTGCTAGTAAATGCCATCTATTTCAAGGGAAACTGGAAGGATAAATTCATGAAAGAAGCCACGACGAATGC 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTTGTGCTAGTAAATGCCATCTATTTCAAGGGAAACTGGAAGGATAAATTCATGAAAGAAGCCACGACGAATGC 740
Query 549 ACCATTCAGATTGAATAAGAAAGACAGAAAAACTGTGAAAATGATGTATCAGAAGAAAAAATTTGCATATGGCT 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCATTCAGATTGAATAAGAAAGACAGAAAAACTGTGAAAATGATGTATCAGAAGAAAAAATTTGCATATGGCT 814
Query 623 ACATCGAGGACCTTAAGTGCCGTGTGCTGGAACTGCCTTACCAAGGCGAGGAGCTCAGCATGGTCATCCTGCTG 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACATCGAGGACCTTAAGTGCCGTGTGCTGGAACTGCCTTACCAAGGCGAGGAGCTCAGCATGGTCATCCTGCTG 888
Query 697 CCGGATGACATTGAGGACGAGTCCACGGGCCTGAAGAAGATTGAGGAACAGTTGACTTTGGAAAAGTTGCATGA 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCGGATGACATTGAGGACGAGTCCACGGGCCTGAAGAAGATTGAGGAACAGTTGACTTTGGAAAAGTTGCATGA 962
Query 771 GTGGACTAAACCTGAGAATCTCGATTTCATTGAAGTTAATGTCAGCTTGCCCAGGTTCAAACTGGAAGAGAGTT 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTGGACTAAACCTGAGAATCTCGATTTCATTGAAGTTAATGTCAGCTTGCCCAGGTTCAAACTGGAAGAGAGTT 1036
Query 845 ACACTCTCAACTCCGACCTCGCCCGCCTAGGTGTGCAGGATCTCTTTAACAGTAGCAAGGCTGATCTGTCTGGC 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACACTCTCAACTCCGACCTCGCCCGCCTAGGTGTGCAGGATCTCTTTAACAGTAGCAAGGCTGATCTGTCTGGC 1110
Query 919 ATGTCAGGAGCCAGAGATATTTTTATATCAAAAATTGTCCACAAGTCATTTGTGGAAGTGAATGAAGAGGGAAC 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATGTCAGGAGCCAGAGATATTTTTATATCAAAAATTGTCCACAAGTCATTTGTGGAAGTGAATGAAGAGGGAAC 1184
Query 993 AGAGGCGGCAGCTGCCACAGCAGGCATCGCAACTTTCTGCATGTTGATGCCCGAAGAAAATTTCACTGCCGACC 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGAGGCGGCAGCTGCCACAGCAGGCATCGCAACTTTCTGCATGTTGATGCCCGAAGAAAATTTCACTGCCGACC 1258
Query 1067 ATCCATTCCTTTTCTTTATTCGGCATAATTCCTCAGGTAGCATCCTATTCTTGGGGAGATTTTCTTCCCCT--- 1137
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATCCATTCCTTTTCTTTATTCGGCATAATTCCTCAGGTAGCATCCTATTCTTGGGGAGATTTTCTTCCCCTTAG 1332
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1333 AAGAAAGAGACTGTAGCAATACAAAAATCAAGCTTAGTGCTTTATTACCTGAGTTTTTAATAGAGCCAATATGT 1406
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1407 CTTATATCTTTACCAATAAAACCACTGTTCAGAAACAAGTCTTTCATTTTCTTTGTAAGTTTGGCTCTGTTGGC 1480
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1481 TGTTTACACCCATGAATTTTGGCATGGGTATCTATTTTTCTTTTTTACATTGAAAAAAATCCAGTGGTTGCTTT 1554
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1555 TGAATGCATCAAGTAAAGAAGAAGAAAAGAATACATCCGATGCGTAGATTCTTGACCATGTAGTAATCTATAAA 1628
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1629 ATTGCTATATCCTCCTGATAGCCATGGGAAAACATGATAAGATGGTCATTTATTTTGCAGTTAGAATTTTGGAA 1702
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1703 GCCACAAAATAGACAGACACCCTGACTGTTGAAGGGAGGTTTAAAAACAGATATTCAATTGAAATGTAAGAGAG 1776
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1777 CACCCCAATTGAGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTTCTGCAGGAT 1850
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1851 TAGTATTCTGTTACAGACCTCTAGTTTTTAGACTCTTCAATTAAAGGGCCAATGGTTATAACCTGCATTCCCTT 1924
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1925 TTTTGTTCTTCTTTATGTATAATATATAGTTCATGTGGCGCTGCATGAAATCAAGAAGTGGGTGTCTTAGGATA 1998
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1999 AAAGATACCAAGAGTCTACAAAAATAACCATGTAGTAAGATAAACTGCTGAACAAAGGTTTTACTGTTAGCCAC 2072
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2073 CTTCTCATGTGTTTTCTTTTCTCTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTGAGACAGAGTCTT 2146
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2147 GCTCTGTTACCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACCGCAACCTCTGCCTCCTGGGTTCAAGTGA 2220
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2221 TTCTCTTGCTTCAGCCTCCTGAGTAGCTGGGATTATAGGCATGCACCACTAGGCCTGGCTAATTTTTGTATTTT 2294
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2295 TAGTAGAGATGGGGTTTTTCCATGTTGGCCAGGCTGGTCCCGAACTCCTGACCTCAGGTGATCCGCGCACCTCA 2368
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2369 GCCTCCCAAAGTGCTGGGATTACAGGCATGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTC 2442
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2443 TTGACTTCCAAGGCTGTGTGGGGAGATGGGGTGGGGGCTCTTGGACTGATATAAAACTTTGTCAAATGTAGTTC 2516
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2517 TTTGAATGGAGCTTGAAACGCCGCATATTCTTGCTCCCACAAGGATAGTGGGCATCATGAATTAATAAAACGTC 2590
Query 1138 ------------------ 1137
Sbjct 2591 CTAGGATTCTGCAAGCTA 2608
