Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06352
- Subject:
- NM_001331048.1
- Aligned Length:
- 1675
- Identities:
- 721
- Gaps:
- 845
Alignment
Query 1 ATGCCGGTGCAGCTGACGACAGCCCTGCGTGTGGTGGGCACCAGCCTGTTTGCCCTGGCAGTGCTGGGTGGCAT 74
|||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||.|||||||||.|||||
Sbjct 1 ATGCCGGTGCAGCTGACTACAGCCCTGCGTGTGGTGGGCACCAGTCTGTTTGCCCTGGTAGTGCTGGGAGGCAT 74
Query 75 CCTGGCAGCCTATGTGACGGGCTACCAGTTCATCCACACGGAAAAGCACTACCTGTCCTTCGGCCTGTACGGCG 148
||||||.|||||||||||.|||||||||||.||||||||.||||||||||||||||||||.|||||.|||||.|
Sbjct 75 CCTGGCGGCCTATGTGACAGGCTACCAGTTTATCCACACAGAAAAGCACTACCTGTCCTTTGGCCTCTACGGTG 148
Query 149 CCATCCTGGGCCTGCACCTGCTCATTCAGAGCCTTTTTGCCTTCCTGGAGCACCGGCGCATGCGACGTGCCGGC 222
||||||||||.||.||.||||||||.||||||||.||||||||||||||||||||.||.|||| ||.||.
Sbjct 149 CCATCCTGGGTCTACATCTGCTCATCCAGAGCCTGTTTGCCTTCCTGGAGCACCGTCGAATGC-----GCAGGG 217
Query 223 CAGG-----CCCTGAAGCTGC---CCTCCCCGCGGCGGGGCTCGGTGGCACTGTGCATTGCCGCGTACCAGGAG 288
|||| ||||.||||||| .|||||.|.|||.|.|.||.||||||||.||||||||.||.|||||.|||
Sbjct 218 CAGGGCGCCCCCTCAAGCTGCACTGCTCCCAGAGGCCGCGTTCAGTGGCACTCTGCATTGCTGCCTACCAAGAG 291
Query 289 GACCCTGACTACTTGCGCAAGTGCCTGCGCTCGGCCCAGCGCATCTCCTTCCCTGACCTCAAGGTGGTCATGGT 362
|||||.||.|||.|||||||||||||.|||||.||.||||||||..||||.||..|||||||||||||||||||
Sbjct 292 GACCCCGAATACCTGCGCAAGTGCCTTCGCTCAGCTCAGCGCATTGCCTTTCCAAACCTCAAGGTGGTCATGGT 365
Query 363 GGTGGATGGCAACCGCCAGGAGGACGCCTACATGCTGGACATCTTCCACGAGGTGCTGGGCGGCACCGAGCAGG 436
.|||||||||||.||||||||.||..||||||||.|||||||||||||.|||||||||||.|||||.|||||.|
Sbjct 366 AGTGGATGGCAATCGCCAGGAAGATACCTACATGTTGGACATCTTCCATGAGGTGCTGGGTGGCACTGAGCAAG 439
Query 437 CCGGCTTCTTTGTGTGGCGCAGCAACTTCCATGAGGCAGGCGAGGGTGAGACGGAGGCCAGCCTGCAGGAGGGC 510
|.|||||||||||||||||.|||||.|||||||||||.||.||.||.|||||.|||||||||||||||||.|||
Sbjct 440 CTGGCTTCTTTGTGTGGCGTAGCAATTTCCATGAGGCGGGTGAAGGAGAGACAGAGGCCAGCCTGCAGGAAGGC 513
Query 511 ATGGACCGTGTGCGGGATGTGGTGCGGGCCAGCACCTTCTCGTGCATCATGCAGAAGTGGGGAGGCAAGCGCGA 584
|||||.||||||||.|.|||||||.||||||||||||||||.||||||||||||||||||||.||||||||.||
Sbjct 514 ATGGAGCGTGTGCGAGCTGTGGTGTGGGCCAGCACCTTCTCATGCATCATGCAGAAGTGGGGGGGCAAGCGTGA 587
Query 585 GGTCATGTACACGGCCTTCAAGGCCCTCGGCGATTCGGTGGACTACATCCAGGTGTGCGACTCTGACACTGTGC 658
||||||||||||.||||||||||||||.|||.|.||.||||||||||||||||||||.||||||||||||||||
Sbjct 588 GGTCATGTACACTGCCTTCAAGGCCCTTGGCAACTCAGTGGACTACATCCAGGTGTGTGACTCTGACACTGTGC 661
Query 659 TGGATCCAGCCTGCACCATCGAGATGCTTCGAGTCCTGGAGGAGGATCCCCAAGTAGGGGGAGTCGGGGGAGAT 732
||||.||||||||||||||.|||||||||||||||.||||.||.||||||||||||||.||.||.||.||||||
Sbjct 662 TGGACCCAGCCTGCACCATTGAGATGCTTCGAGTCTTGGAAGAAGATCCCCAAGTAGGAGGTGTTGGAGGAGAT 735
Query 733 GTCC-AGCCCCCAGGGAAAGGTATG---------------------GCA-------GTAGAGGATG-------A 770
|||| |..||.|| |.|.||||| ||| |||..||||| |
Sbjct 736 GTCCAAATCCTCA---ACAAGTATGATTCATGGATCTCCTTCCTGAGCAGTGTGAGGTACTGGATGGCTTTCAA 806
Query 771 CCAGGTCCAAGCTGCCCAGGTCAGAGCTAC-----------GGAA-------------------GCATGGTCCG 814
|..|| |||.|.|| .|.|||..|||| |.|| |||||..|||
Sbjct 807 CGTGG----AGCGGGCC-TGCCAGTCCTACTTTGGCTGTGTGCAATGTATTAGTGGGCCTTTGGGCATGTACCG 875
Query 815 -----------TTCACCAACGCC--------------------ACGTTTCTAG------AGAGCAG-------- 843
||||.||...|| |.|||.|||| ||.||||
Sbjct 876 CAACAGCCTCCTTCAGCAGTTCCTGGAGGATTGGTACCATCAGAAGTTCCTAGGCAGCAAGTGCAGCTTTGGGG 949
Query 844 -------------------------------------------------------------------------- 843
Sbjct 950 ATGATCGGCACCTTACCAACCGAGTCCTGAGTCTTGGCTACCGGACTAAGTATACAGCACGCTCTAAGTGCCTC 1023
Query 844 -------------------------------------------------------------------------- 843
Sbjct 1024 ACAGAGACCCCCACTAGGTACCTTCGATGGCTCAATCAGCAAACCCGCTGGAGCAAGTCTTACTTTCGGGAATG 1097
Query 844 -------------------------------------------------------------------------- 843
Sbjct 1098 GCTCTACAATTCTCTGTGGTTCCATAAGCACCACCTCTGGATGACCTATGAATCAGTGGTCACAGGTTTCTTCC 1171
Query 844 -------------------------------------------------------------------------- 843
Sbjct 1172 CATTCTTCCTCATTGCTACAGTCATACAACTTTTCTACCGTGGCCGCATCTGGAACATTCTCCTCTTCCTGCTA 1245
Query 844 -------------------------------------------------------------------------- 843
Sbjct 1246 ACAGTGCAGCTGGTGGGCATTATCAAGGCTACCTATGCCTGCTTCCTTCGAGGCAATGCAGAGATGATCTTCAT 1319
Query 844 -------------------------------------------------------------------------- 843
Sbjct 1320 GTCCCTCTACTCCCTTCTCTATATGTCCAGCCTCTTGCCAGCCAAGATCTTTGCTATTGCTACCATCAACAAGT 1393
Query 844 -------------------------------------------------------------------------- 843
Sbjct 1394 CTGGCTGGGGCACTTCTGGCAGGAAAACCATTGTCGTGAACTTCATTGGCCTAATCCCCGTGTCCATCTGGGTG 1467
Query 844 -------------------------------------------------------------------------- 843
Sbjct 1468 GCAGTTCTTCTAGGGGGGTTAGCCTACACAGCTTATTGCCAGGACCTGTTCAGTGAGACCGAGCTAGCCTTCCT 1541
Query 844 -------------------------------------------------------------------------- 843
Sbjct 1542 AGTCTCTGGGGCCATCCTGTATGGCTGCTACTGGGTGGCCCTCCTCATGCTGTATCTGGCCATTATTGCCCGGA 1615
Query 844 ----------------------------------------------- 843
Sbjct 1616 GGTGTGGGAAGAAGCCAGAACAGTATAGCCTGGCTTTTGCGGAGGTG 1662
