Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_06376
Subject:
XM_017010818.1
Aligned Length:
1068
Identities:
648
Gaps:
339

Alignment

Query    1  ATGGTAG--ATG-------GAACCCTCCTTTTACTCCTCTCGGAGGCCCTGGCCCTTACCCAGACCTGGGCGGG  65
            |||||.|  |||       ||||||||.|..|.||.|||||||.|||||||.||||.|||.|||||||||||||
Sbjct    1  ATGGTGGTCATGGCGCCCCGAACCCTCTTCCTGCTGCTCTCGGGGGCCCTGACCCTGACCGAGACCTGGGCGGG  74

Query   66  CTCCCACTCCTTGAAGTATTTCCACACTTCCGTGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCTCTGTGG  139
            ||||||||||.|||.|||||||..|.|..||||||||||||||||||||||||||||||||||||||.|..|||
Sbjct   75  CTCCCACTCCATGAGGTATTTCAGCGCCGCCGTGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCGCCATGG  148

Query  140  GCTACGTGGACGACACCCAGTTCGTGCGCTTCGACAACGACGCCGCGAGTCCGAGGATGGTGCCGCGGGCGCCG  213
            ||||||||||||||||.|||||||||||.|||||||.||||.|.|||.||||||||||||.|||||||||||||
Sbjct  149  GCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACTCGGCGTGTCCGAGGATGGAGCCGCGGGCGCCG  222

Query  214  TGGATGGAGCAGGAGGGGTCAGAGTATTGGGACCGGGAGACACGGAGCGCCAGGGACACCGCACAGATTTTCCG  287
            |||.||||||||||||||.|.|||||||||||...|||||||||||.|.|||.||.|..||||||||.|..|.|
Sbjct  223  TGGGTGGAGCAGGAGGGGCCGGAGTATTGGGAAGAGGAGACACGGAACACCAAGGCCCACGCACAGACTGACAG  296

Query  288  AGTGAACCTGCGGACGCTGCGCGGCTACTACAATCAGAGCGAGGCCGGGTCTCACACCCTGCAGTGGATGCATG  361
            |.|||||||||.|||.|||||||||||||||||.||||||||||||                            
Sbjct  297  AATGAACCTGCAGACCCTGCGCGGCTACTACAACCAGAGCGAGGCC----------------------------  342

Query  362  GCTGCGAGCTGGGGCCCGACAGGCGCTTCCTCCGCGGGTATGAACAGTTCGCCTACGACGGCAAGGATTATCTC  435
                                                      |||                             
Sbjct  343  ------------------------------------------AAC-----------------------------  345

Query  436  ACCCTGAATGAGGACCTGCGCTCCTGGACCGCGGTGGACACGGCGGCTCAGATCTCCGAGCAAAAGTCAAATGA  509
                                                                                      
Sbjct  346  --------------------------------------------------------------------------  345

Query  510  TGCCTCTGAGGCGGAGCACCAGAGAGCCTACCTGGAAGACACATGCGTGGAGTGGCTCCACAAATACCTGGAGA  583
                                                                                      
Sbjct  346  --------------------------------------------------------------------------  345

Query  584  AGGGGAAGGAGACGCTGCTTCACCTGGAGCCCCCAAAGACACACGTGACTCACCACCCCATCTCTGACCATGAG  657
                                         |||||.||||||||||||||.||||||||..|||.||||.|||||
Sbjct  346  -----------------------------CCCCCCAAGACACACGTGACCCACCACCCTGTCTTTGACTATGAG  390

Query  658  GCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCAGGATGGGGAGGG  731
            ||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.
Sbjct  391  GCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCATACTGACCTGGCAGCGGGATGGGGAGGA  464

Query  732  CCATACCCAGGACACGGAGCTCGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCAGCTGTGG  805
            |||.|||||||||..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  465  CCAGACCCAGGACGTGGAGCTCGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCAGCTGTGG  538

Query  806  TGGTGCCTTCTGGAGAGGAGCAGAGATACACGTGCCATGTGCAGCATGAGGGGCTACCCGAGCCCGTCACCCTG  879
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||||||.|||..|||
Sbjct  539  TGGTGCCTTCTGGAGAGGAGCAGAGATACACGTGCCATGTGCAGCATGAGGGGCTGCCGGAGCCCCTCATGCTG  612

Query  880  AGATGGAAGCCGGCTTCCCAGCCCACCATCCCCATCGTGGGCATCATTGCTGGCCTGGTTCTCCTTGGATCTGT  953
            ||||||||||.|.||||||.||||||||||||||||.||||.|||.||||||||||||||.||||||.|.||||
Sbjct  613  AGATGGAAGCAGTCTTCCCTGCCCACCATCCCCATCATGGGTATCGTTGCTGGCCTGGTTGTCCTTGCAGCTGT  686

Query  954  GGTCTCTGGAGCTGTGGTTGCTGCTGTGATATGGAGGAAGAAGAGCTCAGGTGGAAAAGGAGGGAGCTACTCTA  1027
            .|||.|||||||||.|||.|||||||||.|.|||||.|||||||||||||.|                      
Sbjct  687  AGTCACTGGAGCTGCGGTCGCTGCTGTGCTGTGGAGAAAGAAGAGCTCAGAT----------------------  738

Query 1028  AGGCTGAGTGGAGCGACAGTGCCCAGGGGTCT  1059
                                            
Sbjct  739  --------------------------------  738