Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_06378
• Subject: NM_002117.6
• Aligned Length: 1112
• Identities: 909
• Gaps: 88

Alignment

Query    1  ---------ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGCCCTGACCGATACTTGGGCAGG  65
                     ||||||||||||..||||||||||||||||||.||.|.|||||||||||||||.||.|||||..|
Sbjct    1  ATGCGGGTCATGGCGCCCCGAGCCCTCCTCCTGCTGCTCTCGGGAGGCCTGGCCCTGACCGAGACCTGGGCCTG  74

Query   66  CTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGGAGCCCCGCTACATCGCCGTGG  139
            ||||||||||.|||||||||||..||||||.|||||.||||||||||||||.||||||||||.||||.|.||||
Sbjct   75  CTCCCACTCCATGAGGTATTTCGACACCGCCGTGTCCCGGCCCGGCCGCGGAGAGCCCCGCTTCATCTCAGTGG  148

Query  140  AGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCCGAGGATGGAGCCGCGGGAGCCG  213
            ..|||||.|||||||||||.|||.||||||||||||||||||||||||.||||||...|||||||||||.||||
Sbjct  149  GCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCGCGAGTCCGAGAGGGGAGCCGCGGGCGCCG  222

Query  214  TGGGTGGAGCAAGAGGGGCCGCAGTATTGGGA---GTGGACCACAG-GGTACGCCAAG-GCCAACGCACAGACT  282
            |||||||||||.|||||||||.||||||||||   |..|| ||||| .|||   |||| ||| |.||||||.||
Sbjct  223  TGGGTGGAGCAGGAGGGGCCGGAGTATTGGGACCGGGAGA-CACAGAAGTA---CAAGCGCC-AGGCACAGGCT  291

Query  283  GACCGAGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGAAT  356
            |||||||||..||||.|||||||||.|.||..|||||||||||||||||..||||||||||||||||||.|.||
Sbjct  292  GACCGAGTGAGCCTGCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGACGGGTCTCACACCCTCCAGAGGAT  365

Query  357  GAATGGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGACGGCAAGGATT  430
            |..||||||||||.|||||||||||||.||||||||||||||||||.|||||..|||.||||||||||||||||
Sbjct  366  GTCTGGCTGCGACCTGGGGCCCGACGGGCGCCTCCTCCGCGGGTATGACCAGTCCGCCTACGACGGCAAGGATT  439

Query  431  ACATCTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGATCACCCAGCGCTTCTAT  504
            |||||.|||||||||||||||||||||||||||||||.||||||||||.|||||||||||||||||||...|..
Sbjct  440  ACATCGCCCTGAACGAGGACCTGCGCTCCTGGACCGCCGCGGACACCGCGGCTCAGATCACCCAGCGCAAGTTG  513

Query  505  GAGGCAGAGGAATATGCAGAGGAGTTCAG--GA---CCTACCTGGAGGGCGAGTGCCTGGAGTTGCTCCGCAGA  573
            |||||   ||....|||.|.||||  |||  ||   ||||||||||||||..||||.||||||.||||||||||
Sbjct  514  GAGGC---GGCCCGTGCGGCGGAG--CAGCTGAGAGCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCGCAGA  582

Query  574  TACTTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCACCACCCCATCTC  647
            |||.|||||||.||||||||||||||.|||||||||||.||.||||||.|||||||..|||||||||||.||||
Sbjct  583  TACCTGGAGAACGGGAAGGAGACGCTGCAGCGCGCAGAACCCCCAAAGACACACGTGACCCACCACCCCCTCTC  656

Query  648  TGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGACCTGGCAGCGGG  721
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  657  TGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCGGG  730

Query  722  ATGGGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGG  795
            ||||||||||.||||||||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||||
Sbjct  731  ATGGGGAGGACCAGACCCAGGACACCGAGCTTGTGGAGACCAGGCCAGCAGGAGATGGAACCTTCCAGAAGTGG  804

Query  796  GCCGCTGTGGTGGTGCCTTCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGGCTGCCCCAGCC  869
            ||.|||||||||||||||||||||.|.||.|||||||||||.||||||.||||||||||||||||||...||||
Sbjct  805  GCAGCTGTGGTGGTGCCTTCTGGACAAGAGCAGAGATACACGTGCCATATGCAGCACGAGGGGCTGCAAGAGCC  878

Query  870  CCTCATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTTGTTGTCC  943
            |||||.||||||.|||||||..|||.||||||||||||||||||||.|||||||||||||||||||.|.|||||
Sbjct  879  CCTCACCCTGAGCTGGGAGCCATCTTCCCAGCCCACCATCCCCATCATGGGCATCGTTGCTGGCCTGGCTGTCC  952

Query  944  TTGG-------AGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATAGAAA  1010
             |||       ||||   |||..|||||||||||||.|.|||.|||||||.||||.|||||||||||.|.||||
Sbjct  953  -TGGTTGTCCTAGCT---GTCCTTGGAGCTGTGGTCACCGCTATGATGTGTAGGAGGAAGAGCTCAGGTGGAAA  1022

Query 1011  CAGAGGGAGCTACTCTCAGGCTG----------CAGTG------------------------------------  1038
            ..|||||||||.|||||||||||          |||||                                    
Sbjct 1023  AGGAGGGAGCTGCTCTCAGGCTGCGTGCAGCAACAGTGCCCAGGGCTCTGATGAGTCTCTCATCACTTGTAAAG  1096

Query 1039  --  1038
              
Sbjct 1097  CC  1098