Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06378
- Subject:
- XR_001743373.1
- Aligned Length:
- 3235
- Identities:
- 1036
- Gaps:
- 2197
Alignment
Query 1 ------------------------------ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGC 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATATTTTTCCCAGACGCGGAGGTTGGGGTCATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGC 74
Query 45 CCTGACCGATACTTGGGCAGGCTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGG 118
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCTGACCGATACTTGGGCGGGCTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGG 148
Query 119 AGCCCCGCTACATCGCCGTGGAGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCCG 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGCCCCGCTACATCGCCGTGGAGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCCG 222
Query 193 AGGATGGAGCCGCGGGAGCCGTGGGTGGAGCAAGAGGGGCCGCAGTATTGGGAGTGGACCACAGGGTACGCCAA 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGATGGAGCCGCGGGAGCCGTGGGTGGAGCAAGAGGGGCCGCAGTATTGGGAGTGGACCACAGGGTACGCCAA 296
Query 267 GGCCAACGCACAGACTGACCGAGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTC 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGCCAACGCACAGACTGACCGAGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTC 370
Query 341 ACACCCTCCAGGGAATGAATGGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCG 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACACCCTCCAGGGAATGAATGGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCG 444
Query 415 TACGACGGCAAGGATTACATCTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGAT 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TACGACGGCAAGGATTACATCTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGAT 518
Query 489 CACCCAGCGCTTCTATGAGGCAGAGGAATATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGT 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACCCAGCGCTTCTATGAGGCAGAGGAATATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGT 592
Query 563 TGCTCCGCAGATACTTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCAC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGCTCCGCAGATACTTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCAC 666
Query 637 CACCCCATCTCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGAC 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACCCCATCTCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGAC 740
Query 711 CTGGCAGCGGGATGGGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCT 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTGGCAGCGGGATGGGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCT 814
Query 785 TCCAGAAGTGGGCCGCTGTGGTGGTGCCTTCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGG 858
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCCAGAAGTGGGCCGCTGTGGTGGTGCCTCCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGG 888
Query 859 CTGCCCCAGCCCCTCATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGG 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGCCCCAGCCCCTCATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGG 962
Query 933 CCTTGTTGTCCTTGGAGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATA 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTTGTTGTCCTTGGAGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATA 1036
Query 1007 GAAACAGAGGGAGCTACTCTCAGGCTG---------CAGTG--------------------------------- 1038
||||||||||||||||||||||||||| |||||
Sbjct 1037 GAAACAGAGGGAGCTACTCTCAGGCTGCAGCCTACTCAGTGGTCAGCGGAAACTTGATGATAACATGGTGGTCA 1110
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1111 AGCTTATTTCTCCTGGGGGTGCTCTTCCAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCG 1184
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1185 GAAGGAAAGTTGACTCATACTGGTGTCCAGTGAAGAAACCCAGGCGCATAAGAGGGACAGTTGGATCTCAGGGA 1258
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1259 GGACTGTCTTCTTCTCACCTCCCCGGACGATGCTTCTTGACACAGGAAAGAGGATGTGCTGCTAGGGTCATCAT 1332
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1333 GTCCTGGTTTATTGTGTTGTCAGTAGAATGAAATCAAAATACATACTTCATAAATAATAAAATAACCCATAATA 1406
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1407 AGTAAACATTTACAATTTACTCACACCATTGAGGTTTCCTCCAGGTGTGAGCACAGCTGCAGACACACCTTGTC 1480
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1481 GCTTCAGTCAGGACACAGGACAGAGTAAAATGGGAAGAAACCACAGTCACTGCAGAAAGGGCCCCCATGGAAGA 1554
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1555 GGCCTGGCAGGGAGGCCAGCTGCCCCAGGGCCACCATATTTAGAGATGACTTCCCCTTTCTAGGCAGGACTGGG 1628
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1629 ATTTTAAAATTCTTTTTGTATTCATAGTTGTTCTGAAATTGCAGGATGATGAGACCCAGCACTGGTGAGTTATA 1702
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1703 CTGTCTCTTTCTTCCCTATTAAATTCTGTGCCAAACAGCACCTTCATATATTTATCTCCTCTTCCTGGAGAGAA 1776
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1777 TAAAAACAATGGAAAAATTGAACCATACAAACATACTTTAAATATGTGCTGTCAGAAGTAGCTACTAAAGGATT 1850
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1851 AATTCCACCAAAGTGAGGGAAGGTTTGAAAAGAAAAACATTGTATACCCATATTCAAAGCAGCATTATTCACGA 1924
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1925 TAGCCAAGACAACACACACCAACACATGAATGAAGAAAATGTGGTATATATCGACAACGGAATATCATTCAGCC 1998
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1999 TTAAGAAGGAAACCTGGTCACAGGCTGCAACAGGGATAAACCTGAAGGACACTGCTAAGTAAAATAAGCCAATC 2072
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2073 ACAAAGAAAACCCAATACTGCACATTTCCATTTATATGAGGTGTCTAAACTGAAAGTAGACTAATGGCTGCTAG 2146
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2147 GGGCTCGGTGAGGGGGATGGATGAATGTTTGTTCAATGGGCATAGAGTTTCAGTGTTGCAAGATGAAAAGTTCT 2220
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2221 AGAGATCTGTTGCACAACTATGTATTTACAGTTAATACTGTACTACTGTATACTTTAAAATAGTTAAGATACCA 2294
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2295 AATTTTACATAATGTAGTTTTTGGCCCAAGGAAAAGACTAATTAGCCCTGTTACTAATTTAGGGAAAAAGTACA 2368
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2369 TGAATTCATTAAAAATATATTAGTATGCGCTTACCTTAGATACAGAAAACTATGAGACAAAAAGAGAGATCCCT 2442
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2443 GCTACCCCAGCTATCACCCATGAACCAGGAAAATCAGCACCTCCTGAAACTAGACAGAAAGGCTCACAGGCCCA 2516
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2517 GCCTTGACATGTTGAATCAGTCTGCATTTTGGCTGGAACCCAGGTGGCTCCACTGCATGTAAAGCACCTTCCCA 2590
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2591 GATAGTGATGGAGGGAGATCCTAGGACAGTGACTCTGCTCCACGGGGAGAAGCCTCCAGTCCAGATGGGAGCAG 2664
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2665 CCAGAAGGGCCCAGGAGGGACATTTCCAAGAAGATAAAATTAACAGAATGTCCAAAGTGTCCAACGTCTTGAAA 2738
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2739 GAATCATACAAACAAAAGAGATATCAAACTTAAATTAATGAGAGTTAATAAAATAAACAAAAACAAATGCAAGT 2812
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2813 ATTAACTCCAAGAAGAACCAATGTTGTACAGGCAGTGAAAAGTAGTCCAGTTGACATATGAGAGGATTAGTCAT 2886
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2887 GGTAAAAGAAACAAGAGATGGCTGAACTAAACATAATCACTATATAAATATACTGGGAAGAGTGAAAGAGAACA 2960
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2961 AGTACTCTTAACTGTTGCATCCACCATTGCGCTGTGCAACAATGGGTGCATCTGAAAAAAATCAAGCAATAATA 3034
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3035 ATAAAGAAATGGTAGTTAGAGATACAGAAGTAAAGTCAAAAGAATCAGCTAAAAAACTTGAAAGTGGTTGGCCC 3108
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3109 CTAGAAAGGCAGAAATTGAGAAGAGGCAGAGAGGACTCTCATTTTTCTCAAGAGATTCTGCACAAATATTTGAC 3182
Query 1039 ----------------------------------------------------- 1038
Sbjct 3183 TCTTTCAATTGTGCACAATTATAAATTTGATTAAAATAAAAACAAAAGCTTCA 3235
