Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06379
- Subject:
- NM_001098479.2
- Aligned Length:
- 1344
- Identities:
- 875
- Gaps:
- 348
Alignment
Query 1 ATGGTGGTCATGGCACCCCGAACCCTCTTCCTGCTACTCTCGGGGGCCCTGACCCTGACCGAGACCTGGGCGGG 74
|||||.|||||||.||||.|||||||.|||||.|||||||||.||||||||||.||.||||||||
Sbjct 1 ---------ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGCCCTGACCGATACTTGGGCGGG 65
Query 75 CTCCCACTCCATGAGGTATTTCAGCGCCGCCGTGTCCCGGCCCAGCCGCGGGGAGCCCCGCTTCATCGCCATGG 148
||||||||||.||||||||||||||.||||.|||||.||||||.||||||||||||||||||.|||||||.|||
Sbjct 66 CTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGGAGCCCCGCTACATCGCCGTGG 139
Query 149 GCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACTCGGCGTGTCCGAGGATGGAGCCGCGGGCGCCG 222
..|||||.|||||||||||.|||.|||||||||||||||||.|.|||..||||||||||||||||||||.||||
Sbjct 140 AGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCCGAGGATGGAGCCGCGGGAGCCG 213
Query 223 TGGGTGGAGCGGGAGGGGCCAGAGTATTGGGAAGAGGA-GACACGGAACACCAAGGCCCACGCACAGACTGACA 295
||||||||||..||||||||..||||||||| ||.||| .|||.||.||.||||||||.||||||||||||||.
Sbjct 214 TGGGTGGAGCAAGAGGGGCCGCAGTATTGGG-AGTGGACCACAGGGTACGCCAAGGCCAACGCACAGACTGACC 286
Query 296 GAATGAACCTGCAGACCCTGCGCGGCTACTACAACCAGAGCGAGGCCAGTTCTCATACCCTCCAGTGGATGATT 369
||.||..||||..||.|||||.|.||..||||||||||||||||||..|.|||||.|||||||||.|.||||.|
Sbjct 287 GAGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGAATGAAT 360
Query 370 GGCTGCGACCTGGGGTCCGACGGACGCCTCCTCCGCGGGTATGAACAGTATGCCTACGATGGCAAGGATTACCT 443
|||||||||.|||||.||||||||||||||||||||||||||.|.|||.|.||.|||||.||||||||||||.|
Sbjct 361 GGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGACGGCAAGGATTACAT 434
Query 444 CGCCCTGAACGAGGACCTGCGCTCCTGGACCGCAGCGGACACTGCGGCTCAGATCTCCAAGCGCAAGTGTGAGG 517
|.|||||||||||||||||||||||||||||||.||||||||.|.||||||||||.||.|||||...|.|||||
Sbjct 435 CTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGATCACCCAGCGCTTCTATGAGG 508
Query 518 C---GGCCAATGTGGCTGAACAAAGGAG---AG--CCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCACAGAT 583
| || |||.|| ||.||||| || ||||||||||||||..||||.||||||.|||||.|||||
Sbjct 509 CAGAGG--AATATG------CAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGTTGCTCCGCAGAT 574
Query 584 ACCTGGAGAACGGGAAGGAGATGCTGCAGCGCGCGGACCCCCCCAAGACACACGTGACCCACCACCCTGTCTTT 657
||.|||||||.||||||||||.|||.||||||||.||.||.||.|||.|||||||..||||||||||..|||.|
Sbjct 575 ACTTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCACCACCCCATCTCT 648
Query 658 GACTATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCATACTGACCTGGCAGCGGGA 731
|||.|||||||||||||||||||||||||||||||||||||||||||||||||||..|||||||||||||||||
Sbjct 649 GACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGACCTGGCAGCGGGA 722
Query 732 TGGGGAGGACCAGACCCAGGACGTGGAGCTCGTGGAGACCAAGCCTGCAGGGGATGGAACCTTCCAGAAGTGGG 805
|||||||||.||||||||||||...|||||.||||||||||.||||||||||||||||||||||||||||||||
Sbjct 723 TGGGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGG 796
Query 806 CAGCTGTGGTGGTGCCTTCTGGAGAGGAGCAGAGATACACGTGCCATGTGCAGCATGAGGGGCTGCCGGAGCCC 879
|.|||||||||||||||.||||||||||.|||||||||||.||||||||||||||.|||||||||||..|||||
Sbjct 797 CCGCTGTGGTGGTGCCTCCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGGCTGCCCCAGCCC 870
Query 880 CTCATGCTGAGATGGAAGCAGTCTTCCCTGCCCACCATCCCCATCATGGGTATCGTTGCTGGTCTGGTTGTCCT 953
|||||.|||||||||.||||||||.|||.||||||||||||||||.||||.|||||||||||.||.||||||||
Sbjct 871 CTCATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTTGTTGTCCT 944
Query 954 TGCAGCTGTAGTCACTGGAGCTGCGGTCGCTGCTGTGCTGTGGAGGAAGAAGAGCTCAGAT------------- 1014
||.||||||.|||||||||||||.|||||||||||||.|||||||||||||||||||||||
Sbjct 945 TGGAGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATAGAAACAGAGGGA 1018
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1019 GCTACTCTCAGGCTGCAGCCTACTCAGTGGTCAGCGGAAACTTGATGATAACATGGTGGTCAAGCTTATTTCTC 1092
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1093 CTGGGGGTGCTCTTCCAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCGGAAGGTGGGTGA 1166
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1167 CATGTGGATCTTGTTTTTTTTGTGGCTGTGGACATCTTTCAACACTGCCTTCTTGGCCTTGCAAAGCCTTCGCT 1240
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1241 TTGGCTTCGGCTTTAGGAGGGGCAGGAGCTTCCTTCTTCGTTCTTGGCACCATCTTATGAAAAGGGTCCAGATT 1314
Query 1015 ------------ 1014
Sbjct 1315 AAGATTTTTGAC 1326