Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06380
- Subject:
- XM_011529540.2
- Aligned Length:
- 2621
- Identities:
- 1462
- Gaps:
- 1156
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTCATCACGCTGTGCTACCTGTACCTGTGGGCGCGCTGGGGTCGCCGGCCGGCTGAGCTCGTGCGCGCCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTGCGGCGGCTGCGTGCCTCGCGCTGTTCCTTCACCTTCTGCGGCGCGGCCGCGCAGCCCCCGGGCGCCCGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGCCTGAGCCGTGGCGGCCGCGTCTTCTGCGTCAGCGACAGCCAGTCCATTGAAGACTTGAACAAGTGGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTATTTCTTGTGTCTCCTTTTATACTTGAAGCAGAACACATAGCATTTGTGACGGAGAGCATTTGGGTACAAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAGAATTTACAGAGATCATCCTCTTCAGAAACAATTGTCAAGTGGTCAGACTGTTGTTTGCCATTAGCTTGCA 370
Query 1 -----------------------------------------------------------------------ATG 3
|||
Sbjct 371 GACCTGGGGATCCTTATCGGCTAATTGCTGAAGCAAGTGTGGACAACTTCAGCAAGCTGGGGGTGGCGTTCATG 444
Query 4 GAAGATAGACTCCACATGGATAATGGACTGGTACCCCAAAAGATTGTGTCGGTGCACTTGCAGGACTCCACTCT 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAAGATAGACTCCACATGGATAATGGACTGGTACCCCAAAAGATTGTGTCGGTGCACTTGCAGGACTCCACTCT 518
Query 78 GAAGGAAGTTAAGGATCAGGTCTCAAACAAGCAAGCCCAGATCCTAGAGCCGAAGCCTGAACCTTCTCTTGAGA 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAAGGAAGTTAAGGATCAGGTCTCAAACAAGCAAGCCCAGATCCTAGAGCCGAAGCCTGAACCTTCTCTTGAGA 592
Query 152 TTAAGCCTGAGCAGGACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAAGAACCCAAACAA 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTAAGCCTGAGCAGGACGGTATGGAGCATGTTGGCAGAGATGACCCAAAGGCTCTTGGTGAAGAACCCAAACAA 666
Query 226 AGGAGAGGCAGTGCCTCTGGGAGTGAGCCTGCTGGGGACAGTGACAGGGGAGGGGGCCCCGTTGAGCATTATCA 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGGAGAGGCAGTGCCTCTGGGAGTGAGCCTGCTGGGGACAGTGACAGGGGAGGGGGCCCCGTTGAGCATTATCA 740
Query 300 CCTCCATCTGTCTAGTTGCCACGAGTGTCTGGAACTTGAGAACAGCACCATTGAGTCAGTCAAGTTTGCGTCTG 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTCCATCTGTCTAGTTGCCACGAGTGTCTGGAACTTGAGAACAGCACCATTGAGTCAGTCAAGTTTGCGTCTG 814
Query 374 CCGAGAACATTCCAGACCTTCCCTACGATTATAGCAGCAGTTTGGAGAGTGTTGCTGATGAGACCTCCCCCGAA 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCGAGAACATTCCAGACCTTCCCTACGATTATAGCAGCAGTTTGGAGAGTGTTGCTGATGAGACCTCCCCCGAA 888
Query 448 AGAGAAGGGAGGAGAGTCAACCTCACGGGAAAGGCACCCAACATCCTCCTCTATGTGGGCTCCGACTCCCAGGA 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGAGAAGGGAGGAGAGTCAACCTCACGGGAAAGGCACCCAACATCCTCCTCTATGTGGGCTCCGACTCCCAGGA 962
Query 522 AGCCCTCGGCCGGTTCCACGAGGTCCGGTCTGTGCTGGCCGACTGTGTGGACATTGACAGTTATATTCTCTACC 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGCCCTCGGCCGGTTCCACGAGGTCCGGTCTGTGCTGGCCGACTGTGTGGACATTGACAGTTATATTCTCTACC 1036
Query 596 ACCTGCTGGAGGACAGTGCTCTCAGAGACCCGTGGACGGACAACTGTCTGCTGTTGGTCATTGCTACCAGGGAG 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCTGCTGGAGGACAGTGCTCTCAGAGACCCGTGGACGGACAACTGTCTGCTGTTGGTCATTGCTACCAGGGAG 1110
Query 670 TCCATTCCCGAAGACCTGTACCAGAAGTTCATGGCCTATCTTTCTCAGGGAGGGAAGGTGTTGGGCCTGTCTTC 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCCATTCCCGAAGACCTGTACCAGAAGTTCATGGCCTATCTTTCTCAGGGAGGGAAGGTGTTGGGCCTGTCTTC 1184
Query 744 ATCCTTCACCTTTGGTGGCTTTCAGGTGACAAGCAAGGGTGCACTGCACAAGACAGTCCAGAACTTGGTTTTCT 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATCCTTCACCTTTGGTGGCTTTCAGGTGACAAGCAAGGGTGCACTGCACAAGACAGTCCAGAACTTGGTTTTCT 1258
Query 818 CCAAGGCTGACCAGAGTGAGGTGAAGCTCAGCGTCTTGAGCAGTGGCTGCAGGTACCAGGAAGGCCCCGTCCGG 891
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCAAGGCTGACCAGAGCGAGGTGAAGCTCAGCGTCTTGAGCAGTGGCTGCAGGTACCAGGAAGGCCCCGTCCGG 1332
Query 892 CTCAGCCCCGGCAGGCTCCAGGGCCACCTGGAGAATGAGGACAAGGACAGGATGATTGTGCATGTGCCTTTTGG 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTCAGCCCCGGCAGGCTCCAGGGCCACCTGGAGAATGAGGACAAGGACAGGATGATTGTGCATGTGCCTTTTGG 1406
Query 966 AACTCGCGGGGGAGAAGCTGTTCTTTGCCAGGTGCACTTAGAACTACCTCCCAGCTCCAACATAGTGCAAACTC 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AACTCGCGGGGGAGAAGCTGTTCTTTGCCAGGTGCACTTAGAACTACCTCCCAGCTCCAACATAGTGCAAACTC 1480
Query 1040 CAGAAGATTTTAACTTGCTCAAGTCAAGCAATTTTAGAAGATACGAAGTCCTTAGAGAGATTCTGACAACCCTT 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CAGAAGATTTTAACTTGCTCAAGTCAAGCAATTTTAGAAGATACGAAGTCCTTAGAGAGATTCTGACAACCCTT 1554
Query 1114 GGCCTCAGCTGTGACATGAAACAAGTTCCTGCCTTAACTCCTCTTTACTTGCTGTCAGCTGCGGAGGAAATCAG 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGCCTCAGCTGTGACATGAAACAAGTTCCTGCCTTAACTCCTCTTTACTTGCTGTCAGCTGCGGAGGAAATCAG 1628
Query 1188 GGATCCTCTTATGCAGTGGCTTGGGAAACATGTGGACTCCGAGGGAGAAATAAAATCCGGCCAGCTCTCTCTTA 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGATCCTCTTATGCAGTGGCTTGGGAAACATGTGGACTCCGAGGGAGAAATAAAATCCGGCCAGCTCTCTCTTA 1702
Query 1262 GATTTGTTTCATCCTACGTGTCTGAAGTAGAAATAACCCCATCTTGTATACCTGTGGTGACCAACATGGAGGCC 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GATTTGTTTCATCCTACGTGTCTGAAGTAGAAATAACCCCATCTTGTATACCTGTGGTGACCAACATGGAGGCC 1776
Query 1336 TTCTCATCAGAACATTTCAACTTAGAGATCTATCGCCAAAATCTGCAGACCAAGCAGTTGGGGAAAGTAATTTT 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TTCTCATCAGAACATTTCAACTTAGAGATCTATCGCCAAAATCTGCAGACCAAGCAGTTGGGGAAAGTAATTTT 1850
Query 1410 GTTTGCCGAAGTGACCCCCACAACGATGCGTCTCCTGGATGGG--CTGATGTTTCAGACACCGCAGGAAATGGG 1481
||||||||||||||||||||||||||||||||||||||||||| |.||||| ||| ||.
Sbjct 1851 GTTTGCCGAAGTGACCCCCACAACGATGCGTCTCCTGGATGGGGCCGGATGT-------ACC--------TGT- 1908
Query 1482 CTTAATAGTGATCGCGGCCCGGCAGACCGAGGGCAAAGGACGGGGAGGGAATGTGTGGCTGAGCCCTGTGGGAT 1555
Sbjct 1909 -------------------------------------------------------------------------- 1908
Query 1556 GTGCTCTTTCTACTCTGCTCATCTCCATTCCACTGAGATCCCAGCTGGGACAGAGGATCCCGTTTGTCCAGCAT 1629
Sbjct 1909 -------------------------------------------------------------------------- 1908
Query 1630 CTGATGTCCGTGGCTGTCGTGGAAGCAGTGAGGTCCATTCCCGAGTATCAGGATATCAACTTACGAGTGAAGTG 1703
Sbjct 1909 -------------------------------------------------------------------------- 1908
Query 1704 GCCCAACGATATTTATTACAGTGACCTCATGAAGATCGGCGGAGTTCTGGTTAACTCAACACTCATGGGAGAAA 1777
Sbjct 1909 -------------------------------------------------------------------------- 1908
Query 1778 CATTTTATATACTTATTGGCTGTGGATTTAATGTGACTAACAGTAACCCTACCATCTGCATCAACGACCTCATC 1851
Sbjct 1909 -------------------------------------------------------------------------- 1908
Query 1852 ACAGAATACAATAAACAACACAAGGCAGAACTGAAGCCCTTAAGAGCCGATTATCTCATCGCCAGAGTCGTGAC 1925
Sbjct 1909 -------------------------------------------------------------------------- 1908
Query 1926 TGTGCTGGAGAAACTGATCAAAGAGTTTCAGGACAAAGGGCCCAACAGCGTCCTTCCCCTTTATTACCGATACT 1999
Sbjct 1909 -------------------------------------------------------------------------- 1908
Query 2000 GGGTCCACAGTGGTCAGCAAGTCCATCTGGGCAGCGCAGAGGGACCAAAGGTGTCCATCGTTGGCCTGGACGAT 2073
Sbjct 1909 -------------------------------------------------------------------------- 1908
Query 2074 TCTGGCTTCCTCCAGGTTCACCAGGAGGGCGGCGAGGTTGTGACTGTGCACCCGGACGGCAACTCCTTCGACAT 2147
Sbjct 1909 -------------------------------------------------------------------------- 1908
Query 2148 GCTGAGAAACCTCATCCTCCCCAAACGGCGG 2178
Sbjct 1909 ------------------------------- 1908
