Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06508
- Subject:
- NR_028334.1
- Aligned Length:
- 1958
- Identities:
- 1167
- Gaps:
- 676
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTAAGGCCTTTGTCCGTTGAGGTCAGGACTAGGTGGTCTCAGCCAATGGGGACAGAGCGGTCACGGGGACCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTTTGCGCGGCTCCGAGGCCTAACCAGGCAGCCGAGCCTGCCTGCGTCCCGAGGCCGCCTTCCCGGGACCTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACCCTCAGGTCCTCCGTTGGGTGGTGTTCGGGCGGCCGCCAGGCTTCCCGGCCCGCCACTCCCGCTGCCACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAAGGCGCTGCGTGCCGGCGGCTTGGTGGAGTTTCGTCGAGGCCCGGCAGGCTTGGGCCAGGAGATCCAGCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGGGCGGGGTCCCGGCTGAGAGAGGCCGATGCCGCCGTCAGTCACCGAGATGGGGTGGGGACGCTTCAAGGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGTCTGGCCAGGGGGCAGTCACAGCAGGGCCCTAGGGTAATCACTTTGATCAACATGACGAAGGACACTTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACTGAACAAGCATCACTTGACAAGCCTACAGAATCCATAAGATGGATCATTGCTTAATTTCGGGTCTTAGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTTAGATTTACCTTCAGCTTTAACAAAAAATTGGCCGTCAAAACCTGAGTCCTGTCCTCTTGCTCTCCTCCCC 592
Query 1 -------ATGAGCTTCACCACTCGCTCCACCTTCTCCACCAACTACCGGTCCCTGGGCTCTGTCCAGGCGCCCA 67
||||.||||||||||.||||||||.|||||||||||||||.||||||||||.||||||||||.||||
Sbjct 593 GGACAGCATGAACTTCACCACTTGCTCCACCCTCTCCACCAACTACCAGTCCCTGGGCACTGTCCAGGCACCCA 666
Query 68 GCTACGGCGCCCGGCCGGTCAGCAGCGCGGCCAGCGTCTATGCAGGCGCTGGGGGCTCTGGTTCCCGGATCTCC 141
|||| .|.||||.||.|||||||||.|.||||||.||||||||||||....|||||||||||||||||||||||
Sbjct 667 GCTA-TGTGCCCAGCTGGTCAGCAGTGTGGCCAGTGTCTATGCAGGCATCAGGGGCTCTGGTTCCCGGATCTCC 739
Query 142 GTGTCCCGCTCCACCAGCTTCAGGGGCGGCATGGGGTCCGGGGGCCTGGCCACCGGGATAGCCGGGGGTCTGGC 215
.|||||.|||.||||||||||..||||.|||||||||||.||||||||.||.|.|.|||.||||||||||||||
Sbjct 740 ATGTCCTGCTTCACCAGCTTCCAGGGCAGCATGGGGTCCAGGGGCCTGCCCGCAGTGATGGCCGGGGGTCTGGC 813
Query 216 AGGAATGGGAGGCATCCAGAACGAGAAGGAGACCATGCAAAGCCTGAACGACCGCCTGGCCTCTTACCTGGACA 289
|||||||||||.|||||||||.||||||||.||||||||||||||.|||||||.|||||||||.||||||||||
Sbjct 814 AGGAATGGGAGTCATCCAGAATGAGAAGGAAACCATGCAAAGCCTCAACGACCACCTGGCCTCCTACCTGGACA 887
Query 290 GAGTGAGGAGCCTGGAGACCGAGAACCGGAGGCTGGAGAGCAAAATCCGGGAGCACTTGGAGAAGAAGGGACCC 363
||||.|||||||||||.|||.|||||.|||.||||||||| ||.|||||||.|||||||||||||||||
Sbjct 888 GAGTTAGGAGCCTGGATACCAAGAACTGGAAGCTGGAGAG------CCAGGAGCACCTGGAGAAGAAGGGACCC 955
Query 364 CAGGTCAGAGACTGGAGCCATTACTTCAAGATCATCGAGGACCTGAGGGCTCAGATCTTCGCAAATACTGTGGA 437
|||||||||||||||||||||.|||||||||.|||||||.|||||||||||||||||||.||||||||||||||
Sbjct 956 CAGGTCAGAGACTGGAGCCATGACTTCAAGACCATCGAGAACCTGAGGGCTCAGATCTTTGCAAATACTGTGGA 1029
Query 438 CAATGCCCGCATCGTTCTGCAGATTGACAATGCCCGTCTTGCTGCTGATGACTTTAGAGTCAAGCATGAGACAG 511
||.|||||.|||.|||||||||||.|||||||||.|||||||||.||||||||||||.||||||.|||||||||
Sbjct 1030 CAGTGCCCACATTGTTCTGCAGATCGACAATGCCTGTCTTGCTGGTGATGACTTTAGGGTCAAGTATGAGACAG 1103
Query 512 AGCTGGCCATGCGCCAGTCTGTGGAGAACGACATCCATGGGCTCCGCAAGGTCATTGATGACACCAATATCACA 585
|||||||||||.|||||||||||||||..||||||||||||||||.||||||||||||||||||||||.||||.
Sbjct 1104 AGCTGGCCATGTGCCAGTCTGTGGAGAGTGACATCCATGGGCTCCACAAGGTCATTGATGACACCAATGTCACT 1177
Query 586 CGACTGCAGCTGGAGACAGAGATCGAGGCTCTCAAGGAGGAGCTGCTCTTCATGAAGAAGAACCACGAAGAGGA 659
.|.|||||||||||..||||||||.||||||||||||||.|||||||||||||||||||||||||.||||||||
Sbjct 1178 TGGCTGCAGCTGGAAGCAGAGATCAAGGCTCTCAAGGAGAAGCTGCTCTTCATGAAGAAGAACCATGAAGAGGA 1251
Query 660 AGTAAAAGGCCTACAAGCCCAGATTGCCAGCTCTGGGTTGACCGTGGAGGTAGATGCCCCCAAATCTCAGGACC 733
||||||.||||||.||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||
Sbjct 1252 AGTAAAGGGCCTATAAGCCCAGATTGCCAGCTCTGGGTTGACTGTGGAGGTAGATGCCCCCAAATCTCATGACC 1325
Query 734 TCGCCAAGATCATGGCAGACATCCGGGCCCAATATGACGAGCTGGCTCGGAAGAACCGAGAGGAGCTAGACAAG 807
|.|||||.|||.|||||||||| .||||||||||||||||||||||||.|||||||..|||||||||.|.||||
Sbjct 1326 TTGCCAAAATCTTGGCAGACAT-TGGGCCCAATATGACGAGCTGGCTCCGAAGAACTTAGAGGAGCTGGGCAAG 1398
Query 808 TACTGGTCTCAGCAGATTGAGGAGAGCACCACAGTGGTCACCACACAGTCTGCTGAGGTTGGAGCTGCTGAGAC 881
||||||||||.|||||||||||||||||||.||||.||||||||.||||||||.|||||||||||||||||||.
Sbjct 1399 TACTGGTCTCCGCAGATTGAGGAGAGCACCGCAGTTGTCACCACGCAGTCTGCCGAGGTTGGAGCTGCTGAGAT 1472
Query 882 GACGCTCACAGAGCTGAGACGTACAGTCCAGTCCTTGGAGATCGACCTGGACTCCATGAGAAATCTGAAGGCCA 955
|||||||||.||||||||||.|||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1473 GACGCTCACGGAGCTGAGACATACAGTCCAGTCCTTGGAGATCGACCTGGACTCCATGAGCAATCTGAAGGCCA 1546
Query 956 GCTTGGAGAACAGCCTGAGGGAGGTGGAGGCCCGCTACGCCCTACAGATGGAGCAGCTCAACGGGATCCTGCTG 1029
||||||||||||||||||||||||||||||||.|.|||.||||.|.||.|||||||||||||.|||||||||||
Sbjct 1547 GCTTGGAGAACAGCCTGAGGGAGGTGGAGGCCTGTTACACCCTGCGGACGGAGCAGCTCAACAGGATCCTGCTG 1620
Query 1030 CACCTTGAGTCAGAGCTGGCACAGACCCGGGCAGAGGGACAGCGCCAGGCCCAGGAGTATGAGGCCCTGCTGAA 1103
|||.|.|||||||||||||||||||||||||||||||||||||.|.||||||||||||||||||||||||||||
Sbjct 1621 CACTTGGAGTCAGAGCTGGCACAGACCCGGGCAGAGGGACAGCACTAGGCCCAGGAGTATGAGGCCCTGCTGAA 1694
Query 1104 CATCAAGGTCAAGCTGGAGGCTGAGATCGCCACCTACCGCCGCCTGCTGGAAGATGGCGAGGAC--------TT 1169
||||||||||||||||||||||||||||||||||||||.|||||||||||||||..|.|||||| ||
Sbjct 1695 CATCAAGGTCAAGCTGGAGGCTGAGATCGCCACCTACCACCGCCTGCTGGAAGACAGTGAGGACTTCAATCTTT 1768
Query 1170 TAATCTTGGTGATGCCTTGGACAGCAGCAACTCCATGCAAACCATCCAAAAGACCACCACCCGCCGGATAGTGG 1243
.|||||||||||||||.|||||||||||||||||||||||||||||||||||||.||||||.||||||||.|||
Sbjct 1769 CAATCTTGGTGATGCCCTGGACAGCAGCAACTCCATGCAAACCATCCAAAAGACTACCACCTGCCGGATATTGG 1842
Query 1244 ATGGCAAAGTGGTGTCTGAGACCAATGACACCAAAGTTCTGAGGCAT--------------------------- 1290
||||||||||||||||||||||||.|||..||||||||||||..|.|
Sbjct 1843 ATGGCAAAGTGGTGTCTGAGACCAGTGATGCCAAAGTTCTGATACCTTAAGCCAGCAGAAGCAGGGGACCCTTT 1916
Query 1291 ---------------------------------- 1290
Sbjct 1917 GGGGAGCAGGAGGCCAATAAAAAGTTCAGAGGTT 1950
