Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06529
- Subject:
- NR_134488.1
- Aligned Length:
- 3498
- Identities:
- 1757
- Gaps:
- 1740
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGAGCGGGGGATAAGGTTACCACGCCCGCGGTGGCCGGGGACACTCTGAGTTTCGCGTGTGGCTTTTAGGGACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTATATTTGAATTTCCCTGAACCGCCGAGTGTGGGCGGTGGCGCAGATCCGTCCCGGAAACCTCCGGGCTCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCGCCTTTCTCAGGCCCGGCCCCTCCAAGGGGTCCCCGCGGGGCGGCGGGAGGGCCCTGGGCCCAGAGCCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGGGTGGGCAGTCCCAGGCGTCCTTCCTTACAGCCCTGAGCCTGGTCCGGGAACCGCCCAGCCGGGAGGGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCTGACGGTTGCCCAAGGGCCAGATTTTAAATTTACAGGCCCGGCCCCCGAACCGCCGAAGCGCGCTGCCTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCCCATTGGCCCATGGTAGTCACGTGGAGGCGCCGGGGCGTGCCGGCCATGTTGGGGAGTGCGGCGCCGCGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGCGCCACCTCCGCCCCCCGCGGCTTGCCTCCAGCCCGCCCCTCCCGGCCCTCCTCCCCCCGCCCGCCGCTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGCAGCCTGAGAGGAAACAAAGTGCTGCGAGCAGGAGACGGCGGCGGCGCGAACCCTGCTGGGCCTCCAGTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCTCGTCTTGCATTTTCCCGCGTGCGTGTGTGAGTGGGTGTGTGTGTTTTCTTACAAAGGGTATTTCGCGATC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATCGATTGATTCGTAGTTCCCCCCCGCGCGCCTTTGCCCTTTGTGCTGTAATCGAGCTCCCGCCATCCCAGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTTCTCCGTTCCTCTAAACGCCAGCGTCTGGACGTGAGCGCAGGTCGCCGGTTTGTGCCTTCGGTCCCCGCTT 814
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 815 CGCCCCCTGCCGTCCCCTCCTTATCACGGTCCCGCTCGCGGCCTCGCCGCCCCGCTGTCTCCGCCGCCCGCCAT 888
Query 3 GGCGACTGCGACCCCCGTGCCGCCGCGGATGGGCAGCCGCGCTGGCGGCCCCACCACGCCGCTGAGCCCCACGC 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGCGACTGCGACCCCCGTGCCGCCGCGGATGGGCAGCCGCGCTGGCGGCCCCACCACGCCGCTGAGCCCCACGC 962
Query 77 GCCTGTCGCGGCTCCAGGAGAAGGAGGAGCTGCGCGAGCTCAATGACCGGCTGGCGGTGTACATCGACAAGGTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCCTGTCGCGGCTCCAGGAGAAGGAGGAGCTGCGCGAGCTCAATGACCGGCTGGCGGTGTACATCGACAAGGTG 1036
Query 151 CGCAGCCTGGAGACGGAGAACAGCGCGCTGCAGCTGCAGGTGACGGAGCGCGAGGAGGTGCGCGGCCGTGAGCT 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CGCAGCCTGGAGACGGAGAACAGCGCGCTGCAGCTGCAGGTGACGGAGCGCGAGGAGGTGCGCGGCCGTGAGCT 1110
Query 225 CACCGGCCTCAAGGCGCTCTACGAGACCGAGCTGGCCGACGCGCGACGCGCGCTCGACGACACGGCCCGCGAGC 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CACCGGCCTCAAGGCGCTCTACGAGACCGAGCTGGCCGACGCGCGACGCGCGCTCGACGACACGGCCCGCGAGC 1184
Query 299 GCGCCAAGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAACACGACCAGCTGCTCCTCAACTATGCTAAGAAG 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCGCCAAGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAACACGACCAGCTGCTCCTCAACTATGCTAAGAAG 1258
Query 373 GAATCTGATCTTAATGGCGCCCAGATCAAGCTTCGAGAATATGAAGCAGCACTGAATTCGAAAGATGCAGCTCT 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAATCTGATCTTAATGGCGCCCAGATCAAGCTTCGAGAATATGAAGCAGCACTGAATTCGAAAGATGCAGCTCT 1332
Query 447 TGCTACTGCACTTGGTGACAAAAAAAGTTTAGAGGGAGATTTGGAGGATCTGAAGGATCAGATTGCCCAGTTGG 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGCTACTGCACTTGGTGACAAAAAAAGTTTAGAGGGAGATTTGGAGGATCTGAAGGATCAGATTGCCCAGTTGG 1406
Query 521 AAGCCTCCTTAGCTGCAGCCAAAAAACAGTTAGCAGATGAAACTTTACTTAAAGTAGATTTGGAGAATCGTTGT 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAGCCTCCTTAGCTGCAGCCAAAAAACAGTTAGCAGATGAAACTTTACTTAAAGTAGATTTGGAGAATCGTTGT 1480
Query 595 CAGAGCCTTACTGAGGACTTGGAGTTTCGCAAAAGCATGTATGAAGAGGAGATTAACGAGACCAGAAGGAAGCA 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CAGAGCCTTACTGAGGACTTGGAGTTTCGCAAAAGCATGTATGAAGAGGAGATTAACGAGACCAGAAGGAAGCA 1554
Query 669 TGAAACGCGCTTGGTAGAGGTGGATTCTGGGCGTCAAATTGAGTATGAGTACAAGCTGGCGCAAGCCCTTCATG 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGAAACGCGCTTGGTAGAGGTGGATTCTGGGCGTCAAATTGAGTATGAGTACAAGCTGGCGCAAGCCCTTCATG 1628
Query 743 AGATGAGAGAGCAACATGATGCCCAAGTGAGGCTGTATAAGGAGGAGCTGGAGCAGACTTACCATGCCAAACTT 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGATGAGAGAGCAACATGATGCCCAAGTGAGGCTGTATAAGGAGGAGCTGGAGCAGACTTACCATGCCAAACTT 1702
Query 817 GAGAATGCCAGACTGTCATCAGAGATGAATACTTCTACTGTCAACAGTGCCAGGGAAGAACTGATGGAAAGCCG 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GAGAATGCCAGACTGTCATCAGAGATGAATACTTCTACTGTCAACAGTGCCAGGGAAGAACTGATGGAAAGCCG 1776
Query 891 CATGAGAATTGAGAGCCTTTCATCCCAGCTTTCTAATCTACAGAAAG--------------------------- 937
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CATGAGAATTGAGAGCCTTTCATCCCAGCTTTCTAATCTACAGAAAGAGTGTTTGTTGCTGAGTCATATCAGTT 1850
Query 938 ---------------------------------------------------AGTCTAGAGCATGTTTGGAAAGG 960
|||||||||||||||||||||||
Sbjct 1851 TCATCATGCTGCCTATTAGGCCATAAGAATTTCCTTTTGGTTAAATAACTCAGTCTAGAGCATGTTTGGAAAGG 1924
Query 961 ATTCAAGAATTAGAGGACTTGCTTGCTAAAGAAAAAGACAACTCTCGTCGCATGCTGACAGACAAAGAGAGAGA 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ATTCAAGAATTAGAGGACTTGCTTGCTAAAGAAAAAGACAACTCTCGTCGCATGCTGACAGACAAAGAGAGAGA 1998
Query 1035 GATGGCGGAAATAAGGGATCAAATGCAGCAACAGCTGAATGACTATGAACAGCTTCTTGATGTAAAGTTAGCCC 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GATGGCGGAAATAAGGGATCAAATGCAGCAACAGCTGAATGACTATGAACAGCTTCTTGATGTAAAGTTAGCCC 2072
Query 1109 TGGACATGGAAATCAGTGCTTACAGGAAACTCTTACAAGGCGAAGAAGAGAGGTTGAAGCTGTCTCCAAGCCCT 1182
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGGACATGGAAATCAGTGCTTACAGGAAACTCTTAGAAGGCGAAGAAGAGAGGTTGAAGCTGTCTCCAAGCCCT 2146
Query 1183 TCTTCCCGTGTGACAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGTACAACTAGAGGAAAGCGGAAGAGGGT 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCTTCCCGTGTGACAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGTACAACTAGAGGAAAGCGGAAGAGGGT 2220
Query 1257 TGATGTGGAAGAATCAGAGGCGAGTAGTAGTGTTAGCATCTCTCATTCCGCCTCAGCCACTGGAAATGTTTGCA 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TGATGTGGAAGAATCAGAGGCGAGTAGTAGTGTTAGCATCTCTCATTCCGCCTCAGCCACTGGAAATGTTTGCA 2294
Query 1331 TCGAAGAAATTGATGTTGATGGGAAATTTATCCGCTTGAAGAACACTTCTGAACAGGATCAACCAATGGGAGGC 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TCGAAGAAATTGATGTTGATGGGAAATTTATCCGCTTGAAGAACACTTCTGAACAGGATCAACCAATGGGAGGC 2368
Query 1405 TGGGAGATGATCAGAAAAATTGGAGACACATCAGTCAGTTATAAATATACCTCAAGATATGTGCTGAAGGCAGG 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGGGAGATGATCAGAAAAATTGGAGACACATCAGTCAGTTATAAATATACCTCAAGATATGTGCTGAAGGCAGG 2442
Query 1479 CCAGACTGTTACAATTTGGGCTGCAAACGCTGGTGTCACAGCCAGCCCCCCAACTGACCTCATCTGGAAGAACC 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CCAGACTGTTACAATTTGGGCTGCAAACGCTGGTGTCACAGCCAGCCCCCCAACTGACCTCATCTGGAAGAACC 2516
Query 1553 AGAACTCGTGGGGCACTGGCGAAGATGTGAAGGTTATATTGAAAAATTCTCAGGGAGAGGAGGTTGCTCAAAGA 1626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 AGAACTCGTGGGGCACTGGCGAAGATGTGAAGGTTATATTGAAAAATTCTCAGGGAGAGGAGGTTGCTCAAAGA 2590
Query 1627 AGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAGGAGGAAGAAGCAGCTGGAGTGGTTGTTGAGGA 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAGGAGGAAGAAGCAGCTGGAGTGGTTGTTGAGGA 2664
Query 1701 AGAACTTTTCCACCAGCAGGGAACCCCAAGAGCATCCAATAGAAGCTGTGCAATTATG---------------- 1758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 AGAACTTTTCCACCAGCAGGGAACCCCAAGAGCATCCAATAGAAGCTGTGCAATTATGTAAAATTTTCAACTGT 2738
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2739 CTTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGAAGCACAGAATATT 2812
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2813 TTTATATTTCCTTTATGTGAATTTTTAAGCTGCAAATCTGATGGCCTTAATTTCCTTTTTGACACTGAAAGTTT 2886
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2887 TGTAAAAGAAATCATGTCCATACACTTTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACT 2960
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2961 GTTCGGAAGGGGTTCCTCAAATTTTTTGACTTTTTTTGTATGTGTGTTTTTTCTTTTTTTTTAAGTTCTTATGA 3034
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 3035 GGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCCCCATCTAGACTAGCAATCTCT 3108
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 3109 TCATTATTCTCTGCTATATATAAAACGGTGCTGTGAGGGAGGGGAAAAGCATTTTTCAATATATTGAACTTTTG 3182
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 3183 TACTGAATTTTTTTGTAATAAGCAATCAAGGTTATAATTTTTTTTAAAATAGAAATTTTGTAAGAAGGCAATAT 3256
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 3257 TAACCTAATCACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTA 3330
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 3331 GATTCTTAATTCATGAGGAGGGTGGGGGAGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGT 3404
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 3405 TGTGTTTTTTAAGATAGTGTAACTTGCTTAAATTTCTTATGTGACATTAACAAATAAAAAAGCTCTTTTAATAT 3478
Query 1759 -------------------- 1758
Sbjct 3479 TGAAAAAAAAAAAAAAAAAA 3498
