Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06564
- Subject:
- XR_001780418.1
- Aligned Length:
- 2153
- Identities:
- 342
- Gaps:
- 1786
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CATCCGACGCTCGAGGACTACAAGTCTCAGCTACCCCGGCGCGGTGAGCCCGGTCACGTGTTAGGGGGCCGATC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGCGTGCGTGCCGCCGTTGATCCGGTGCTGCAGTGAGGTGGTTGTCGCCCGTGTTGTGTGTGCGTGAGTGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGAGTGAGTGAGCGAGTGAGTGAGTGTGTGCGTGGGGGCACTCGGCTTGTTGTTGTCGGTGACTTCCCCCTTC 222
Query 1 ----------------------------------------------------------ATGAGCGATAACGATG 16
||||||||||||||||
Sbjct 223 CCTCCACCCCTCCCCTCCCCGGCCGCCGCTGCAGTGGCCGCTCCCTGGGCCGTAGGAAATGAGCGATAACGATG 296
Query 17 ACATCGAGGTGGAGAGCGACGAAGAGCAACAGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCA 90
|||||||||||||||||||| ||||||||.||||||||.|||||||||
Sbjct 297 ACATCGAGGTGGAGAGCGAC---------------------------GCTGACAAGCGGGCTCACCATAATGCA 343
Query 91 CTGGAACGAAAACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGG 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 344 CTGGAACGAAAACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGG 417
Query 165 AGAGAAGGCATCCCGGGCCCAAATCCTAGACAAAGCCACAGAATATATCCAGTATATGCGAAGGAAAAACCACA 238
||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||.|
Sbjct 418 AGAGAAGGCATCCCGGGCCCAAATCCTAGACAAAGCAACAGAGTATATCCAGTATATGCGAAGGAAAAACCATA 491
Query 239 CACACCAGCAAGATATTGACGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAGCAAGGTGAGCACCCGAGC--- 309
|.|||||||||||.|||||.||||||||||||||||||||||||||||||||.|||||.||...|..||||
Sbjct 492 CGCACCAGCAAGACATTGATGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAACAAGGGGAAAGCGAGAGCTGA 565
Query 310 -------------TCGTGGG-----------------------------------------------------G 317
||.|||| |
Sbjct 566 TCAAGTTCTTTGTTCCTGGGGAATTCACTTCTCTTCCTCCCTCATGGAAGATGCAAGTAAAAGGAAATTCCGTG 639
Query 318 CAGCTG------------------GCCCTGCTG---------------TGCTC------CAGCC---------- 342
|| ||| ||||..||| |.||| |||||
Sbjct 640 CA-CTGGAGAAGGCAAGATCAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAACAGCCTCTACACCAA 712
Query 343 -----AGG-----------TCAGGCTT---TGG------------CACCT--------GGGCCTGCAGAG--TC 375
||| ||.|.||| ||| ||.|| |.|||||.|||| .|
Sbjct 713 CGCCAAGGGCGGCACCATCTCTGCCTTCGATGGGGGTTCAGACTCCAGCTCAGAATCCGAGCCTGAAGAGCCCC 786
Query 376 AGAGCCAG--------TC---ATGGAGTATGTGCTCAG------------------------------------ 402
|||| ||| || |||||| || |||
Sbjct 787 AGAG-CAGGAAGAAACTCCGGATGGAG-----GC-CAGCTAAGCCATGCGGGGCAGGCCAGCAATAAAACTGTC 853
Query 403 -------------------------------------------------------------------------- 402
Sbjct 854 GACTCTCTCGTCGCATCCTCCTTCTGTTCATCATTAGAACCCTCAGAACCATTGAGAAGACTCTTTATTTTCCT 927
Query 403 -------------------------------------------------------------------------- 402
Sbjct 928 TTTCTCTTTATTAATTGTTATTTTTGCATAGAAGCTCTTGGACAACAGCTCTCATCCCCTTCCCTGTGTCCACT 1001
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1002 ATTTTTAAATGTATTCCCTTCAGGGGTTCCTGTCCCCACCAGAAATTTTAAACCAAAACACCCCAACTTGGCAG 1075
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1076 CTCTTTCTGTGGAGGACAGACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTCC 1149
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1150 AGCCCTCAGAGCACGTGCCTGGAGGACGCCTGCTCTACCAGGCTCTCCTCCCAGTCCTCCCTCACCTCTGTTTG 1223
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1224 GTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAAGAAGACCTGATTGGAGTAATCAGAACTCACTCCCTCC 1297
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1298 TTTGTAAGGATTATTTTTTTGGAAAAGCTGTCTCTCCTGTTGAAAGACGGGATTCTTGAAGAAGTTTGTGTGGT 1371
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1372 AGAAAAGGAAAGTGGGGACAGATTTGCAGCACCCATGGCACAGTCTGTAACTTCGGCTGTTTAAGCCTGAAGAC 1445
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1446 CCAGCCTTCCAGAAGGCCACGGGACGCTGGTATGTATGTATAGGAGACGGCGGCAGTGAAACGAACGGCTCTCA 1519
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1520 GGAGTGGGGGTGGCTATGTGGGTGGGGCTGGGAGGGAGTCTTAGGTGGGGTAGAGGTTTTGTATTAAGGGCCAG 1593
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1594 TGATGATGTTTTGATATTTATTTCCTGCTACTGAAATTTGAATCTGAATGAAATGCCCCCTATTTCTGATGATG 1667
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1668 TCGATATTGTAAAGCGACAGATTCATAAAGTAATGATCAAATCTTCATTTCTTTCTGTGTGTATTTCTAAGAAA 1741
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1742 TAGAGCCAACTATTTTGTATGTAAATACCAAGAGCGACTTACCTGGTACTAAACCCACAGCCCAGTCCAGCCTC 1815
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1816 CCGCCCTGCTTCTTTCCTCCTGTCCTGGAACTTGTCGCCACTGTGTGATCCAGTCCTGGCTCTGGCTGTGGTCA 1889
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1890 GCAGATCCCAGTGAAGGGTTTCTTGTCTTGATGCTTCATTTCTTTGTCTTTTTCCTACTCTGTTGCCGGCATTT 1963
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1964 GCTGATTTCTAGTGTATACTTTGTAGTCTCAGTCGGTGTTGATTCCATTCCATGGAAATAAAGAGTATGTTGTA 2037
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2038 CATACTGCCCAAGAATTGTCCTGCAAGTTAAGGCTTCCCCCTTTACTATAAGAATATAAATAAAAACTTATTTT 2111
Query 403 ------- 402
Sbjct 2112 ATCCTTG 2118
