Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06575
- Subject:
- NM_001365211.2
- Aligned Length:
- 1529
- Identities:
- 682
- Gaps:
- 790
Alignment
Query 1 ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA 74
Query 75 GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA 148
Query 149 GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACAGAATATAATGAA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACAGAATATAATGAA 222
Query 223 CCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAA----CACAGAGGGTGCGACA 292
||||||||||||||||||||||||||||||||||||.||.| |||||.||| |..|..||.||.||.|
Sbjct 223 CCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGACTTT----AAGAAAGAAAGGCCTTAATGGTTGTGAGA 292
Query 293 GCCCAGACCCTGA----TACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGA 362
||||.||..|||| ||||| ||.||..|.|||||...|.||.||.|.||..|..|||.|.|||||.||
Sbjct 293 GCCCTGATGCTGACGATTACTT----TGAGCACAGTCCACTCTCGGAGGACAGATTCAGCAAACTAAATGAAGA 362
Query 363 -----ATTTGAT----AATATGATGCGGAATCATAAAATCGCACCTGGTCTGCCACCTCAGAACTTTTCAATGT 427
||||.|| || |.||.| |.|.|||||||||||||||||||||||||||||||
Sbjct 363 TAGTGATTTTATTTTCAA-ACGAGG--------------CCCTCCTGGTCTGCCACCTCAGAACTTTTCAATGT 421
Query 428 CTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCT 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 CTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCT 495
Query 502 TTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTC 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 TTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTC 569
Query 576 TCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGC 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 570 TCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGC 643
Query 650 CAAATGGAGCTGGAAGCAGTCCAGTGGG-GAATGGATTTGTAAACTCAAGA----GCTTCTCCAAATTTGA--- 715
|||||||||||||||||||||||||||| ..|||.|.|..||| |||| ||.|| .||||
Sbjct 644 CAAATGGAGCTGGAAGCAGTCCAGTGGGCCCATGTACTGCTAA----AAGAAGAGGCATC------CTTGAGAC 707
Query 716 --TTGGAGCTACTGGTGCAAATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTA 787
||..||| |||| ||..|.||.|||.||.| |||||.||
Sbjct 708 TTTTAAAGC-ACTG----AACGAACTCAGGAAAGG---------CAAAGACT---------------------- 745
Query 788 ATCTTGGAATGAACAGTAGGAAACCAGA-----TCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGC 856
|||| .|.||.|||||||.| ||
Sbjct 746 -TCTT--------AAATAAGAAACCAAAGAAAGTC--------------------------------------- 771
Query 857 CTCCACTAAATACCCAAAGGATCAGTAGTTCTCAAGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACA 930
Sbjct 772 -------------------------------------------------------------------------- 771
Query 931 ACCCCAAGCTTGCCTCCGCAAGGACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGAC 1004
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1005 CAGCGCTGACCTGTCAGCCCTTCAAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGC 1078
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1079 AGCAGCACCACCTAGGACAAGCAGCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTA 1152
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1153 TCCATTAATACCAACCAAAACATCAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATC 1226
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1227 GGGCTTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCC 1300
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1301 CGCAGCCCCAGCCCCGACAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGAT 1374
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1375 GGCAGTGATCGGGAGGATCCACGGGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGA 1448
Sbjct 772 -------------------------------------------------------------------------- 771
Query 1449 CAGAGAAAGCCCTTCTGTAAAGCGAATGAGGATGGACGCGTGGGTTACC 1497
Sbjct 772 ------------------------------------------------- 771