Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_06575
• Subject: XM_005254916.3
• Aligned Length: 1524
• Identities: 741
• Gaps: 762

Alignment

Query    1  ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA  74

Query   75  GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA  148

Query  149  GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACAGAATATAATGAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACAGAATATAATGAA  222

Query  223  CCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAACACAGAGGGTGCGACAGCCC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAACACAGAGGGTGCGACAGCCC  296

Query  297  AGACCCTGATACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGAATTTGATA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGACCCTGATACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGAATTTGATA  370

Query  371  ATATGATGCGGAATCATAAAATCGC------------ACCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTC  432
            |||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||
Sbjct  371  ATATGATGCGGAATCATAAAATCGCAGTGAGTACTAAACCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTC  444

Query  433  ACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGC  506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGC  518

Query  507  AGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTG  580
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTG  592

Query  581  GAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAAT  654
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAAT  666

Query  655  GGAGCTGGAAGCAGTCCAGTGGG-GAATGGATTTGTAAACTCAAGA----GCTTCTCCAAATTTGA-----TTG  718
            ||||||||||||||||||||||| ..|||.|.|..|||    ||||    ||.||      .||||     ||.
Sbjct  667  GGAGCTGGAAGCAGTCCAGTGGGCCCATGTACTGCTAA----AAGAAGAGGCATC------CTTGAGACTTTTA  730

Query  719  GAGCTACTGGTGCAAATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTT  792
            .||| ||||    ||..|.||.|||.||.|         |||||.||                       ||||
Sbjct  731  AAGC-ACTG----AACGAACTCAGGAAAGG---------CAAAGACT-----------------------TCTT  767

Query  793  GGAATGAACAGTAGGAAACCAGA-----TCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCA  861
                    .|.||.|||||||.|     ||                                            
Sbjct  768  --------AAATAAGAAACCAAAGAAAGTC--------------------------------------------  789

Query  862  CTAAATACCCAAAGGATCAGTAGTTCTCAAGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACAACCCC  935
                                                                                      
Sbjct  790  --------------------------------------------------------------------------  789

Query  936  AAGCTTGCCTCCGCAAGGACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGACCAGCG  1009
                                                                                      
Sbjct  790  --------------------------------------------------------------------------  789

Query 1010  CTGACCTGTCAGCCCTTCAAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGCAGCAG  1083
                                                                                      
Sbjct  790  --------------------------------------------------------------------------  789

Query 1084  CACCACCTAGGACAAGCAGCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTATCCAT  1157
                                                                                      
Sbjct  790  --------------------------------------------------------------------------  789

Query 1158  TAATACCAACCAAAACATCAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATCGGGCT  1231
                                                                                      
Sbjct  790  --------------------------------------------------------------------------  789

Query 1232  TCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCCCGCAG  1305
                                                                                      
Sbjct  790  --------------------------------------------------------------------------  789

Query 1306  CCCCAGCCCCGACAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGATGGCAG  1379
                                                                                      
Sbjct  790  --------------------------------------------------------------------------  789

Query 1380  TGATCGGGAGGATCCACGGGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGACAGAG  1453
                                                                                      
Sbjct  790  --------------------------------------------------------------------------  789

Query 1454  AAAGCCCTTCTGTAAAGCGAATGAGGATGGACGCGTGGGTTACC  1497
                                                        
Sbjct  790  --------------------------------------------  789