Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06698
- Subject:
- XR_949017.3
- Aligned Length:
- 3047
- Identities:
- 1363
- Gaps:
- 1683
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGCAGTGGTTGTCATGACGATGAGTGCTAGAGAAGTCAGGAAGAGGGTCCCTGTGGCCACAGGGAATAGTCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTGGCCTTTGAGGGTGGTGCTAGGGGAACTATGCCACTCTATGGCCGTGCTCGAGACCATGTCACCCATCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAATTCTGGGCACACGCCCTGGCCGACCCATGGCTGGGCCCATCACTGCAGCTGTACCTGAGAAGATCTGCAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAGCCTTCTGCTCCTGCAGTGGGGCTTTTCCCCTAGATCCCAACAATCCATCGTTAGGGCCCTTGCCCTCAAT 296
Query 1 -------------------------------ATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACAC 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAGCCACCTAAATCTGAGAACTCAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACAC 370
Query 44 TCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCAGATAGGCCTGGATGAGAGTGGTGGTGGT 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCAGATAGGCCTGGATGAGAGTGGTGGTGGT 444
Query 118 GGCGGCAGTGACCCTGGAGAGGCCCCCACACGTGCTGCTCCTGGGGAACTTCGTTCTGCACGGGGCCCACTCAG 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCGGCAGTGACCCTGGAGAGGCCCCCACACGTGCTGCTCCTGGGGAACTTCGTTCTGCACGGGGCCCACTCAG 518
Query 192 CTCTGCACCAGAGATTGTGCACGAGGACTTGAAGATGGGGTCTGATGGGGAGAGTGACCAGGCTTCAGCCACGT 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCTGCACCAGAGATTGTGCACGAGGACTTGAAGATGGGGTCTGATGGGGAGAGTGACCAGGCTTCAGCCACGT 592
Query 266 CCTCGGATGAGGTGCAGTCTCCAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAAGATCTCCACTGAGGAC 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTCGGATGAGGTGCAGTCTCCAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAAGATCTCCACTGAGGAC 666
Query 340 ATCAACAAGCGCCTATCACTACCAGCTGACATCCGGCTGCCTGAGGGCTACCTGGAGAAGCTGACCCTCAATAG 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATCAACAAGCGCCTATCACTACCAGCTGACATCCGGCTGCCTGAGGGCTACCTGGAGAAGCTGACCCTCAATAG 740
Query 414 CCCCATCTTTGACAAGCCCCTCAGCCGCCGCCTCCGTCGTGTCAGCCTATCTGAGATTGGCTTTGGGAAACTGG 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCCCATCTTTGACAAGCCCCTCAGCCGCCGCCTCCGTCGTGTCAGCCTATCTGAGATTGGCTTTGGGAAACTGG 814
Query 488 AGACCTACATTAAGCTGGACAAACTGGGCGAGGGTACCTATGCCACCGTCTACAAAGGCAAAAGCAAGCTCACA 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGACCTACATTAAGCTGGACAAACTGGGCGAGGGTACCTATGCCACCGTCTACAAAGGCAAAAGCAAGCTCACA 888
Query 562 GACAACCTTGTGGCACTCAAGGAGATCAGACTGGAACATGAAGAGGGGGCACCCTGCACCGCCATCCGGGAAGT 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GACAACCTTGTGGCACTCAAGGAGATCAGACTGGAACATGAAGAGGGGGCACCCTGCACCGCCATCCGGGAAGT 962
Query 636 GTCCCTACTCAAGGACCTCAAACACGCCAACATCGTTACGCTACATGACATTATCCACACGGAGAAGTCCCTCA 709
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTCCCTGCTCAAGGACCTCAAACACGCCAACATCGTTACGCTACATGACATTATCCACACGGAGAAGTCCCTCA 1036
Query 710 CCCTTGTCTTTGAGTACCTGGACAAGGACCTGAAGCAGTACCTGGATGACTGTGGGAACATCATCAACATGCAC 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCCTTGTCTTTGAGTACCTGGACAAGGACCTGAAGCAGTACCTGGATGACTGTGGGAACATCATCAACATGCAC 1110
Query 784 AACGTGAAACTGTTCCTGTTCCAGCTGCTCCGTGGCCTGGCCTACTGCCACCGGCAGAAGGTGCTACACCGAGA 857
|||||||||
Sbjct 1111 AACGTGAAA----------------------------------------------------------------- 1119
Query 858 CCTCAAGCCCCAGAACCTGCTCATCAACGAGAGGGGAGAGCTCAAGCTGGCTGACTTTGGCCTGGCCCGAGCCA 931
|||||||||||||||
Sbjct 1120 -----------------------------------------------------------GCCTGGCCCGAGCCA 1134
Query 932 AGTCAATCCCAACAAAGACATACTCCAATGAGGTGGTGACACTGTGGTACCGGCCCCCTGACATCCTGCTTGGG 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 AGTCAATCCCAACAAAGACATACTCCAATGAGGTGGTGACACTGTGGTACCGGCCCCCTGACATCCTGCTTGGG 1208
Query 1006 TCCACGGACTACTCCACTCAGATTGACATGTGGGGTGTGGGCTGCATCTTCTATGAGATGGCCACAGGCCGTCC 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1209 TCCACGGACTACTCCACTCAGATTGACATGTGGGGTGTGGGCTGCATCTTCTATGAGATGGCCACAGGCCGTCC 1282
Query 1080 CCTCTTTCCGGGCTCCACGGTGGAGGAACAGCTACACTTCATCTTCCGTATCTTAGGAACCCCAACTGAGGAGA 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1283 CCTCTTTCCGGGCTCCACGGTGGAGGAACAGCTACACTTCATCTTCCGTATCTTAGGAACCCCAACTGAGGAGA 1356
Query 1154 CGTGGCCAGGCATCCTGTCCAACGAGGAGTTCAAGACATACAACTACCCCAAGTACCGAGCCGAGGCCCTTTTG 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1357 CGTGGCCAGGCATCCTGTCCAACGAGGAGTTCAAGACATACAACTACCCCAAGTACCGAGCCGAGGCCCTTTTG 1430
Query 1228 AGCCACGCACCCCGACTTGATAGCGACGGGGCCGACCTCCTCACCAAGCTGTTGCAGTTTGAGGGTCGAAATCG 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1431 AGCCACGCACCCCGACTTGATAGCGACGGGGCCGACCTCCTCACCAAGCTGTTGCAGTTTGAGGGTCGAAATCG 1504
Query 1302 GATCTCCGCAGAGGATGCCATGAAACATCCATTCTTCCTCAGTCTGGGGGAGCGGATCCACAAACTTCCTGACA 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1505 GATCTCCGCAGAGGATGCCATGAAACATCCATTCTTCCTCAGTCTGGGGGAGCGGATCCACAAACTTCCTGACA 1578
Query 1376 CTACTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGAC 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1579 CTACTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGAC 1652
Query 1450 TCAGGCAGGCCAGCTTTCCGCGTGGTGGACACCGAGTTC----------------------------------- 1488
|||||||||||||||||||||||||||||||||||||||
Sbjct 1653 TCAGGCAGGCCAGCTTTCCGCGTGGTGGACACCGAGTTCTAAGCCACAGACCGAGGCCCCAGCAGGCAGCGGCT 1726
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 1727 GGAGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGCCTACCTGCCTGA 1800
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 1801 GCCATGTTCACCTGCCCACTTGTCCCCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATT 1874
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 1875 GGCCTGTCTGCTGGGTGCTAACAAAGCTCTCATCACTCCTTCACTTGGTCTGTCTGTCTCTGTCTTGGTAGTTG 1948
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 1949 CCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCAGGTCTACCCCCCATCATACCAGCCCCCAGGA 2022
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2023 CCACTACCCCACGGCCAGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACA 2096
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2097 ATGCCTTGAGTCTGAGGCATCCTCTGCCTGCTTTCCTGCCTGCCCCACCTGCCTCATATTGTGTGGGCCTTTTT 2170
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2171 TTGTTTGTTTCATTCATTGTTTTTTTTTTTTTAATTATTTTAAATGAGATTTTTGTTTTTTTTAAATGCAATAT 2244
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2245 CTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTATTTTGTGCAATGAAGCCCTG 2318
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2319 CTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTA 2392
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2393 TGGGAAAGCATGCCACAGCCACTCGCCTTCCTACCCCCGCCCGCCATCCCCAGTTGCAGGGGGATCTGGGGACT 2466
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2467 ACCAGAGACTCTGGGAAATGGACAAGGTGGGGGGCCCCACTCTTTCTCTCCTGCAGTCCCGTAGCTGGGGCCTC 2540
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2541 CTTCCTTCTCAGGGTCTCCCCAGCCCAGTCCCCTTGCTCCCATCCCACTCGGTGCTGTTGGGTAGGGGCCCTGC 2614
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2615 CAGGAACTGACCAGCTCAGCGAGGAGCCATAATGTGCATATGTGCACAAGCAGGGTTGGGGGAGGGGGGTGTGA 2688
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2689 GGGGTTGTGCCCAGGTGTTGCCCCCTATCTCCTGGGGAGGGTGAGGCAGGGCAGGGACAGTCTCCAGGGTCAGT 2762
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2763 CCCTGGATGGGTGGTTACCTCCCCTTCCTCCACCCTAAGCCCTGGGGCCCTGAAATGGGGTGGGAGGGCAGGGG 2836
Query 1489 -------------------------------------------------------------------------- 1488
Sbjct 2837 TGGGAGCCCTCCTAGTGGGTTTGGGGGGTTGGGTTCCTGAATGCACCATAATCGCTGTATGAAATATTAAAAAG 2910
Query 1489 ------------- 1488
Sbjct 2911 TCTAAAGTGAAAA 2923
