Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06819
- Subject:
- NM_011217.2
- Aligned Length:
- 1973
- Identities:
- 1086
- Gaps:
- 742
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGAGAGCGGTCGGCTTCCCTGCGCTGTGCCTGCTTCTTAATCTTCATGCTGCAGGTTGTTTTTCCAGAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAATGATCACTTTTTGGCTATTCGTCAAAAGAAGAGTTGGAAGCCGGTGTTCATTTATGACCATTCACAGGATA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAAGAAGAGCCTGGACATCGCACAAGAGGCATACAAACATAACTACCACTCCCCTTCCGAAGTTCAAATAAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACATCACCAGATTATTAATTCAGCATTTCCTAGACCTGCATATGACCCGTCTCTTAATCTGTTGGCTGAGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGATCAAGATCTTGAAATAGAAAATCTCCCAATTCCAGCAGCAAATGTGATTGTGGTGACACTGCAAATGGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAACCAAGCTGAACATAACCCTGCTTCGGATCTTCCGCCAAGGAGTAGCTGCAGCCCTGGGACTCTTACCTCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAAGTGCACATTAACCGGCTCATTGAAAAGAAGAACCAGGTTGAGTTGTTTGTGTCTCCCGGAAACCGGAAACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGAGAAACGCAGGCCCTGCAGGCTGAGGAAGTGCTGCGTTCCCTCAATGTGGATGGTTTGCATCAGAGTTTAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CACAGTTTGGAATTACAGACGTCGCCCCTGAGAAAAATGTTTTACAAGGGCAGCACGAAGCAGACAAGATCTGG 666
Query 1 ------------------------------------------------------------------ATGATTCT 8
||||||.|
Sbjct 667 AGCAAAGAAGGATTTTACGCTGTCGTCATCTTCCTCAGCATCTTTATCATCATAGTAACCTGTTTGATGATTAT 740
Query 9 TCACAGATTAAAAGAAAGATTTCAGCTTTCCTTAAGACAAGACAAAGAGAAAAACCAGGAGATCCACCTATCGC 82
|.||||.|||||||||||..||||||||||||||||||||||.|||||||||||||||||||||||||||||.|
Sbjct 741 TTACAGGTTAAAAGAAAGGCTTCAGCTTTCCTTAAGACAAGATAAAGAGAAAAACCAGGAGATCCACCTATCAC 814
Query 83 CCATCACATTACAGCCAGCACTGTCCGAGGCAAAGACAGTCCACAGCATGGTCCAACCTGAGCAGGCCCCAAAG 156
||||..||...||||.|||||..||.|||||.|||||...|||||||||||||||.||.||.|||||.||||||
Sbjct 815 CCATTGCACGGCAGCAAGCACAATCGGAGGCCAAGACGACCCACAGCATGGTCCAGCCCGATCAGGCGCCAAAG 888
Query 157 GTACTGAATGTTGTCGTGGACCCTCAAGGCCGAGGTGCTCCTGAGA-TCAAAGCTACCACCGCTACCTCTGTTT 229
||.|||||.||.||.||||||||||||||||.|.|..||||||||| ||.||.| |.||||.|.||||||||.|
Sbjct 889 GTGCTGAACGTGGTTGTGGACCCTCAAGGCCAATGCACTCCTGAGATTCGAAAC-AGCACCTCCACCTCTGTCT 961
Query 230 GCCCTTCTCCTTTCAAAATGAAGCCCATAGGACTTCAAAAGAGAAGAGGGTCCAACGTATCTCTTACATTGGAC 303
||||||||||.||||.||||||||||||||||||.||..||.||.||||.|||||.|||||||||||..|||||
Sbjct 962 GCCCTTCTCCCTTCAGAATGAAGCCCATAGGACTCCAGGAGCGACGAGGTTCCAATGTATCTCTTACGCTGGAC 1035
Query 304 ATGAGTAGCTTGGGGAACATTGAACCCTTTGT----GTCTATACCAACACCACGGGAGAAGGTAGCAATGGAGT 373
|||||||||.||||.|...|.||||||||||| |||| ||||.||.||||||||||||||.|||||.|
Sbjct 1036 ATGAGTAGCCTGGGCAGTGTGGAACCCTTTGTGGCCGTCT----CAACCCCCCGGGAGAAGGTAGCCATGGAAT 1105
Query 374 ATCTGCAGTCAGCCAGCCGAATTCTCACAAGGTCTCAGCTGAGGGACGTCGTGGCAAGTTCACATTTACTCCAA 447
|.||||||||||||||||||.||||||||.||||.||||||||||||||||||||||||||.||..||||.|||
Sbjct 1106 ACCTGCAGTCAGCCAGCCGAGTTCTCACACGGTCACAGCTGAGGGACGTCGTGGCAAGTTCCCACCTACTTCAA 1179
Query 448 AGTGAATTCATGGAAATACCAATGAACTTTGTGGATCCCAAAGAAATTGATATTCCGCGTCATGGAACTAAAAA 521
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 1180 AGTGAATTCATGGAAATACCAATGAATTTTGTGGATCCCAAAGAAATTGATATTCCACGTCACGGAACTAAAAA 1253
Query 522 TCGCTATAAGACCATTTTACCAAATCCCCTCAGCAGAGTGTGTTTAAGACCAAAAAATGTAACCGATTCATTGA 595
|||.||||||||||||||.|||||||||||||||||||||||.|||||||||||||||.||||||||||.||||
Sbjct 1254 TCGTTATAAGACCATTTTGCCAAATCCCCTCAGCAGAGTGTGCTTAAGACCAAAAAATATAACCGATTCCTTGA 1327
Query 596 GCACCTACATTAATGCTAATTATATTAGGGGCTACAGTGGCAAGGAGAAAGCCTTCATTGCCACGCAGGGCCCC 669
|.||.|||||.||||||||.||||||.|||||||||||||.|||||||||||||||||||||||.|||||||||
Sbjct 1328 GTACTTACATAAATGCTAACTATATTCGGGGCTACAGTGGTAAGGAGAAAGCCTTCATTGCCACCCAGGGCCCC 1401
Query 670 ATGATCAACACCGTGGATGATTTCTGGCAGATGGTTTGGCAGGAAGACAGCCCTGTGATTGTTATGATCACAAA 743
|||||||||||.|||.||||.||||||||||||||.|||||.||||||||.||.||||||||.||||||||.||
Sbjct 1402 ATGATCAACACTGTGAATGACTTCTGGCAGATGGTGTGGCAAGAAGACAGTCCCGTGATTGTGATGATCACGAA 1475
Query 744 ACTCAAAGAAAAAAATGAGAAATGTGTGCTATACTGGCCGGAAAAGAGAGGGATATATGGAAAAGTTGAGGTTC 817
|||||||||.||||||||||||||||||||.||||||||.||||||||||||||.||.||.||.||||||||||
Sbjct 1476 ACTCAAAGAGAAAAATGAGAAATGTGTGCTCTACTGGCCAGAAAAGAGAGGGATTTACGGCAAGGTTGAGGTTC 1549
Query 818 TGGTTATCAGTGTAAATGAATGTGATAACTACACCATTCGAAACCTTGTCTTAAAGCAAGGAAGCCACACCCAA 891
||||.|.|.||||.|..||||||||||||||||||||.||.|||||.|||||||||||||||||.|||||||||
Sbjct 1550 TGGTCACCGGTGTGACCGAATGTGATAACTACACCATCCGCAACCTCGTCTTAAAGCAAGGAAGTCACACCCAA 1623
Query 892 CATGTGAAGCATTACTGGTACACCTCATGGCCTGATCACAAGACTCCAGACAGTGCCCAGCCCCTCCTACAGCT 965
|||||||||||.|||||||||||.||||||||.|||||.||||||||||||||||||||||||||.||.|||||
Sbjct 1624 CATGTGAAGCACTACTGGTACACTTCATGGCCGGATCATAAGACTCCAGACAGTGCCCAGCCCCTTCTGCAGCT 1697
Query 966 CATGCTGGATGTAGAAGAAGACAGACTTGCTTCCCAGGGCCGAGGGCCTGTGGTTGTCCACTGCAGTGCAGGAA 1039
||||.|||||||.||||||||||||||.||.||..|.||||||||||||||||||||||||||||||||.||.|
Sbjct 1698 CATGTTGGATGTGGAAGAAGACAGACTGGCCTCTGAAGGCCGAGGGCCTGTGGTTGTCCACTGCAGTGCGGGGA 1771
Query 1040 TAGGTAGAACAGGGTGTTTTATTGCTACATCCATTGGCTGTCAACAGCTGAAAGAAGAAGGAGTTGTGGATGCA 1113
|.||.|||||.||||||||.||.|||||||||||||||||||||||..|||||||||||||||||||.||.|||
Sbjct 1772 TTGGGAGAACTGGGTGTTTCATCGCTACATCCATTGGCTGTCAACAATTGAAAGAAGAAGGAGTTGTAGACGCA 1845
Query 1114 CTAAGCATTGTCTGCCAGCTTCGTATGGATAGAGGTGGAATGGTGCAAACCAGTGAGCAGTATGAATTTGTGCA 1187
|||||.||||||||||||||||||.|.||.||.|||||.|||||.||||||||.||||||||||||||||||||
Sbjct 1846 CTAAGTATTGTCTGCCAGCTTCGTGTAGACAGGGGTGGTATGGTCCAAACCAGCGAGCAGTATGAATTTGTGCA 1919
Query 1188 CCATGCTCTGTGCCTGTATGAGAGCAGACTTTCAGCAGAGACTGTCCAG 1236
|||||||||||||||||..|||||||||||||||.||||.||||||.||
Sbjct 1920 CCATGCTCTGTGCCTGTTCGAGAGCAGACTTTCACCAGAAACTGTCGAG 1968
