Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06819
- Subject:
- XM_006513382.1
- Aligned Length:
- 1863
- Identities:
- 1085
- Gaps:
- 633
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGAGAGCGGTCGGCTTCCCTGCGCTGTGCCTGCTTCTTAATCTTCATGCTGCAGGTTGTTTTTCCAGAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAATGATCACTTTTTGGCTATTCGTCAAAAGAAGAGTTGGAAGCCGGTGTTCATTTATGACCATTCACAGGATA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAAGAAGAGCCTGGACATCGCACAAGAGGCATACAAACATAACTACCACTCCCCTTCCGAAGTTCAAATAAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACATCACCAGATTATTAATTCAGCATTTCCTAGACCTGCATATGACCCGTCTCTTAATCTGTTGGCTGAGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGATCAAGATCTTGAAATAGAAAATCTCCCAATTCCAGCAGCAAATGTGATTGTGGTGACACTGCAAATGGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAACCAAGCTGAACATAACCCTGCTTCGGATCTTCCGCCAAGGAGTAGCTGCAGCCCTGGGACTCTTACCTCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAAGTGCACATTAACCGGCTCATTGAAAAGAAGAACCAGGTTGAGTTGTTTGTGTCTCCCGGAAACCGGAAACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGAGAAACGCAGGCCCTGCAGGCTGAGGAAGTGCTGCGTTCCCTCAATGTGGATGGTTTGCATCAGAGTTTAC 592
Query 1 ------------------------------ATGATTCTTCACAGATTAAAAGAAAGATTTCAGCTTTCCTTAAG 44
| ||||.||.||||.|||||||||||..||||||||||||||||
Sbjct 593 CACAGTTTGGAATTACAGACGTCGCCCCTGA-GATTATTTACAGGTTAAAAGAAAGGCTTCAGCTTTCCTTAAG 665
Query 45 ACAAGACAAAGAGAAAAACCAGGAGATCCACCTATCGCCCATCACATTACAGCCAGCACTGTCCGAGGCAAAGA 118
||||||.|||||||||||||||||||||||||||||.|||||..||...||||.|||||..||.|||||.||||
Sbjct 666 ACAAGATAAAGAGAAAAACCAGGAGATCCACCTATCACCCATTGCACGGCAGCAAGCACAATCGGAGGCCAAGA 739
Query 119 CAGTCCACAGCATGGTCCAACCTGAGCAGGCCCCAAAGGTACTGAATGTTGTCGTGGACCCTCAAGGCCGAGGT 192
|...|||||||||||||||.||.||.|||||.||||||||.|||||.||.||.||||||||||||||||.|.|.
Sbjct 740 CGACCCACAGCATGGTCCAGCCCGATCAGGCGCCAAAGGTGCTGAACGTGGTTGTGGACCCTCAAGGCCAATGC 813
Query 193 GCTCCTGAGA-TCAAAGCTACCACCGCTACCTCTGTTTGCCCTTCTCCTTTCAAAATGAAGCCCATAGGACTTC 265
.||||||||| ||.||.| |.||||.|.||||||||.|||||||||||.||||.||||||||||||||||||.|
Sbjct 814 ACTCCTGAGATTCGAAAC-AGCACCTCCACCTCTGTCTGCCCTTCTCCCTTCAGAATGAAGCCCATAGGACTCC 886
Query 266 AAAAGAGAAGAGGGTCCAACGTATCTCTTACATTGGACATGAGTAGCTTGGGGAACATTGAACCCTTTGT---- 335
|..||.||.||||.|||||.|||||||||||..||||||||||||||.||||.|...|.|||||||||||
Sbjct 887 AGGAGCGACGAGGTTCCAATGTATCTCTTACGCTGGACATGAGTAGCCTGGGCAGTGTGGAACCCTTTGTGGCC 960
Query 336 GTCTATACCAACACCACGGGAGAAGGTAGCAATGGAGTATCTGCAGTCAGCCAGCCGAATTCTCACAAGGTCTC 409
|||| ||||.||.||||||||||||||.|||||.||.||||||||||||||||||.||||||||.||||.|
Sbjct 961 GTCT----CAACCCCCCGGGAGAAGGTAGCCATGGAATACCTGCAGTCAGCCAGCCGAGTTCTCACACGGTCAC 1030
Query 410 AGCTGAGGGACGTCGTGGCAAGTTCACATTTACTCCAAAGTGAATTCATGGAAATACCAATGAACTTTGTGGAT 483
|||||||||||||||||||||||||.||..||||.|||||||||||||||||||||||||||||.|||||||||
Sbjct 1031 AGCTGAGGGACGTCGTGGCAAGTTCCCACCTACTTCAAAGTGAATTCATGGAAATACCAATGAATTTTGTGGAT 1104
Query 484 CCCAAAGAAATTGATATTCCGCGTCATGGAACTAAAAATCGCTATAAGACCATTTTACCAAATCCCCTCAGCAG 557
||||||||||||||||||||.|||||.||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 1105 CCCAAAGAAATTGATATTCCACGTCACGGAACTAAAAATCGTTATAAGACCATTTTGCCAAATCCCCTCAGCAG 1178
Query 558 AGTGTGTTTAAGACCAAAAAATGTAACCGATTCATTGAGCACCTACATTAATGCTAATTATATTAGGGGCTACA 631
||||||.|||||||||||||||.||||||||||.|||||.||.|||||.||||||||.||||||.|||||||||
Sbjct 1179 AGTGTGCTTAAGACCAAAAAATATAACCGATTCCTTGAGTACTTACATAAATGCTAACTATATTCGGGGCTACA 1252
Query 632 GTGGCAAGGAGAAAGCCTTCATTGCCACGCAGGGCCCCATGATCAACACCGTGGATGATTTCTGGCAGATGGTT 705
||||.|||||||||||||||||||||||.||||||||||||||||||||.|||.||||.||||||||||||||.
Sbjct 1253 GTGGTAAGGAGAAAGCCTTCATTGCCACCCAGGGCCCCATGATCAACACTGTGAATGACTTCTGGCAGATGGTG 1326
Query 706 TGGCAGGAAGACAGCCCTGTGATTGTTATGATCACAAAACTCAAAGAAAAAAATGAGAAATGTGTGCTATACTG 779
|||||.||||||||.||.||||||||.||||||||.|||||||||||.||||||||||||||||||||.|||||
Sbjct 1327 TGGCAAGAAGACAGTCCCGTGATTGTGATGATCACGAAACTCAAAGAGAAAAATGAGAAATGTGTGCTCTACTG 1400
Query 780 GCCGGAAAAGAGAGGGATATATGGAAAAGTTGAGGTTCTGGTTATCAGTGTAAATGAATGTGATAACTACACCA 853
|||.||||||||||||||.||.||.||.||||||||||||||.|.|.||||.|..|||||||||||||||||||
Sbjct 1401 GCCAGAAAAGAGAGGGATTTACGGCAAGGTTGAGGTTCTGGTCACCGGTGTGACCGAATGTGATAACTACACCA 1474
Query 854 TTCGAAACCTTGTCTTAAAGCAAGGAAGCCACACCCAACATGTGAAGCATTACTGGTACACCTCATGGCCTGAT 927
|.||.|||||.|||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 1475 TCCGCAACCTCGTCTTAAAGCAAGGAAGTCACACCCAACATGTGAAGCACTACTGGTACACTTCATGGCCGGAT 1548
Query 928 CACAAGACTCCAGACAGTGCCCAGCCCCTCCTACAGCTCATGCTGGATGTAGAAGAAGACAGACTTGCTTCCCA 1001
||.||||||||||||||||||||||||||.||.|||||||||.|||||||.||||||||||||||.||.||..|
Sbjct 1549 CATAAGACTCCAGACAGTGCCCAGCCCCTTCTGCAGCTCATGTTGGATGTGGAAGAAGACAGACTGGCCTCTGA 1622
Query 1002 GGGCCGAGGGCCTGTGGTTGTCCACTGCAGTGCAGGAATAGGTAGAACAGGGTGTTTTATTGCTACATCCATTG 1075
.||||||||||||||||||||||||||||||||.||.||.||.|||||.||||||||.||.|||||||||||||
Sbjct 1623 AGGCCGAGGGCCTGTGGTTGTCCACTGCAGTGCGGGGATTGGGAGAACTGGGTGTTTCATCGCTACATCCATTG 1696
Query 1076 GCTGTCAACAGCTGAAAGAAGAAGGAGTTGTGGATGCACTAAGCATTGTCTGCCAGCTTCGTATGGATAGAGGT 1149
||||||||||..|||||||||||||||||||.||.||||||||.||||||||||||||||||.|.||.||.|||
Sbjct 1697 GCTGTCAACAATTGAAAGAAGAAGGAGTTGTAGACGCACTAAGTATTGTCTGCCAGCTTCGTGTAGACAGGGGT 1770
Query 1150 GGAATGGTGCAAACCAGTGAGCAGTATGAATTTGTGCACCATGCTCTGTGCCTGTATGAGAGCAGACTTTCAGC 1223
||.|||||.||||||||.|||||||||||||||||||||||||||||||||||||..|||||||||||||||.|
Sbjct 1771 GGTATGGTCCAAACCAGCGAGCAGTATGAATTTGTGCACCATGCTCTGTGCCTGTTCGAGAGCAGACTTTCACC 1844
Query 1224 AGAGACTGTCCAG 1236
|||.||||||.||
Sbjct 1845 AGAAACTGTCGAG 1857
