Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06826
- Subject:
- XM_017019729.2
- Aligned Length:
- 3261
- Identities:
- 1667
- Gaps:
- 1590
Alignment
Query 1 AT--GGAC---------------GACCTC-GACGCCCTGCTGGCGGACTTGGAGTCTACCACCTCCCACATCTC 56
|| |||| |||..| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGGACACTGCGTGAAGCCAAGACAGCAGACGCCCTGCTGGCGGACTTGGAGTCTACCACCTCCCACATCTC 74
Query 57 CAAACGGCCTGTGTTCTTGTCGGAGGAGACCCCCTACTCATACCCAACTGGAAACCACACATACCAGGAGATTG 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CAAACGGCCTGTGTTCTTGTCGGAGGAGACCCCCTACTCATACCCAACTGGAAACCACACATACCAGGAGATTG 148
Query 131 CCGTGCCACCCCCCGTCCCCCCACCCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGACCCCTTAGACCAG 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCGTGCCACCCCCCGTCCCCCCACCCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGACCCCTTAGACCAG 222
Query 205 TGGCAGCCCAGCGGCTCCCGATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGTGTACGGCTCCAGTGCCAA 278
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGCAGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGTGTACGGCTCCAGTGCCAA 296
Query 279 AACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAGTGGGTGAGGAGGAGCACGTCT 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAGTGGGTGAGGAGGAGCACGTCT 370
Query 353 ACAGCTTCCCCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACAGCTTCCCCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTT 444
Query 427 TCTGAACTCGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATGAGGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCTGAACTCGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATGAGGC 518
Query 501 CAACTCAAGCCCCCCGCTTCCTGGGGCCCTGAGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCCTTGGGAG 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAACTCAAGCCCCCCGCTTCCTGGGGCCCTGAGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCCTTGGGAG 592
Query 575 GCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCGGGGCCTGGAGGACGTGCGGCCCAGT 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCGGGGCCTGGAGGACGTGCGGCCCAGT 666
Query 649 GTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCGA 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCGA 740
Query 723 GATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCTCTGCCACCAGGGAGC 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCTCTGCCACCAGGGAGC 814
Query 797 TGGACGAGCTGATGGCTTCGCTGTCGGATTTCAA---------------------------------------- 830
||||||||||||||||||||||||||||||||||
Sbjct 815 TGGACGAGCTGATGGCTTCGCTGTCGGATTTCAAGACCAGCTCCTCCACTGTGGCTCTGAGTGCCCCGGGGCTG 888
Query 831 -------------------------------------------------------------------------- 830
Sbjct 889 TCCAGCTCTGCTCCGTCCTCATACTGCTCCCTTCCTCCTTCTCCTCCTCCCATGCCATCTGTATTTCTGCCACC 962
Query 831 -------------------------------------------------------------------------- 830
Sbjct 963 CACCACTATACCCTCCCCTCGAGGCCAGGGCCACACTCCGGAGTTCCCTTGTACTGAGCAGAGTGGACGAGGCC 1036
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1037 TTCTACCTCCTGTAGCCCCCAGCTGGCTTGATTTGGCTGGTCTTGGGGTGATGCCTGACACCTTCAACTCAAGG 1110
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1111 TCTCCCTCTGTGGAGGGTTCTCTGTGGGCAGTGGGCACAGAGAGTCAGGGTCGAGATTGGAGGCACCTGCCGAC 1184
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1185 CATCACAAGTGAGCTCTCTGGGGCTCCCCGCTGCCACACTGTACCCTGTGCTGGGAGCACAGCTCTCCAAGAGC 1258
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1259 CTGGGGAGCCCCAGGGGCCACCAGCCAGCCCTTCGTGCCCAGAGGAGGCCTTGGCTGCCACATGGGAGCAGCCA 1332
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1333 TGGGCTTCGGAGGTATTCGGGCCTGAGAGAATGCCCCCCTCTGGAGCTGCTCGAAGCTTCCAAGAAGTAACAGA 1406
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1407 GCCAGCTGTAGTGGCAGTGGACCGGCAGGCCATCTTCCCAGATACCTGGACTCTCACGGAGGAACATGGCCTAC 1480
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1481 AGCAGGAGAGGCCAAGGCCAGAGCCAGGGAGGCTGGGAAGCAGCTCCCCTGCCTCAGTTACCACGGAGCAGCTA 1554
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1555 GGTGCAAAGATGACCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGG 1628
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1629 CACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCA 1702
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1703 GCACCACGGAGAGGATTTCCACCTCTGGCCAGATCCGATCTGTGATCAGGAGGAGCTGGGAGTCTGGCCACGCA 1776
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1777 CACCCCATGTCCCGGGAGCCCTCCCCTCGCCGCCGGCTGGACCCTGCCACCTTGAGCAGGACCCCATCCCAGGA 1850
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1851 ACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCATCCAGCCTGAGGCAGAGGAGCCGGCGGAGGCGGCGGGGC 1924
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1925 CCTCTGCCCAGGACTGGCTGACCGAGGGCGTCATCATCACTGTGCAGCCACGTGGGAAGCGGGCCGGGGGGCAG 1998
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1999 CTCGTAGAGAAGGTTGTCTTCCCTCCTGGCTCTCCCATTCCCCTGAGAAGAACCATCTCTGTCCTGGCTTCTCC 2072
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2073 TTCTGTCCCTTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGCCCAGCCTGCTCGCCT 2146
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2147 CCTCCCCCCTGGGGCCCTCAGCTTATACCTGTGGTTCTTCTGGGGTCCAGAGTGCAGGGGAAGAGCCCCATGAT 2220
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2221 GAGGGGGTGCAGGGCCCTGCCCTTCCCATTCCTGCACCCCACACCATGAGGTCCGTGGGCTGCCAGACTGATGA 2294
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2295 GGACCCGCTCTTCCCCCCGATGCAGATCCAGGGCCTGGAGCAAAGAGCGGATGGGGAGCGGTGCTGGGCGGCCG 2368
Query 831 ----------------------------------------------------GTTCATGGCCCAGGGGAAGACA 852
||||||||||||||||||||||
Sbjct 2369 GCTGGCCTCGGGACGGCGGGCGGAGCAGCCCCGGAGGGCAGGACGAGGGAGGGTTCATGGCCCAGGGGAAGACA 2442
Query 853 GGGAGCAGCTCACCCCCTGGGGGGCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAGTC 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GGGAGCAGCTCACCCCCTGGGGGGCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAGTC 2516
Query 927 TGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGC 2590
Query 1001 AGGTTGTGACCGCCATGGGGAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGA 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AGGTTGTGACCGCCATGGGGAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGA 2664
Query 1075 TCCCGGAACTTCTTCGAGCGGGATGGACAGCCCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTG 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TCCCGGAACTTCTTCGAGCGGGATGGACAGCCCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTG 2738
Query 1149 CTACTACTGCAACGGCCCCATCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCT 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CTACTACTGCAACGGCCCCATCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCT 2812
Query 1223 TCTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAG 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TCTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAG 2886
Query 1297 GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAGCCCT 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAGCCCT 2960
Query 1371 CAACACGCTGTGGCATCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTTCTTCG 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CAACACGCTGTGGCATCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTTCTTCG 3034
Query 1445 AGCACGACGGGCAGCCCTACTGTGAGGTGCACTACCACGAGCGGCGCGGCTCGCTGTGTTCTGGCTGCCAGAAG 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 AGCACGACGGGCAGCCCTACTGTGAGGTGCACTACCACGAGCGGCGCGGCTCGCTGTGTTCTGGCTGCCAGAAG 3108
Query 1519 CCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGAGCACTTCGTCTGTGCCTTCTGCCT 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGAGCACTTCGTCTGTGCCTTCTGCCT 3182
Query 1593 CAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAGGCTCT 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 3183 CAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCT 3256
Query 1667 TCTGC 1671
|||||
Sbjct 3257 TCTGC 3261
