Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_06826
• Subject: XM_017019734.1
• Aligned Length: 2769
• Identities: 1430
• Gaps: 1203

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCTCTGCCACCAGGGAGCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGACGAGCTGATGGCTTCGCTGTCGGATTTCAAGACCAGCTCCTCCACTGTGGCTCTGAGTGCCCCGGGGCTGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCAGCTCTGCTCCGTCCTCATACTGCTCCCTTCCTCCTTCTCCTCCTCCCATGCCATCTGTATTTCTGCCACCC  222

Query    1  -------------------------------------------------------------ATGGACG------  7
                                                                         .||||||      
Sbjct  223  ACCACTATACCCTCCCCTCGAGGCCAGGGCCACACTCCGGAGTTCCCTTGTACTGAGCAGAGTGGACGAGGCCT  296

Query    8  ---ACCTC-----GACGCCCTGCTGGC-----------GGACTTGGAGT-----CTACCACCTCCCAC-----A  52
               |||||     | |.|||.||||||           ||.|||||.||     ||..|||||.|.||     .
Sbjct  297  TCTACCTCCTGTAG-CCCCCAGCTGGCTTGATTTGGCTGGTCTTGGGGTGATGCCTGACACCTTCAACTCAAGG  369

Query   53  TCTCCAAACGGC-CTGT-----GTTCT-TGTCGG-AGGAGACCCCCTACTCATACCCAACTGGAAACCACACAT  118
            |||||      | ||||     ||||| |||.|| ||                       |||   .||||.|.
Sbjct  370  TCTCC------CTCTGTGGAGGGTTCTCTGTGGGCAG-----------------------TGG---GCACAGAG  411

Query  119  A-CCAG----GAGATTGCCGTGCCACCCCCCG--------------------------TCCCC----CCAC---  154
            | .|||    |||||||  |.|.||||..|||                          |||||    ||||   
Sbjct  412  AGTCAGGGTCGAGATTG--GAGGCACCTGCCGACCATCACAAGTGAGCTCTCTGGGGCTCCCCGCTGCCACACT  483

Query  155  ---CCCCGTCCAGCGAG----GCCCTCAA------TGG--------------CACAATCCTTGACCCCTT--AG  199
               |||.||.|.|.|||    ||.|||.|      |||              |||.|.||   |.|||||  .|
Sbjct  484  GTACCCTGTGCTGGGAGCACAGCTCTCCAAGAGCCTGGGGAGCCCCAGGGGCCACCAGCC---AGCCCTTCGTG  554

Query  200  ACCAG---------TGGCAGCC---------CAGC----GGCTCCCG----ATTC------------ATCCACC  235
            .||||         ||||.|||         ||||    ||||.|.|    ||||            ||.|.||
Sbjct  555  CCCAGAGGAGGCCTTGGCTGCCACATGGGAGCAGCCATGGGCTTCGGAGGTATTCGGGCCTGAGAGAATGCCCC  628

Query  236  -------AGC-------AGCCTC-----AGTCCTCATCA---CCTG-TGTA------------CGGCTCCAGTG  274
                   |||       |||.||     |||    |.||   ||.| ||||            |||   ||| |
Sbjct  629  CCTCTGGAGCTGCTCGAAGCTTCCAAGAAGT----AACAGAGCCAGCTGTAGTGGCAGTGGACCGG---CAG-G  694

Query  275  CCAAAACTT-CCAG-----TG---TCTC------CAAC----CCT----CAGGA-----------------CAG  308
            ||  |.||| ||||     ||   ||||      .|||    |||    |||||                 |||
Sbjct  695  CC--ATCTTCCCAGATACCTGGACTCTCACGGAGGAACATGGCCTACAGCAGGAGAGGCCAAGGCCAGAGCCAG  766

Query  309  TGTTGGCT---------CTCC----------------------------GTGC------TCCCGAGTGG----G  335
             |..||||         ||||                            ||||      ..|||||.||    |
Sbjct  767  -GGAGGCTGGGAAGCAGCTCCCCTGCCTCAGTTACCACGGAGCAGCTAGGTGCAAAGATGACCGAGAGGGGAAG  839

Query  336  TGAGG-----------------------------AGGAGC----ACGTCTAC------AGCTTC--CCCA--AC  366
            ||.||                             ||||||    |.|.| ||      ||||.|  ||||  ||
Sbjct  840  TGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGC-ACCACGGAAGCTGCCACCCAGGAC  912

Query  367  AAGCAGAAATCAGC-----------TGAGCCTT-----------CACCCACCGTAATGAGCACG---------T  409
            ..|.||.|| ||||           ||.|||.|           ||||||.|      |.||||         |
Sbjct  913  GGGAAGGAA-CAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCAGC------ACCACGGAGAGGATTT  979

Query  410  CC----CTGGGCAGCAACC--TTTCTGAACTCGACCGCCTGCTGCTGGAA--CTG--AACGCTGTACA--GCAT  471
            ||    ||||.||| |.||  |.|.|||.|..||      |..|||||.|  |||  .||||   |||  .|||
Sbjct  980  CCACCTCTGGCCAG-ATCCGATCTGTGATCAGGA------GGAGCTGGGAGTCTGGCCACGC---ACACCCCAT  1043

Query  472  AACCCGCCAGGCTTCCCTGCAGATGAGGCCAACTCAAGCCCCCCGCT---TCCTGGGGCCCTGAGC----CCCC  538
            ..||||..||.|.||||               |||  |||.||.|||   .||||...||.|||||    ||||
Sbjct 1044  GTCCCGGGAGCCCTCCC---------------CTC--GCCGCCGGCTGGACCCTGCCACCTTGAGCAGGACCCC  1100

Query  539  TCTATGGTGTCCCAGAGACTAACAGCCCCTTG-GGAG--GCA----AAGCTGGGC-----CCCTGACGAAAGAG  600
                    .||||||    .||||||.|.|.| ||||  |||    ..|||||||     .||||| |..||||
Sbjct 1101  --------ATCCCAG----GAACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCATCCAGCCTGA-GGCAGAG  1161

Query  601  AAGCCTAAGCGGAATGGGGGCCGGGGC-------------CTGGAGGAC-------------------GTGCGG  642
            .||||  .|||||   ||.|.||||||             ||||..|||                   ||||.|
Sbjct 1162  GAGCC--GGCGGA---GGCGGCGGGGCCCTCTGCCCAGGACTGGCTGACCGAGGGCGTCATCATCACTGTGCAG  1230

Query  643  CCCAGT------------------------GTGGAGA-----GTCT-----------------------CTTGG  664
            ||..||                        ||.||||     ||||                       ||..|
Sbjct 1231  CCACGTGGGAAGCGGGCCGGGGGGCAGCTCGTAGAGAAGGTTGTCTTCCCTCCTGGCTCTCCCATTCCCCTGAG  1304

Query  665  ATGAA-----------CTGG------------------------AG------------------------AGCT  679
            |.|||           ||||                        ||                        ||||
Sbjct 1305  AAGAACCATCTCTGTCCTGGCTTCTCCTTCTGTCCCTTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGCT  1378

Query  680  ------CCGTGCCCAGC-------------CCCGTCCCT---GCCATCA-------------------CTGTGA  712
                  ||.||||||||             |||  ||||   |||.|||                   |||.|.
Sbjct 1379  CTTCTCCCCTGCCCAGCCTGCTCGCCTCCTCCC--CCCTGGGGCCCTCAGCTTATACCTGTGGTTCTTCTGGGG  1450

Query  713  ACCAG------GGCGA----------GATGA------GCAGCCCGCAGCGCGTC----ACCTCCACCCAACAGC  760
            .||||      ||.||          |||||      ||||..|.|.||.|.||    .|||.|||||.|||.|
Sbjct 1451  TCCAGAGTGCAGGGGAAGAGCCCCATGATGAGGGGGTGCAGGGCCCTGCCCTTCCCATTCCTGCACCCCACACC  1524

Query  761  A-----------------------------GACACGCATCT---------------------------------  772
            |                             |||.||| |||                                 
Sbjct 1525  ATGAGGTCCGTGGGCTGCCAGACTGATGAGGACCCGC-TCTTCCCCCCGATGCAGATCCAGGGCCTGGAGCAAA  1597

Query  773  ------------------------CGGCCTCCT----------------------CTGCC------------AC  788
                                    |||||..||                      |.|||            ||
Sbjct 1598  GAGCGGATGGGGAGCGGTGCTGGGCGGCCGGCTGGCCTCGGGACGGCGGGCGGAGCAGCCCCGGAGGGCAGGAC  1671

Query  789  CAGGGAG--------------CTGGACGAGCT----------------------------------GATGG---  811
            .||||||              |||||.|||.|                                  ||.||   
Sbjct 1672  GAGGGAGGGGGCTCCTGGCCCCTGGAGGAGGTTGTACTTCTTGTCTCCATCAGCTCATCTGTCCAGGAGGGAGA  1745

Query  812  ----------CTTCGCTGT---------------------------CGGATTTC--------------------  828
                      |.||.||||                           .|||.|.|                    
Sbjct 1746  AAAGTACCCCCATCCCTGTGCTGCCAGACACCGTACCCCGAGCCTCAGGAGTCCTGACCAGCCCCCTCCGTGTC  1819

Query  829  --AAGTTCATGGCCCAGGGGAAGACAGGGAGCAGCTCACCCCCTGGGGGGCCCCCGAAGCCCGGGAGCCAGCTG  900
              .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1820  CACAGTTCATGGCCCAGGGGAAGACAGGGAGCAGCTCACCCCCTGGGGGGCCCCCGAAGCCCGGGAGCCAGCTG  1893

Query  901  GACAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGG  974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1894  GACAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGG  1967

Query  975  GGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCCCGAGCACTTCGTCT  1048
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1968  GGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCCCGAGCACTTCGTCT  2041

Query 1049  GCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCCTACTGTGAAAAGGAC  1122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2042  GCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCCTACTGTGAAAAGGAC  2115

Query 1123  TACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGGATAAAGTGGTGACAGCCCTTGA  1196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2116  TACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGGATAAAGTGGTGACAGCCCTTGA  2189

Query 1197  CCGGACGTGGCACCCTGAACACTTCTTCTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGA  1270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2190  CCGGACGTGGCACCCTGAACACTTCTTCTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGA  2263

Query 1271  AGGACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCC  1344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2264  AGGACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCC  2337

Query 1345  ATCCTGGAGAACTATATCTCAGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGTGTGCCGGGAATGCTTCAC  1418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2338  ATCCTGGAGAACTATATCTCAGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGTGTGCCGGGAATGCTTCAC  2411

Query 1419  GCCATTCGTGAACGGCAGCTTCTTCGAGCACGACGGGCAGCCCTACTGTGAGGTGCACTACCACGAGCGGCGCG  1492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2412  GCCATTCGTGAACGGCAGCTTCTTCGAGCACGACGGGCAGCCCTACTGTGAGGTGCACTACCACGAGCGGCGCG  2485

Query 1493  GCTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCC  1566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2486  GCTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCC  2559

Query 1567  GAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTA  1640
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2560  GAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTA  2633

Query 1641  CTGTCAGAACTGCTTCCTCAGGCTCTTCTGC  1671
            ||||||||||||||||||||.||||||||||
Sbjct 2634  CTGTCAGAACTGCTTCCTCAAGCTCTTCTGC  2664