Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06826
- Subject:
- XM_017019735.2
- Aligned Length:
- 2574
- Identities:
- 1667
- Gaps:
- 903
Alignment
Query 1 AT--GGAC---------------GACCTC-GACGCCCTGCTGGCGGACTTGGAGTCTACCACCTCCCACATCTC 56
|| |||| |||..| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGGACACTGCGTGAAGCCAAGACAGCAGACGCCCTGCTGGCGGACTTGGAGTCTACCACCTCCCACATCTC 74
Query 57 CAAACGGCCTGTGTTCTTGTCGGAGGAGACCCCCTACTCATACCCAACTGGAAACCACACATACCAGGAGATTG 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CAAACGGCCTGTGTTCTTGTCGGAGGAGACCCCCTACTCATACCCAACTGGAAACCACACATACCAGGAGATTG 148
Query 131 CCGTGCCACCCCCCGTCCCCCCACCCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGACCCCTTAGACCAG 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCGTGCCACCCCCCGTCCCCCCACCCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGACCCCTTAGACCAG 222
Query 205 TGGCAGCCCAGCGGCTCCCGATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGTGTACGGCTCCAGTGCCAA 278
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGCAGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGTGTACGGCTCCAGTGCCAA 296
Query 279 AACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAGTGGGTGAGGAGGAGCACGTCT 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAGTGGGTGAGGAGGAGCACGTCT 370
Query 353 ACAGCTTCCCCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACAGCTTCCCCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTT 444
Query 427 TCTGAACTCGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATGAGGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCTGAACTCGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATGAGGC 518
Query 501 CAACTCAAGCCCCCCGCTTCCTGGGGCCCTGAGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCCTTGGGAG 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAACTCAAGCCCCCCGCTTCCTGGGGCCCTGAGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCCTTGGGAG 592
Query 575 GCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCGGGGCCTGGAGGACGTGCGGCCCAGT 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCGGGGCCTGGAGGACGTGCGGCCCAGT 666
Query 649 GTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCGA 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCGA 740
Query 723 GATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCTCTGCCACCAGGGAGC 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCTCTGCCACCAGGGAGC 814
Query 797 TGGACGAGCTGATGGCTTCGCTGTCGGATTTCA----------------------------------------- 829
|||||||||||||||||||||||||||||||||
Sbjct 815 TGGACGAGCTGATGGCTTCGCTGTCGGATTTCAAGACCAGCTCCTCCACTGTGGCTCTGAGTGCCCCGGGGCTG 888
Query 830 -------------------------------------------------------------------------- 829
Sbjct 889 TCCAGCTCTGCTCCGTCCTCATACTGCTCCCTTCCTCCTTCTCCTCCTCCCATGCCATCTGTATTTCTGCCACC 962
Query 830 -------------------------------------------------------------------------- 829
Sbjct 963 CACCACTATACCCTCCCCTCGAGGCCAGGGCCACACTCCGGAGTTCCCTTGTACTGAGCAGAGTGGACGAGGCC 1036
Query 830 -------------------------------------------------------------------------- 829
Sbjct 1037 TTCTACCTCCTGTAGCCCCCAGCTGGCTTGATTTGGCTGGTCTTGGGGTGATGCCTGACACCTTCAACTCAAGG 1110
Query 830 -------------------------------------------------------------------------- 829
Sbjct 1111 TCTCCCTCTGTGGAGGGTTCTCTGTGGGCAGTGGGCACAGAGAGTCAGGGTCGAGATTGGAGGCACCTGCCGAC 1184
Query 830 -------------------------------------------------------------------------- 829
Sbjct 1185 CATCACAAGTGAGCTCTCTGGGGCTCCCCGCTGCCACACTGTACCCTGTGCTGGGAGCACAGCTCTCCAAGAGC 1258
Query 830 -------------------------------------------------------------------------- 829
Sbjct 1259 CTGGGGAGCCCCAGGGGCCACCAGCCAGCCCTTCGTGCCCAGAGGAGGCCTTGGCTGCCACATGGGAGCAGCCA 1332
Query 830 -------------------------------------------------------------------------- 829
Sbjct 1333 TGGGCTTCGGAGGTATTCGGGCCTGAGAGAATGCCCCCCTCTGGAGCTGCTCGAAGCTTCCAAGAAGTAACAGA 1406
Query 830 -------------------------------------------------------------------------- 829
Sbjct 1407 GCCAGCTGTAGTGGCAGTGGACCGGCAGGCCATCTTCCCAGATACCTGGACTCTCACGGAGGAACATGGCCTAC 1480
Query 830 -------------------------------------------------------------------------- 829
Sbjct 1481 AGCAGGAGAGGCCAAGGCCAGAGCCAGGGAGGCTGGGAAGCAGCTCCCCTGCCTCAGTTACCACGGAGCAGCTA 1554
Query 830 -------------------------------------------------------------------------- 829
Sbjct 1555 GGTGCAAAGATGACCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGG 1628
Query 830 -------------------------------------------------------------------------- 829
Sbjct 1629 CACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCA 1702
Query 830 ------------------------------AGTTCATGGCCCAGGGGAAGACAGGGAGCAGCTCACCCCCTGGG 873
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GCACCACGGAGAGGATTTCCACCTCTGGCCAGTTCATGGCCCAGGGGAAGACAGGGAGCAGCTCACCCCCTGGG 1776
Query 874 GGGCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAAGCTGGGGGT 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGGCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAAGCTGGGGGT 1850
Query 948 CGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGA 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGA 1924
Query 1022 AGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGG 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGG 1998
Query 1096 GATGGACAGCCCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCAT 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GATGGACAGCCCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCAT 2072
Query 1170 CCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTTCTGTGCACAGTGTGGAGCCT 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTTCTGTGCACAGTGTGGAGCCT 2146
Query 1244 TCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACATGTTCGCA 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACATGTTCGCA 2220
Query 1318 CCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAGCCCTCAACACGCTGTGGCATCCTGA 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAGCCCTCAACACGCTGTGGCATCCTGA 2294
Query 1392 GTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTTCTTCGAGCACGACGGGCAGCCCTACT 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTTCTTCGAGCACGACGGGCAGCCCTACT 2368
Query 1466 GTGAGGTGCACTACCACGAGCGGCGCGGCTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATC 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GTGAGGTGCACTACCACGAGCGGCGCGGCTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATC 2442
Query 1540 ACCGCCATGGCCAAGAAGTTCCACCCCGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCAC 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 ACCGCCATGGCCAAGAAGTTCCACCCCGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCAC 2516
Query 1614 CTTCAAGGAGCAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAGGCTCTTCTGC 1671
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 2517 CTTCAAGGAGCAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGC 2574
