Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07106
- Subject:
- NM_001172073.1
- Aligned Length:
- 1164
- Identities:
- 873
- Gaps:
- 144
Alignment
Query 1 ATGGAACAACCTGGGCAGGATCCCACCTCAGACGACGTCATGGACTCGTTCCTGGAAAAGTTCCAGAGCCAGCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTACCGTGGCGGCTTTCATGAGGACCAGTGGGAGAAGGAATTTGAAAAGGTCCCCCTATTTATGACGAGAGCGC 148
||||..|.|||||
Sbjct 1 -------------------------------------------------------------ATGAAAAAAGCGC 13
Query 149 CATCAGAAATTGATCCCAGGGAGAATCCTGACTTGGCTTGTCTCCAGTCAATTATTTTTGATGAGGAGCGTTCT 222
|||||||||||||.|||..||||..||||||||||||.||.||||||||.||.|||||||||||.||.||.|.|
Sbjct 14 CATCAGAAATTGACCCCGAGGAGTTTCCTGACTTGGCCTGCCTCCAGTCGATGATTTTTGATGATGATCGATAT 87
Query 223 CCAGAAGAACAGGCCAAGACCTATAAAGATGAGGGCAATGATTACTTTAAAGAAAAAGACTACAAGAAAGCTGT 296
||||||||.||.|||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||
Sbjct 88 CCAGAAGAGCAAGCCAAGACCTATAAAGATGAGGGCAATGACTACTTTAAAGAAAAAGACTATAAGAAAGCTGT 161
Query 297 AATTTCATACACTGAAGGCTTAAAGAAGAAATGTGCAGATCCTGATTTGAATGCTGTCCTTTATACCAACCGGG 370
..|||||||||.||||||.||.||||||||.||||||||.||||||||||||||||||||.|||||||||||||
Sbjct 162 GCTTTCATACAGTGAAGGGTTGAAGAAGAAGTGTGCAGACCCTGATTTGAATGCTGTCCTGTATACCAACCGGG 235
Query 371 CAGCAGCACAGTACTATCTGGGCAATTTTCGTTCTGCTCTCAATGATGTGACAGCTGCCAGAAAGCTAAAACCC 444
|||||||||||||||||||.||||||.||||||||.|.||||||||||||...|||||||..||||||||.|||
Sbjct 236 CAGCAGCACAGTACTATCTCGGCAATGTTCGTTCTTCCCTCAATGATGTGCTGGCTGCCAAGAAGCTAAAGCCC 309
Query 445 TGCCACCTCAAAGCAATAATAAGAGGTGCCTTATGCCATCTGGAACTGAAACACTTTGCCGAGGCCGTGAACTG 518
.|.|||||.|||||.||.||||||||||||.|.||||||||.|||||||||||||||||.|||||.||||||||
Sbjct 310 GGTCACCTGAAAGCCATCATAAGAGGTGCCCTGTGCCATCTTGAACTGAAACACTTTGCTGAGGCTGTGAACTG 383
Query 519 GTGTGATGAGGGACTGCAAATAGATGCCAAAGAGAAGAAGCTTCTGGAAATGAGGGCTAAAGCAGACAAGCTGA 592
|||||||||||||||.|||||.|||||||||||||||||.|||||.|||||.|||||.||||||||||||||.|
Sbjct 384 GTGTGATGAGGGACTACAAATTGATGCCAAAGAGAAGAAACTTCTAGAAATAAGGGCAAAAGCAGACAAGCTAA 457
Query 593 AGCGAATTGAACAGAGGGATGTGAGGAAAGCCAACTTGAAAGAAAAGAAGGAGAGGAATCAGAATGAGGCTTTA 666
||.|.||.|||.||||||||.|||||||.||.||.|||||||||||||||||...|.||||||||||||||.|.
Sbjct 458 AGAGGATGGAAGAGAGGGATCTGAGGAAGGCAAAGTTGAAAGAAAAGAAGGAACAGCATCAGAATGAGGCTCTG 531
Query 667 CTCCAGGCCATCAAGGCTAGGAATATCAGGC---TCTCAGAAGCTGCCTGTGAGGATGAAGATTCAGCCTCAGA 737
|||||||||||||||||||||||.||||||| ||||.|||.|.|||.||||||||||||||||||||||..|
Sbjct 532 CTCCAGGCCATCAAGGCTAGGAACATCAGGCTTGTCTCTGAATCAGCCGGTGAGGATGAAGATTCAGCCTCCAA 605
Query 738 AGGTCTAGGTGAGCTTTTCCTGGATGGACTCAGCACTGAGAACCCCCATGGAGCCAGGCTGAGTCTAGATGGCC 811
.||||.||.||||.|..||||||||||.||||||.|||||||||||.|||||||||||||.|||.||||||.||
Sbjct 606 TGGTCCAGCTGAGATACTCCTGGATGGGCTCAGCTCTGAGAACCCCTATGGAGCCAGGCTAAGTATAGATGACC 679
Query 812 AGGGCAGGCTGAGCTGGCCTGTGCTCTTTCTGTACCCAGAGTATGCCCAGTCGGACTTCATCTCTGCTTTTCAT 885
|||||||||||||||||||||||||.||.||||||||.|||||.||.||.||.|||||||||||||||||||||
Sbjct 680 AGGGCAGGCTGAGCTGGCCTGTGCTGTTCCTGTACCCGGAGTACGCGCAATCAGACTTCATCTCTGCTTTTCAT 753
Query 886 GAGGACTCCAGGTTTATTGATCATCTAATGGTGATGTTTGGTGAAACACCCTCTTGGGACCTAGAGCAAAAATA 959
||||||.|||||||||||||.||||||||||.|||||||.|||||.|||||||.||||||..||||||.||.||
Sbjct 754 GAGGACACCAGGTTTATTGACCATCTAATGGCGATGTTTAGTGAAGCACCCTCCTGGGACTCAGAGCACAAGTA 827
Query 960 TTGCCCTGATAATTTGGAGGTCTACTTTGAGGATGAGGACAGGGCAGAACTATACCGGGTGCCTGCCAAGAGCA 1033
...|||.||.|||.|||||||||||||.|||||||||||||||||.||||||||||.||||.||.||.|.||||
Sbjct 828 CCACCCAGAGAATCTGGAGGTCTACTTCGAGGATGAGGACAGGGCGGAACTATACCAGGTGTCTCCCGATAGCA 901
Query 1034 CCTTGCTACAGGTTCTACAGCACCAGAGGTACTTTGTAAAAGCCCTGACACCAGCATTTTTGGTCTGTGTAGGA 1107
||.||.|.|||||.||.|||||||..||||.||..||.||.|||||.||.||.|||||..||||||||||||||
Sbjct 902 CCCTGTTGCAGGTGCTGCAGCACCCCAGGTGCTGCGTGAAGGCCCTTACCCCGGCATTCCTGGTCTGTGTAGGA 975
Query 1108 TCCTCTCCTTTTTGCAAGAATTTTCTCCGGGGGAGAAAGGTGTACCAGATACGA 1161
|||||.|||||.||.|.|||||..||||.|||||..||||||.||..|
Sbjct 976 TCCTCGCCTTTCTGTAGGAATTACCTCCAGGGGAAGAAGGTGCACAGG------ 1023