Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07157
- Subject:
- XM_005259697.4
- Aligned Length:
- 2438
- Identities:
- 1425
- Gaps:
- 796
Alignment
Query 1 ATGGGACCATTAACATTTATGGATGTGGCCATAGAATTCTGTCTGGAGGAGTGGCAATGCCTGGACATTGCACA 74
|||||.|||||...|||||..||.||||||||||||||||.|||||||||||||||.||||||||||.||||||
Sbjct 1 ATGGGGCCATTGCAATTTAGAGACGTGGCCATAGAATTCTCTCTGGAGGAGTGGCATTGCCTGGACACTGCACA 74
Query 75 GCAGAATTTATATAGGAATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGC 148
||.|||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||||||||
Sbjct 75 GCGGAATTTATATAGGAATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTTGGTATTGTTGTCTCTAAGC 148
Query 149 CAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTGGGAGCCTATGAGGAGACATGAAATGGTAGCCAAA 222
|||||||.|||||||||||||||||||.||||.|.|||| .|.|.||||.||.||||||.|||||||||||.
Sbjct 149 CAGACCTCATCACCTGTCTGGAGCAAGGAAAAAAACCTT---TGACCATGAAGAAACATGAGATGGTAGCCAAC 219
Query 223 CCCCCAGTTATGTGTTCTCATTTTACCCAAGACTTTTGGCCAGAGCAGCATATAAAAGATCCTTTCCAAAAAGC 296
|||.||||||.|||||||||||||.|||.|||..||||||||||||||...|||||||||.||||||||||||.
Sbjct 220 CCCTCAGTTACGTGTTCTCATTTTGCCCGAGATCTTTGGCCAGAGCAGAGCATAAAAGATTCTTTCCAAAAAGT 293
Query 297 GACACTGAGAAGATATAAAAACTGTGAACATAAAAATGTACATTTAAAAAAAGACCATAAAAGTGTGGATGAGT 370
||||||||||||||||.||||||.||.||||.|.|||.||||.||.|||||.|.|..|.|||||||.|||||||
Sbjct 294 GACACTGAGAAGATATGAAAACTATGGACATGACAATTTACAGTTTAAAAAGGGCTGTGAAAGTGTAGATGAGT 367
Query 371 GTAAGGTGCACAGAGGAGGTTATAATGGATTTAACCAATGTTTGCCAGCTACCCAGAGCAAAATATTTCTATTT 444
||||||||||||.|.||||||||||||||.|||||||||.||||.||.||||.||.|||||||||||||..|.|
Sbjct 368 GTAAGGTGCACAAAAGAGGTTATAATGGACTTAACCAATATTTGACAACTACTCAAAGCAAAATATTTCAGTGT 441
Query 445 GATAAATGTGTGAAAGCCTTTCATAAATTTTCAAATTCAAACAGACATAAGATAAGCCATACTGAAAAAAAACT 518
|||||||.||||||||.|.|||||||||||||||||||||||||||||||||||||.|||||||.||||||||.
Sbjct 442 GATAAATATGTGAAAGTCATTCATAAATTTTCAAATTCAAACAGACATAAGATAAGACATACTGGAAAAAAACC 515
Query 519 TTTCAAATGCAAAGAATGTGGCAAATCATTTTGCATGCTTCCACATCTAGCTCAACATAAAATAATTCATACCA 592
|||||||||
Sbjct 516 TTTCAAATG----------------------------------------------------------------- 524
Query 593 GAGTGAATTTCTGCAAATGTGAAAAATGTGGAAAAGCTTTTAACTGCCCTTCAATCATCACTAAACATAAGAGA 666
Sbjct 525 -------------------------------------------------------------------------- 524
Query 667 ATTAATACTGGAGAGAAACCCCACACATGTGAAGAATGTGGCAAAGTCTTTAATTGGTCCTCACGCCTTACTAC 740
Sbjct 525 -------------------------------------------------------------------------- 524
Query 741 ACATAAAAAAAATTATACTAGATACAAACTCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACAAGTCCTCAA 814
||| ||||||||||||||||||||||.||||.||||
Sbjct 525 -------------TAT--------------------------AGAATGTGGCAAAGCTTTTAACCAGTCTTCAA 559
Query 815 TCCTTACTACCCATAAGATAATTCGCACTGGAGAGAAATTCTACAAATGTAAAGAATGTGCCAAAGCTTTTAAC 888
.|||||||||
Sbjct 560 CCCTTACTAC---------------------------------------------------------------- 569
Query 889 CAATCCTCAAACCTTACTGAACATAAGAAAATTCATCCTGGAGAGAAACCTTACAAATGTGAAGAATGTGGCAA 962
||||||||||||||||.||||.||||||||.|.|||||||||||||||||||||
Sbjct 570 --------------------ACATAAGAAAATTCATACTGGGGAGAAACCCTTCAAATGTGAAGAATGTGGCAA 623
Query 963 AGCCTTTAACTGGCCCTCA-ACTCTTACTAAACATAAGAGAATTCATACTGGAGAGAAACCCTACACATGTGAA 1035
||||||.||||||.||||| || |||||||.|||||||||||||||||||||||||||||..||||.|||||||
Sbjct 624 AGCCTTCAACTGGTCCTCACAC-CTTACTACACATAAGAGAATTCATACTGGAGAGAAACGGTACAAATGTGAA 696
Query 1036 GAATGTGGCAAAGCCTTTAACCAGTTCTCAAACCTTACTACACATAAGAGAATCCATACTGCAGAGAAATTCTA 1109
||.||||||||||||||||.||.|||.|||.||||||||.|||||||||.|||.||||.||.|||||||..|||
Sbjct 697 GACTGTGGCAAAGCCTTTAGCCGGTTTTCATACCTTACTGCACATAAGATAATTCATAGTGGAGAGAAACCCTA 770
Query 1110 TAAATGTACAGAATGTGGTGAAGCTTTTAGCCGGTCCTCAAACCTTACTAAACATAAGAAAATTCATACTGAAA 1183
.||||||..|||||||||..|.||.||||..||.|||||.||||||||||.||||||||.|||||||||||.|.
Sbjct 771 CAAATGTGAAGAATGTGGCAAGGCCTTTAAGCGCTCCTCTAACCTTACTACACATAAGATAATTCATACTGGAG 844
Query 1184 AGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAGTGGTCCTCAAAGCTTACTGAACATAAGTTAACT 1257
|||||||||||||||||||||||||||||||.||.||||||.|.|||||.|..|||||||..||||||.|||.|
Sbjct 845 AGAAACCCTACAAATGTGAAGAATGTGGCAAGGCCTTTAAGCGCTCCTCTATCCTTACTGCGCATAAGATAATT 918
Query 1258 CATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACTGGCCCTCAACCCTTACTAAACA 1331
||||..||||||||||||||||||||||||||||||||||||||||||||....|||||...||||||||.|||
Sbjct 919 CATAGCGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAAGCACCCCTCTGTCCTTACTACACA 992
Query 1332 TAACAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGTATGTGGCAAAGCCTTTAACCAGTTCTCAAACC 1405
|||.|||||||||||||||||||||||||||||||||||||.||||||||.|||||||||..|.||||||..||
Sbjct 993 TAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAGAGCCTTTAAGTACTTCTCATCCC 1066
Query 1406 TTACTACACATAAGAGAATTCATACTGCAGAAAAACCGTACAAATGTGAAGAATGTGGCAAAGCTTTTAGCCGG 1479
||||||||||.||||.||||||||.||.|||.|||||.||||||||||||||||||||||||||.||.|.|.||
Sbjct 1067 TTACTACACACAAGATAATTCATAGTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTCAACTGG 1140
Query 1480 TCCTCAAACCTTACTAAACATAAGAAAATTCACATTGAAAAGAAACCCTACAAATGTGAAGAATGTGGCAAAGC 1553
||||||.|||||||||.||||||||.||||||.|.||.|.|||||||||||||||||||||||||||||.||||
Sbjct 1141 TCCTCACACCTTACTACACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCGAAGC 1214
Query 1554 TTTTAAGTGGTCCTCAAAGCTTACTGAACATAAGATAACTCATACTGGAGAGAAACCCTACAAATGTGAAGAAT 1627
.|||||||..|||||....||||||..|||||||||||..|||||||||.||.||||||.|||.||||||||||
Sbjct 1215 CTTTAAGTACTCCTCTTCCCTTACTACACATAAGATAATCCATACTGGACAGCAACCCTTCAAGTGTGAAGAAT 1288
Query 1628 GTGGCAAAGCTTTTAACCATTTCTCAATCCTTACCAAACATAAGAGGATTCATACTGGAGAGAAACCCTACAAG 1701
|||||||.||.|||||....|||||.||||||||.|.|||||||||.||||||||||||||||||||||||||.
Sbjct 1289 GTGGCAAGGCCTTTAAGTGCTTCTCTATCCTTACTACACATAAGAGAATTCATACTGGAGAGAAACCCTACAAA 1362
Query 1702 TGTGAAGAATGTGGCAAAGCTTTTACCCAA----TCCTCAAACCTTACTACACATAAGAAAATTCATACTGGAG 1771
||||||||||||||||||||.|| ||| ||||||.||||||||.|||||||||.||||||||||||||
Sbjct 1363 TGTGAAGAATGTGGCAAAGCCTT----CAACTCGTCCTCACACCTTACTGCACATAAGAGAATTCATACTGGAG 1432
Query 1772 AGAAATTCTACAAATGTGAAGAATGTGGCAAAGCTTTTACCCAATCTTCAAACCTTACTACACATAAAAAAATT 1845
||
Sbjct 1433 AG------------------------------------------------------------------------ 1434
Query 1846 CATACTGGAGGAAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCAGTTCTCAACTCTTACTAAACA 1919
||||||||||||||||||..|||||||||.||||||||.|..|.||..|..|||||||.|||
Sbjct 1435 ------------AAACCCTACAAATGTGAACGATGTGGCAAGGCTTTTAAGCGCTCCTTTATCCTTACTAGACA 1496
Query 1920 TAAGATAATTCACACTGAGGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAAGTGGTCCTCAACCC 1993
|||||.||||||.||||..||||||||||||||||||||||||||||||||||.|||||||||..||||.||||
Sbjct 1497 TAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGGCTTTAAGTGCCCCTCTACCC 1570
Query 1994 TTACTAAACATAAGATAA------TTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTT 2061
||||||.||||||||.|| .||.|||| ||||| |..|||
Sbjct 1571 TTACTACACATAAGAGAAGTGGCTGTCCTACT----AGAAA------------------------ACTGCT--- 1613
Query 2062 AAACTGTCCTCAACCCTTTCTACACATAAGATTATTCATACTGGAGAGAAACCCTACAAATGTGAAAAATGTGG 2135
|||.||.| ||.|.|.||||| |.|.|.||| ||||| |||
Sbjct 1614 --ACTCTCAT-----CTGTATCCACAT----TGAATAATA---------------------GTGAA-----TGG 1650
Query 2136 CAAAGCTTTTAACCGATCCTCAAACCTTATTGAACATAAGAAAATTCATACTGGAGAGCAACCCTACAAATGTG 2209
|||
Sbjct 1651 --AAG--------------------------------------------------------------------- 1653
Query 2210 AAGAATGTGGCAAAGCATTTAACTATTCCTCACACCTTAATACACATAAGAGAATTCATACTAAAGAGCAACCC 2283
Sbjct 1654 -------------------------------------------------------------------------- 1653
Query 2284 TACAAATGTAAAGAATGTGGCAAAGCTTTCAACCAATATTCAAACCTTACTACACATAACAAAATTCATACTGG 2357
Sbjct 1654 -------------------------------------------------------------------------- 1653
Query 2358 AGAGAAACTCTACAAACCTGAAGATGTGACAGTGATTTTGACAACACCTCAAACTTTTTCAAACATAAAA 2427
Sbjct 1654 ---------------------------------------------------------------------- 1653
