Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07198
- Subject:
- XM_011543013.2
- Aligned Length:
- 2341
- Identities:
- 1165
- Gaps:
- 1154
Alignment
Query 1 ATGGCGACGTCTAATCTGTTAAAGAATAAAGGTTCTCTTCAGTTTGAAGACAAATGGGATTTTATGCGCCCGAT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGACGTCTAATCTGTTAAAGAATAAAGGTTCTCTTCAGTTTGAAGACAAATGGGATTTTATGCGCCCGAT 74
Query 75 TGTTTTGAAGCTTTTACGCCAGGAATCTGTTACAAAACAGCAGTGGTTTGATCTGTTTTCGGATGTGCATGCAG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGTTTTGAAGCTTTTACGCCAGGAATCTGTTACAAAACAGCAGTGGTTTGATCTGTTTTCGGATGTGCATGCAG 148
Query 149 TCTGTCTTTGGGATGATAAAGGCCCAGCAAAAATTCATCAGGCTTTAAAAGAAGATATTCTTGAGTTTATTAAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTGTCTTTGGGATGATAAAGGCCCAGCAAAAATTCATCAGGCTTTAAAAGAAGATATTCTTGAGTTTATTAAG 222
Query 223 CAGGCACAGGCACGAGTACTGAGCCATCAAGATGATACGGCTTTGCTAAAAGCATATATTGTTGAATGGCGAAA 296
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAAGCACAGGCACGAGTACTGAGCCATCAAGATGATACGGCTTTGCTAAAAGCATATATTGTTGAATGGCGAAA 296
Query 297 GTTCTTTACACAATGTGATATTTTACCAAAACCTTTTTGTCAACTAGAGATTACTTTAATGGGTAAACAGGGCA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTTCTTTACACAATGTGATATTTTACCAAAACCTTTTTGTCAACTAGAGATTACTTTAATGGGTAAACAGGGCA 370
Query 371 GCAATAAAAAATCAAATGTGGAAGACAGTATTGTTCGAAAGCTTATGCTTGATACATGGAATGAGTCAATCTTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCAATAAAAAATCAAATGTGGAAGACAGTATTGTTCGAAAGCTTATGCTTGATACATGGAATGAGTCAATCTTT 444
Query 445 TCAAACATAAAAAACAGACTCCAAGATAGTGCAATGAAGCTGGTACATGCTGAGAGATTGGGAGAAGCTTTTGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCAAACATAAAAAACAGACTCCAAGATAGTGCAATGAAGCTGGTACATGCTGAGAGATTGGGAGAAGCTTTTGA 518
Query 519 TTCTCAGCTGGTTATTGGAGTAAGAGAATCCTATGTTAACCTTTGTTCTAATCCTGAGGATAAACTTCAAATTT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTCTCAGCTGGTTATTGGAGTAAGAGAATCCTATGTTAACCTTTGTTCTAATCCTGAGGATAAACTTCAAATTT 592
Query 593 ATAGGGACAATTTTGAGAAGGCATACTTGGATTCAACAGAGAGATTTTATAGAACACAAGCACCCTCGTATTTA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATAGGGACAATTTTGAGAAGGCATACTTGGATTCAACAGAGAGATTTTATAGAACACAAGCACCCTCGTATTTA 666
Query 667 CAACAAAATGGTGTACAGAATTATATGAAATATGCAGATGCTAAATTAAAAGAAGAAGAAAAACGAGCACTACG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAACAAAATGGTGTACAGAATTATATGAAATATGCAGATGCTAAATTAAAAGAAGAAGAAAAACGAGCACTACG 740
Query 741 TTATTTAGAAACAAGACGAGAATGTAACTCCGTTGAAGCACTCATGGAATGCTGTGTAAATGCCCTGGTGACAT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTATTTAGAAACAAGACGAGAATGTAACTCCGTTGAAGCACTCATGGAATGCTGTGTAAATGCCCTGGTGACAT 814
Query 815 CATTTAAAGAGACTATCTTAGCTGAGTGCCAAGGCATGATCAAGAGAAATGAAACTGAAAAATTACATTTAATG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CATTTAAAGAGACTATCTTAGCTGAGTGCCAAGGCATGATCAAGAGAAATGAAACTGAAAAATTACATTTAATG 888
Query 889 TTTTCATTGATGGACAAAGTTCCTAATGGTATAGAGCCAATGTTGAAAGACTTGGAGGAACATATCATTAGTGC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTTTCATTGATGGACAAAGTTCCTAATGGTATAGAGCCAATGTTGAAAGACTTGGAGGAACATATCATTAGTGC 962
Query 963 TGGCCTGGCAGATATGGTAGCAGCTGCTGAAACTATTACTACTGACTCTGAGAAATACGTTGAGCAGTTACTTA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGGCCTGGCAGATATGGTAGCAGCTGCTGAAACTATTACTACTGACTCTGAGAAATACGTTGAGCAGTTACTTA 1036
Query 1037 CACTATTTAATAGATTTAGTAAACTCGTCAAAGAAGCTTTTCAAGATGATCCACGATTTCTTACTGCAAGAGAT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CACTATTTAATAGATTTAGTAAACTCGTCAAAGAAGCTTTTCAAGATGATCCACGATTTCTTACTGCAAGAGAT 1110
Query 1111 AAGGCGTATAAAGCAGTTGTTAATGATGCTACCATATTTAAACTTGAATTACCTTTGAAGCAGAAGGGGGTGGG 1184
||| |..||| .|.||.|| |||.||...||.||..|.|||| |
Sbjct 1111 AAG-------ACCCAG--CTCAAAGA-------ATACTTCCCCTGGAGCTTCCTT------------------G 1150
Query 1185 AT-TAAAAACTCAGCCTGAATCAAAATGCCCTGAGCTGCTTGCCAATTACTGTGACATGTTGCTAAGAAAAACA 1257
|| | .|.|||| ||||...|.||| ||| ||
Sbjct 1151 ATGT------CCTGCCT-----------CCCTCCACAGCT---------------CAT--------------CA 1178
Query 1258 CCATTAAGCAAAAAACTAACCTCTGAAGAGATTGAAGCAAAGCTTAAAGAAGTGCTCTTGGTACTTAAGTATGT 1331
||| |.||||.
Sbjct 1179 CCA---------------------GCAGAGT------------------------------------------- 1188
Query 1332 ACAGAACAAAGATGTTTTTATGAGGTATCATAAAGCTCATTTGACACGACGTCTTATATTAGACATCTCTGCCG 1405
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1406 ATAGTGAAATTGAAGAAAACATGGTAGAGTGGCTAAGAGAAGTTGGTATGCCAGCGGATTATGTAAACAAGCTT 1479
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1480 GCTAGAATGTTTCAGGACATAAAAGTATCTGAAGATTTGAACCAAGCTTTTAAGGAAATGCACAAAAATAATAA 1553
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1554 ATTGGCATTACCAGCTGATTCAGTTAATATAAAAATTCTGAATGCTGGCGCCTGGTCAAGAAGTTCTGAGAAAG 1627
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1628 TCTTTGTCTCACTTCCTACTGAACTGGAGGACTTGATACCGGAAGTAGAAGAATTCTACAAAAAAAATCATAGT 1701
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1702 GGTAGAAAATTACATTGGCATCATCTCATGTCAAATGGAATTATAACATTTAAGAATGAAGTTGGTCAATATGA 1775
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1776 TTTGGAGGTAACCACGTTTCAGCTCGCTGTATTGTTTGCATGGAACCAAAGACCCAGAGAGAAAATCAGCTTTG 1849
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1850 AAAATCTTAAGCTTGCAACTGAACTCCCTGATGCTGAACTTAGGAGGACTTTATGGTCTTTAGTAGCTTTCCCA 1923
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1924 AAACTCAAACGGCAAGTTTTGTTGTATGAACCTCAAGTCAACTCACCCAAAGACTTTACAGAAGGTACCCTCTT 1997
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1998 CTCAGTGAACCAGGAGTTCAGTTTAATAAAAAATGCAAAGGTTCAGAAAAGGGGTAAAATCAACTTGATTGGAC 2071
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 2072 GTTTGCAGCTCACTACAGAAAGGATGAGAGAAGAAGAGAATGAAGGAATAGTTCAACTACGAATACTAAGAACC 2145
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 2146 CAGGAAGCTATCATACAAATAATGAAAATGAGAAAGAAAATTAGTAATGCTCAGCTGCAGACTGAATTAGTAGA 2219
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 2220 AATTTTGAAAAACATGTTCTTGCCACAAAAGAAAATGATAAAAGAGCAAATAGAGTGGCTAATAGAGCACAAAT 2293
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 2294 ACATCAGAAGAGATGAATCTGATATCAACACTTTCATATATATGGCA 2340
Sbjct 1189 ----------------------------------------------- 1188
