Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07224
Subject:
NR_160940.1
Aligned Length:
2196
Identities:
346
Gaps:
1822

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTATCAATGAGACAGCATGGCCCGTACTAAGCAGACTGCCCGCAAGTCGACCGGCGGCAAGGCCCCGAGGAAGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCTGGCTACCAAAGCGGCCCGCAAGAGCGCGCCGGCCACGGGCGGGGTGAAGAAGCCGCACCGCTACCGGCCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCACCGTGGCTCTGCGGGAGATCTGGCGCTACCAGAAGTCTACGGAGCTGCTGATCCGCAAGCTGCCCTTCCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGCTGGTACGCGAGATCGCGCAGGACTTTAAGACGGACCTGCGCTTCCAGAGCTCGGCCGTGACGGCGCTGGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCTGCAGGAGGCCAGCGAGGCCTACCTGGTGGGGCTGTTCGAAGACACGAACCTGTGCGCCATCCATGCCAAGC  370

Query    1  -----------------------------------------AT-------------GCCTGAACCTGCTAAGTC  20
                                                     ||             ||||.|    ||.||.||
Sbjct  371  GCGTGACCATCATGCCCAAGGACATCCAGTTGGTCAGCCGCATCCGCGGGGAGAGGGCCTAA----GCGAAATC  440

Query   21  CGCTCCGGCCCCTAAAAAGGGCTCCAAGAAAGCCGTCACCAAAGCCCAGAAGAAAGACGGCAAGAAGCGCAAGC  94
            ||||||.||.||.||.|||||||||||.||.||.||.|..|.||..||||||||.||||||.||||||||||||
Sbjct  441  CGCTCCTGCTCCCAAGAAGGGCTCCAAAAAGGCTGTTAAAAGAGTGCAGAAGAAGGACGGCGAGAAGCGCAAGC  514

Query   95  GCAGCCGCAAAGAGAGCTACTCCATCTACGTGTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATCTCG  168
            ||||||||||.||||||||||||.|.||||||||..||||||||||||||||||||||||||||||||||||||
Sbjct  515  GCAGCCGCAAGGAGAGCTACTCCGTTTACGTGTAGGAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATCTCG  588

Query  169  TCCAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGAGAGGCTTCCCGCCT  242
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  589  TCCAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGAGAGGCGTCCCGCCT  662

Query  243  GGCGCACTACAACAAGCGCTCCACCATCACATCCCGCGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGCG  316
            ||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||.
Sbjct  663  GGCGCACTACAACAAGCGCTCCACCATCACATCCCGTGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGCA  736

Query  317  AGCTGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCGGTCACCAAGTACACCAGCTCCAAG------------  378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.            
Sbjct  737  AGCTGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCGGTCACCAAGTACACCAGCTCGAACATTTTCTAGCTG  810

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  811  AAGTTACTGTTGTTGTCAACTACTCAGCATCCAAAATTTTCACAAGAAAACAAGGTTTTTTCTCTTCAAATTAC  884

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  885  AGTCCAAAGAGTGGCAAACAAGAAAGATGACAGAGTCCGAAGACCTTAAGATTTCTTTTCTTTGGTCAAGAACT  958

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  959  CATTACACAATGGATGATACATCTTAGGTGGTCCTACTAAAAAGAGACACAAGAATCTAGAGACTATCTCACTG  1032

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1033  TCAACCAATCCAAGGAACTTTGCTTTAGATGGCCAAAGCCAGAAACAGCAAAGTAGAAGAACTACTAGAGCTTT  1106

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1107  AAGCAGTTCCTTAGTATTTTTCCTTGGCTTATCCAAGCCTGGATACTGGTCCACTTTCCCAAAGTTGGTAAAGA  1180

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1181  GGTAATACAGCTTGGGATTGATTGGATATTGAGACAGAAAGAGAGGGGGAGAGAGAGATATCTAGGTACTGGAG  1254

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1255  CAGCACTAGGCACTCAGAAGAAGGAACACTTGGAGCAAAAAATGAAGGATATAGATTAGTGAAGTGAAGTCAGG  1328

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1329  AGCAAATGATCTCAGTTGCTTTACATGATCAAAGGACAATAACTGCAAATTGCCAGAGGGTAGGTGAAGCTCCA  1402

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1403  TATCACTTTTTAATATTAGTGTTTTAAACACCTAGGAATAGAATATACCTAAAGATAATAGCTTGATTTCCCCA  1476

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1477  CACCCACCTTTGCAATGTTTTGATTTTGCACAAGTCTTGGTTTCTAGTTTGTGGGATTATCATTTTTCATTGCA  1550

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1551  TTGAAGGAAAATTCTTTAGGCCAGGAGGGAGTCTAAGACTTCAGACACAGCACAGATACGATCCTGGGCAAGGG  1624

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1625  TCATTCAGTGTTCTTAAGAAAATTCTAAATCCTAAGGTGTGATGGTTAATATTAGGTGTCAACTTGATAGGATT  1698

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1699  AAAGGATGCCTAGATAGCTAAGTATTGTTTCTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTAACATTTG  1772

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1773  AGTCAGTGGACCAGGAGAGGAAGACTCACCCTCAATGTGGGTTGGCACCATCCAGTCGGCTGCCAGGGTAGCTA  1846

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1847  CAACAAAGCAGGAGAGAGAAGGTGGGCTAAGCTGGCTTGCAGAGTTCTGGCTTTCATCCCTCTCCTGTGCTGGA  1920

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1921  TGCCTCCATCCATTCCTCCTGCCTTTGGACATCAGACTCCAGGTTGTTTGGCCTTTGGACTCTTGGACTTAACA  1994

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1995  CCAGTGGCTTGCCTGGGGCTTTTGGGCCTTAGGCCACAGACTGAAGGCTGCACTATGGGCTTCCCTACTCTTGA  2068

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 2069  GGCTTTTGGACTCAGACTGAACCACTACTGGCTTCTTTCTTCCTCAGCTTGCAGACGGCCCACCGTAGGACATT  2142

Query  379  --------------------------------------------------  378
                                                              
Sbjct 2143  GCCTTGTAATCATGTGAGCCAATTCTCCTTAATAAACTCCTTTTAATATA  2192

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